RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 MAP1LC3AQ9H492 121 aa11.93□□□□□ -0.5
NXF1-216ENST00000533499 PHOX2AO14813 284 aa11.92□□□□□ -0.5
NXF1-216ENST00000533499 UBE2L6O14933 153 aa11.92□□□□□ -0.5
NXF1-216ENST00000533499 KIR2DL4Q99706 377 aa11.92□□□□□ -0.5
NXF1-216ENST00000533499 TMEM243Q9BU79 118 aa11.92□□□□□ -0.5
NXF1-216ENST00000533499 SMIM2Q9BVW6 85 aa11.92□□□□□ -0.5
NXF1-216ENST00000533499 LAMTOR2Q9Y2Q5 125 aa11.92□□□□□ -0.5
NXF1-216ENST00000533499 VPS13DQ5THJ4 4388 aa11.92□□□□□ -0.5
NXF1-216ENST00000533499 A0A087WX48 190 aa11.91□□□□□ -0.5
NXF1-216ENST00000533499 DNAH1Q9P2D7 4330 aa11.91□□□□□ -0.5
NXF1-216ENST00000533499 TRBV27A0A0K0K1C4 114 aa11.9□□□□□ -0.5
NXF1-216ENST00000533499 NBDYA0A0U1RRE5 68 aa11.9□□□□□ -0.5
NXF1-216ENST00000533499 TSHBP01222 138 aa11.9□□□□□ -0.5
NXF1-216ENST00000533499 IQCJQ1A5X6 159 aa11.9□□□□□ -0.5
NXF1-216ENST00000533499 Q8N3U1 123 aa11.9□□□□□ -0.5
NXF1-216ENST00000533499 TRAV9-2A0A087WT02 112 aa11.89□□□□□ -0.51
NXF1-216ENST00000533499 TCAPO15273 167 aa11.89□□□□□ -0.51
NXF1-216ENST00000533499 RAB5AP20339 215 aa11.89□□□□□ -0.51
NXF1-216ENST00000533499 NIT1Q86X76 327 aa11.89□□□□□ -0.51
NXF1-216ENST00000533499 ALKBH7Q9BT30 221 aaPredicted RBP11.89□□□□□ -0.51
NXF1-216ENST00000533499 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.88□□□□□ -0.51
NXF1-216ENST00000533499 IGKV2-29A2NJV5 120 aaPredicted RBP11.88□□□□□ -0.51
NXF1-216ENST00000533499 COLCA2A8K830 154 aa11.88□□□□□ -0.51
NXF1-216ENST00000533499 DNAH10OSP0CZ25 163 aa11.88□□□□□ -0.51
NXF1-216ENST00000533499 TTC32Q5I0X7 151 aa11.88□□□□□ -0.51
NXF1-216ENST00000533499 LINC01556Q5JQF7 62 aa11.87□□□□□ -0.51
NXF1-216ENST00000533499 AMMECR1LQ6DCA0 310 aa11.87□□□□□ -0.51
NXF1-216ENST00000533499 RNASEKQ6P5S7 137 aaKnown RBP11.87□□□□□ -0.51
NXF1-216ENST00000533499 PRSS3P2Q8NHM4 247 aa11.87□□□□□ -0.51
NXF1-216ENST00000533499 PKIAP61925 76 aa11.86□□□□□ -0.51
NXF1-216ENST00000533499 RPL32P62910 135 aaKnown RBP11.86□□□□□ -0.51
NXF1-216ENST00000533499 MPV17L2Q567V2 206 aa11.86□□□□□ -0.51
NXF1-216ENST00000533499 Q8N8P6 123 aa11.86□□□□□ -0.51
NXF1-216ENST00000533499 SACSQ9NZJ4 4579 aa11.85□□□□□ -0.51
NXF1-216ENST00000533499 IFI27P40305 119 aaPredicted RBP11.85□□□□□ -0.51
NXF1-216ENST00000533499 Q8N976 141 aa11.85□□□□□ -0.51
NXF1-216ENST00000533499 CHCHD7Q9BUK0 85 aa11.85□□□□□ -0.51
NXF1-216ENST00000533499 KLK12Q9UKR0 248 aa11.85□□□□□ -0.51
NXF1-216ENST00000533499 KMT2CQ8NEZ4 4911 aaKnown RBP11.85□□□□□ -0.51
NXF1-216ENST00000533499 TRGC2P03986 189 aa11.84□□□□□ -0.51
NXF1-216ENST00000533499 RBX1P62877 108 aa11.84□□□□□ -0.51
NXF1-216ENST00000533499 C10orf126Q8N4M7 172 aa11.84□□□□□ -0.51
NXF1-216ENST00000533499 KRTAP1-5Q9BYS1 174 aa11.84□□□□□ -0.51
NXF1-216ENST00000533499 NXT2Q9NPJ8 142 aaKnown RBP11.84□□□□□ -0.51
NXF1-216ENST00000533499 ANGP03950 147 aaKnown RBP11.83□□□□□ -0.52
NXF1-216ENST00000533499 FA2HQ7L5A8 372 aa11.83□□□□□ -0.52
NXF1-216ENST00000533499 Q9HAA7 133 aa11.83□□□□□ -0.52
NXF1-216ENST00000533499 FGF6P10767 208 aa11.82□□□□□ -0.52
NXF1-216ENST00000533499 ESDP10768 282 aa11.82□□□□□ -0.52
NXF1-216ENST00000533499 DGAT2L7PQ6IED9 249 aa11.82□□□□□ -0.52
NXF1-216ENST00000533499 CLPSL2Q6UWE3 100 aa11.82□□□□□ -0.52
NXF1-216ENST00000533499 Q6ZR54 194 aa11.82□□□□□ -0.52
NXF1-216ENST00000533499 TMEM18Q96B42 140 aa11.82□□□□□ -0.52
NXF1-216ENST00000533499 RYR2Q92736 4967 aa11.82□□□□□ -0.52
NXF1-216ENST00000533499 HYDINQ4G0P3 5121 aa11.81□□□□□ -0.52
NXF1-216ENST00000533499 PRSS47A8MTI9 375 aa11.81□□□□□ -0.52
NXF1-216ENST00000533499 UBE2WQ96B02 151 aa11.81□□□□□ -0.52
NXF1-216ENST00000533499 TMEM101Q96IK0 257 aa11.81□□□□□ -0.52
NXF1-216ENST00000533499 IGKV3OR2-268A0A0C4DH90 116 aa11.8□□□□□ -0.52
NXF1-216ENST00000533499 CRPP02741 224 aa11.8□□□□□ -0.52
NXF1-216ENST00000533499 LAGE3Q14657 143 aa11.8□□□□□ -0.52
NXF1-216ENST00000533499 C1orf134Q5TEV5 83 aa11.8□□□□□ -0.52
NXF1-216ENST00000533499 C20orf203Q8NBC4 194 aa11.8□□□□□ -0.52
NXF1-216ENST00000533499 C18orf32Q8TCD1 76 aa11.8□□□□□ -0.52
NXF1-216ENST00000533499 DNAH6Q9C0G6 4158 aa11.79□□□□□ -0.52
NXF1-216ENST00000533499 IGLV4-60A0A075B6I1 120 aa11.79□□□□□ -0.52
NXF1-216ENST00000533499 H7C423 109 aa11.79□□□□□ -0.52
NXF1-216ENST00000533499 K7EP13 123 aa11.79□□□□□ -0.52
NXF1-216ENST00000533499 RPL39P62891 51 aaKnown RBP11.79□□□□□ -0.52
NXF1-216ENST00000533499 ORMDL2Q53FV1 153 aa11.79□□□□□ -0.52
NXF1-216ENST00000533499 C6orf223Q8N319 242 aa11.79□□□□□ -0.52
NXF1-216ENST00000533499 OR5A1Q8NGJ0 315 aa11.79□□□□□ -0.52
NXF1-216ENST00000533499 IBA57-AS1B1ANH7 110 aa11.78□□□□□ -0.52
NXF1-216ENST00000533499 BTF3P20290 206 aaKnown RBP11.78□□□□□ -0.52
NXF1-216ENST00000533499 SMAGPQ0VAQ4 97 aa11.78□□□□□ -0.52
NXF1-216ENST00000533499 LINC00269Q8N2A0 174 aa11.78□□□□□ -0.52
NXF1-216ENST00000533499 KMT2AQ03164 3969 aa11.77□□□□□ -0.52
NXF1-216ENST00000533499 BAGE3Q86Y29 109 aa11.77□□□□□ -0.53
NXF1-216ENST00000533499 A0A1B0GUV1 79 aa11.76□□□□□ -0.53
NXF1-216ENST00000533499 CYSLTR1Q9Y271 337 aa11.76□□□□□ -0.53
NXF1-216ENST00000533499 TRAV8-3A0A0A6YYJ7 113 aa11.75□□□□□ -0.53
NXF1-216ENST00000533499 K7EMI3 77 aa11.75□□□□□ -0.53
NXF1-216ENST00000533499 ZNF25P17030 456 aaPredicted RBP11.75□□□□□ -0.53
NXF1-216ENST00000533499 RAB5BP61020 215 aa11.75□□□□□ -0.53
NXF1-216ENST00000533499 C2orf66Q6UXQ4 117 aa11.75□□□□□ -0.53
NXF1-216ENST00000533499 UBE2D4Q9Y2X8 147 aa11.75□□□□□ -0.53
NXF1-216ENST00000533499 IGKV2D-24A0A075B6R9 120 aa11.74□□□□□ -0.53
NXF1-216ENST00000533499 PSCAO43653 123 aa11.74□□□□□ -0.53
NXF1-216ENST00000533499 LINC00614P0C842 121 aa11.74□□□□□ -0.53
NXF1-216ENST00000533499 REG3AQ06141 175 aa11.74□□□□□ -0.53
NXF1-216ENST00000533499 RNASE13Q5GAN3 156 aaKnown RBP11.74□□□□□ -0.53
NXF1-216ENST00000533499 NFE4Q86UQ8 179 aa11.74□□□□□ -0.53
NXF1-216ENST00000533499 AP5S1Q9NUS5 200 aa11.74□□□□□ -0.53
NXF1-216ENST00000533499 G0S2P27469 103 aa11.73□□□□□ -0.53
NXF1-216ENST00000533499 Q0VG73 95 aa11.73□□□□□ -0.53
NXF1-216ENST00000533499 ENHOQ6UWT2 76 aa11.73□□□□□ -0.53
NXF1-216ENST00000533499 MRPL52Q86TS9 123 aaKnown RBP11.73□□□□□ -0.53
NXF1-216ENST00000533499 RMI2Q96E14 147 aa11.73□□□□□ -0.53
NXF1-216ENST00000533499 IGLV10-54A0A075B6I4 117 aa11.72□□□□□ -0.53
NXF1-216ENST00000533499 PMCHL1Q16048 86 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms