RNA–Protein interactions for RNA: ENST00000533333.5

PAX6-228, Transcript of paired box 6, humanhuman

TSL 2

Gene PAX6, Length 6,173 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-228ENST00000533333 COL4A6Q14031 1691 aa13.35□□□□□ -0.27
PAX6-228ENST00000533333 H7C423 109 aa13.35□□□□□ -0.27
PAX6-228ENST00000533333 PRR4Q16378 134 aa13.35□□□□□ -0.27
PAX6-228ENST00000533333 SPANXB1Q9NS25 103 aaPredicted RBP13.34□□□□□ -0.27
PAX6-228ENST00000533333 ATP5EP2Q5VTU8 51 aa13.34□□□□□ -0.27
PAX6-228ENST00000533333 IGFL2Q6UWQ7 119 aa13.33□□□□□ -0.27
PAX6-228ENST00000533333 CREBBPQ92793 2442 aa13.33□□□□□ -0.28
PAX6-228ENST00000533333 LOXL1Q08397 574 aaPredicted RBP13.32□□□□□ -0.28
PAX6-228ENST00000533333 ZFAND3Q9H8U3 227 aa13.32□□□□□ -0.28
PAX6-228ENST00000533333 MIFP14174 115 aa13.32□□□□□ -0.28
PAX6-228ENST00000533333 UQCRQO14949 82 aa13.31□□□□□ -0.28
PAX6-228ENST00000533333 X6R8D5 127 aa13.31□□□□□ -0.28
PAX6-228ENST00000533333 COA6Q5JTJ3 125 aaKnown RBP13.31□□□□□ -0.28
PAX6-228ENST00000533333 SPATA12Q7Z6I5 190 aa13.31□□□□□ -0.28
PAX6-228ENST00000533333 PLAC8L1A1L4L8 177 aa13.31□□□□□ -0.28
PAX6-228ENST00000533333 PRYO14603 147 aa13.31□□□□□ -0.28
PAX6-228ENST00000533333 IBA57-AS1B1ANH7 110 aa13.3□□□□□ -0.28
PAX6-228ENST00000533333 C6orf99Q4VX62 202 aa13.3□□□□□ -0.28
PAX6-228ENST00000533333 CDKN2A-AS1Q9UH64 79 aa13.3□□□□□ -0.28
PAX6-228ENST00000533333 TICRRQ7Z2Z1 1910 aa13.3□□□□□ -0.28
PAX6-228ENST00000533333 NCKAP5O14513 1909 aa13.3□□□□□ -0.28
PAX6-228ENST00000533333 SNURFQ9Y675 71 aa13.3□□□□□ -0.28
PAX6-228ENST00000533333 TNFRSF13BO14836 293 aaPredicted RBP13.29□□□□□ -0.28
PAX6-228ENST00000533333 DHRS4-AS1Q9P1J3 65 aa13.29□□□□□ -0.28
PAX6-228ENST00000533333 CACNA1HO95180 2353 aa13.29□□□□□ -0.28
PAX6-228ENST00000533333 LINC01548A6NM66 108 aa13.29□□□□□ -0.28
PAX6-228ENST00000533333 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.29□□□□□ -0.28
PAX6-228ENST00000533333 DEFB114Q30KQ6 69 aa13.29□□□□□ -0.28
PAX6-228ENST00000533333 RPL37AP8A6NKH3 93 aa13.28□□□□□ -0.28
PAX6-228ENST00000533333 IGLV1-47P01700 117 aa13.28□□□□□ -0.28
PAX6-228ENST00000533333 E7EUB6 86 aa13.28□□□□□ -0.28
PAX6-228ENST00000533333 NEXN-AS1Q8NBZ9 246 aa13.28□□□□□ -0.28
PAX6-228ENST00000533333 TRBV6-8A0A0A6YYG3 113 aa13.28□□□□□ -0.28
PAX6-228ENST00000533333 Q6YL49 198 aa13.27□□□□□ -0.28
PAX6-228ENST00000533333 FAM19A3Q7Z5A8 133 aa13.27□□□□□ -0.28
PAX6-228ENST00000533333 LRRC75A-AS1Q8N1F1 130 aa13.27□□□□□ -0.28
PAX6-228ENST00000533333 IGF1P05019 195 aa13.27□□□□□ -0.29
PAX6-228ENST00000533333 RNASE8Q8TDE3 154 aaKnown RBP13.27□□□□□ -0.29
PAX6-228ENST00000533333 CCDC140Q96MF4 163 aa13.27□□□□□ -0.29
PAX6-228ENST00000533333 KIAA1671Q9BY89 1806 aa13.26□□□□□ -0.29
PAX6-228ENST00000533333 LOC107984640A0A0U1RRK4 108 aa13.26□□□□□ -0.29
PAX6-228ENST00000533333 LINC00308Q8TCZ7 52 aa13.26□□□□□ -0.29
PAX6-228ENST00000533333 ODF3Q96PU9 254 aa13.26□□□□□ -0.29
PAX6-228ENST00000533333 FAM30AQ9NZY2 134 aa13.25□□□□□ -0.29
PAX6-228ENST00000533333 TRBV27A0A0K0K1C4 114 aa13.25□□□□□ -0.29
PAX6-228ENST00000533333 BBC3Q96PG8 261 aaPredicted RBP13.25□□□□□ -0.29
PAX6-228ENST00000533333 M0R378 163 aa13.25□□□□□ -0.29
PAX6-228ENST00000533333 ATP5EP56381 51 aaPredicted RBP13.25□□□□□ -0.29
PAX6-228ENST00000533333 LINC00526Q96FQ7 95 aa13.25□□□□□ -0.29
PAX6-228ENST00000533333 SBF1O95248 1867 aa13.24□□□□□ -0.29
PAX6-228ENST00000533333 IGF2-ASQ6U949 168 aa13.24□□□□□ -0.29
PAX6-228ENST00000533333 SPRY4Q9C004 299 aa13.24□□□□□ -0.29
PAX6-228ENST00000533333 PCNX2A6NKB5 2137 aa13.24□□□□□ -0.29
PAX6-228ENST00000533333 ZNF80P51504 273 aaPredicted RBP13.24□□□□□ -0.29
PAX6-228ENST00000533333 TMEM223A0PJW6 202 aa13.24□□□□□ -0.29
PAX6-228ENST00000533333 Q8N976 141 aa13.24□□□□□ -0.29
PAX6-228ENST00000533333 IGLV4-69A0A075B6H9 119 aa13.23□□□□□ -0.29
PAX6-228ENST00000533333 MT-ATP8P03928 68 aa13.23□□□□□ -0.29
PAX6-228ENST00000533333 SIP14410 1827 aa13.22□□□□□ -0.29
PAX6-228ENST00000533333 CFAP126Q5VTH2 177 aa13.22□□□□□ -0.29
PAX6-228ENST00000533333 WDR81Q562E7 1941 aa13.22□□□□□ -0.29
PAX6-228ENST00000533333 NDUFC1O43677 76 aa13.22□□□□□ -0.29
PAX6-228ENST00000533333 KPRPQ5T749 579 aaPredicted RBP13.22□□□□□ -0.29
PAX6-228ENST00000533333 GPR179Q6PRD1 2367 aa13.21□□□□□ -0.29
PAX6-228ENST00000533333 IGLV4-3A0A075B6K6 122 aa13.21□□□□□ -0.29
PAX6-228ENST00000533333 NUPR2A6NF83 97 aa13.21□□□□□ -0.29
PAX6-228ENST00000533333 Q6ZQY7 126 aa13.21□□□□□ -0.29
PAX6-228ENST00000533333 LINC00474Q9P2X8 69 aa13.21□□□□□ -0.29
PAX6-228ENST00000533333 C19orf71A6NCJ1 209 aa13.21□□□□□ -0.3
PAX6-228ENST00000533333 K7EQG2 157 aa13.21□□□□□ -0.3
PAX6-228ENST00000533333 TRBV6-5A0A0K0K1A5 114 aa13.2□□□□□ -0.3
PAX6-228ENST00000533333 ZNF22P17026 224 aaPredicted RBP13.2□□□□□ -0.3
PAX6-228ENST00000533333 KRTAP27-1Q3LI81 207 aa13.2□□□□□ -0.3
PAX6-228ENST00000533333 TRBV6-4A0A1B0GX49 114 aa13.2□□□□□ -0.3
PAX6-228ENST00000533333 CIRBP-AS1Q8TBR5 109 aa13.2□□□□□ -0.3
PAX6-228ENST00000533333 ZGRF1Q86YA3 2104 aa13.2□□□□□ -0.3
PAX6-228ENST00000533333 TNCP24821 2201 aa13.2□□□□□ -0.3
PAX6-228ENST00000533333 RETNLBQ9BQ08 111 aa13.2□□□□□ -0.3
PAX6-228ENST00000533333 TNRC6AQ8NDV7 1962 aaKnown RBP13.19□□□□□ -0.3
PAX6-228ENST00000533333 MALRD1Q5VYJ5 2156 aa13.19□□□□□ -0.3
PAX6-228ENST00000533333 C10orf25Q5T742 122 aa13.19□□□□□ -0.3
PAX6-228ENST00000533333 FRMD6-AS1P0C7T7 363 aa13.19□□□□□ -0.3
PAX6-228ENST00000533333 MYLKQ15746 1914 aa13.19□□□□□ -0.3
PAX6-228ENST00000533333 TIMM17BO60830 172 aa13.19□□□□□ -0.3
PAX6-228ENST00000533333 C20orf173Q96LM9 149 aa13.18□□□□□ -0.3
PAX6-228ENST00000533333 TRIAP1O43715 76 aa13.18□□□□□ -0.3
PAX6-228ENST00000533333 ESRGQ1W209 222 aa13.18□□□□□ -0.3
PAX6-228ENST00000533333 CLUHP3Q96NS8 147 aa13.18□□□□□ -0.3
PAX6-228ENST00000533333 LY6G6DO95868 133 aa13.17□□□□□ -0.3
PAX6-228ENST00000533333 PROK1P58294 105 aa13.17□□□□□ -0.3
PAX6-228ENST00000533333 TSC2P49815 1807 aa13.16□□□□□ -0.3
PAX6-228ENST00000533333 CD164L2Q6UWJ8 174 aa13.16□□□□□ -0.3
PAX6-228ENST00000533333 PLA2G2EQ9NZK7 142 aa13.16□□□□□ -0.3
PAX6-228ENST00000533333 RBX1P62877 108 aa13.16□□□□□ -0.3
PAX6-228ENST00000533333 Q6ZSV7 163 aa13.16□□□□□ -0.3
PAX6-228ENST00000533333 C19orf84I3L1E1 186 aa13.15□□□□□ -0.3
PAX6-228ENST00000533333 LMO4P61968 165 aa13.15□□□□□ -0.3
PAX6-228ENST00000533333 PLXND1Q9Y4D7 1925 aa13.15□□□□□ -0.3
PAX6-228ENST00000533333 FSHBP01225 129 aa13.15□□□□□ -0.3
PAX6-228ENST00000533333 C22orf34Q6ZV56 151 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms