RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 ZNF479Q96JC4 524 aa11.12□□□□□ -0.63
CACNA1E-208ENST00000533229 LINC00467Q9BRT7 94 aa11.12□□□□□ -0.63
CACNA1E-208ENST00000533229 TNFRSF18Q9Y5U5 241 aa11.12□□□□□ -0.63
CACNA1E-208ENST00000533229 A0A0J9YXV3 536 aa11.11□□□□□ -0.63
CACNA1E-208ENST00000533229 SRSF9Q13242 221 aaKnown RBP eCLIP11.11□□□□□ -0.63
CACNA1E-208ENST00000533229 C1orf158Q8N1D5 194 aa11.11□□□□□ -0.63
CACNA1E-208ENST00000533229 TEX29Q8N6K0 151 aa11.11□□□□□ -0.63
CACNA1E-208ENST00000533229 PTH2Q96A98 100 aa11.11□□□□□ -0.63
CACNA1E-208ENST00000533229 VCX2Q9H322 139 aa11.11□□□□□ -0.63
CACNA1E-208ENST00000533229 TMEM223A0PJW6 202 aa11.1□□□□□ -0.63
CACNA1E-208ENST00000533229 J3QQQ9 107 aa11.1□□□□□ -0.63
CACNA1E-208ENST00000533229 ZNF22P17026 224 aaPredicted RBP11.1□□□□□ -0.63
CACNA1E-208ENST00000533229 LINC01006Q8NI28 216 aa11.1□□□□□ -0.63
CACNA1E-208ENST00000533229 ITPR2Q14571 2701 aa11.1□□□□□ -0.63
CACNA1E-208ENST00000533229 IGHV3OR16-12A0A075B7B8 117 aa11.09□□□□□ -0.63
CACNA1E-208ENST00000533229 WFDC2Q14508 124 aa11.09□□□□□ -0.63
CACNA1E-208ENST00000533229 BEAN1Q3B7T3 259 aa11.09□□□□□ -0.63
CACNA1E-208ENST00000533229 IGHV3-64A0A075B6Q5 118 aa11.09□□□□□ -0.63
CACNA1E-208ENST00000533229 TRAV25A0A0B4J276 109 aa11.09□□□□□ -0.63
CACNA1E-208ENST00000533229 RHODO00212 210 aa11.09□□□□□ -0.63
CACNA1E-208ENST00000533229 RRN3P1Q2M238 152 aa11.09□□□□□ -0.63
CACNA1E-208ENST00000533229 RNASE13Q5GAN3 156 aaKnown RBP11.09□□□□□ -0.63
CACNA1E-208ENST00000533229 STHQ8IWL8 128 aa11.09□□□□□ -0.63
CACNA1E-208ENST00000533229 MTURNQ8N3F0 131 aa11.09□□□□□ -0.63
CACNA1E-208ENST00000533229 CLUHP3Q96NS8 147 aa11.09□□□□□ -0.63
CACNA1E-208ENST00000533229 CHCHD7Q9BUK0 85 aa11.09□□□□□ -0.63
CACNA1E-208ENST00000533229 YAE1D1Q9NRH1 226 aa11.09□□□□□ -0.63
CACNA1E-208ENST00000533229 PYGO1Q9Y3Y4 419 aa11.09□□□□□ -0.63
CACNA1E-208ENST00000533229 MTORP42345 2549 aa11.09□□□□□ -0.63
CACNA1E-208ENST00000533229 IGHV3-38A0A0C4DH36 116 aa11.08□□□□□ -0.64
CACNA1E-208ENST00000533229 SPXQ9BT56 116 aa11.08□□□□□ -0.64
CACNA1E-208ENST00000533229 NACAE9PAV3 2078 aa11.08□□□□□ -0.64
CACNA1E-208ENST00000533229 H3BMG7 143 aa11.08□□□□□ -0.64
CACNA1E-208ENST00000533229 IGHV3-53P01767 116 aa11.08□□□□□ -0.64
CACNA1E-208ENST00000533229 UBE2D1P51668 147 aa11.08□□□□□ -0.64
CACNA1E-208ENST00000533229 RS1O15537 224 aa11.07□□□□□ -0.64
CACNA1E-208ENST00000533229 SLC25A29Q8N8R3 303 aa11.07□□□□□ -0.64
CACNA1E-208ENST00000533229 SPANXB1Q9NS25 103 aaPredicted RBP11.07□□□□□ -0.64
CACNA1E-208ENST00000533229 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.06□□□□□ -0.64
CACNA1E-208ENST00000533229 IGKV2-29A2NJV5 120 aaPredicted RBP11.06□□□□□ -0.64
CACNA1E-208ENST00000533229 TMEM238C9JI98 176 aa11.06□□□□□ -0.64
CACNA1E-208ENST00000533229 IGHV3-30P01768 117 aa11.06□□□□□ -0.64
CACNA1E-208ENST00000533229 IGHV3-30-5P0DP03 117 aa11.06□□□□□ -0.64
CACNA1E-208ENST00000533229 TSSC4Q9Y5U2 329 aaPredicted RBP11.06□□□□□ -0.64
CACNA1E-208ENST00000533229 LEPROTO15243 131 aa11.06□□□□□ -0.64
CACNA1E-208ENST00000533229 LGALS3P17931 250 aaKnown RBP11.06□□□□□ -0.64
CACNA1E-208ENST00000533229 PGPEP1Q9NXJ5 209 aa11.06□□□□□ -0.64
CACNA1E-208ENST00000533229 UBE2D4Q9Y2X8 147 aa11.06□□□□□ -0.64
CACNA1E-208ENST00000533229 RNASE1P07998 156 aaKnown RBP11.05□□□□□ -0.64
CACNA1E-208ENST00000533229 SH2D6Q7Z4S9 175 aa11.05□□□□□ -0.64
CACNA1E-208ENST00000533229 FASNP49327 2511 aaKnown RBP11.05□□□□□ -0.64
CACNA1E-208ENST00000533229 MRPS36P82909 103 aaKnown RBP11.05□□□□□ -0.64
CACNA1E-208ENST00000533229 IL17DQ8TAD2 202 aa11.05□□□□□ -0.64
CACNA1E-208ENST00000533229 HELZ2Q9BYK8 2649 aaKnown RBP11.05□□□□□ -0.64
CACNA1E-208ENST00000533229 SETXQ7Z333 2677 aaKnown RBP11.04□□□□□ -0.64
CACNA1E-208ENST00000533229 TMEM238LA0A1B0GVL6 79 aa11.04□□□□□ -0.64
CACNA1E-208ENST00000533229 A6NJY4 79 aa11.04□□□□□ -0.64
CACNA1E-208ENST00000533229 PLA2G2AP14555 144 aa11.04□□□□□ -0.64
CACNA1E-208ENST00000533229 WFDC10AQ9H1F0 79 aa11.04□□□□□ -0.64
CACNA1E-208ENST00000533229 C16orf95Q9H693 158 aa11.04□□□□□ -0.64
CACNA1E-208ENST00000533229 PRO0461Q9UI25 63 aa11.04□□□□□ -0.64
CACNA1E-208ENST00000533229 APOMO95445 188 aa11.03□□□□□ -0.64
CACNA1E-208ENST00000533229 BAHCC1Q9P281 2608 aa11.03□□□□□ -0.64
CACNA1E-208ENST00000533229 UNC79Q9P2D8 2635 aa11.03□□□□□ -0.64
CACNA1E-208ENST00000533229 TRGV1A0A0A0MS02 117 aa11.03□□□□□ -0.64
CACNA1E-208ENST00000533229 F8W1H4 67 aa11.03□□□□□ -0.64
CACNA1E-208ENST00000533229 GIG44P09565 113 aaPredicted RBP11.03□□□□□ -0.64
CACNA1E-208ENST00000533229 C10orf126Q8N4M7 172 aa11.03□□□□□ -0.64
CACNA1E-208ENST00000533229 JMJD1CQ15652 2540 aa11.02□□□□□ -0.64
CACNA1E-208ENST00000533229 TRAV8-3A0A0A6YYJ7 113 aa11.02□□□□□ -0.64
CACNA1E-208ENST00000533229 ETDBQ3ZM63 59 aa11.02□□□□□ -0.64
CACNA1E-208ENST00000533229 SFTA2Q6UW10 78 aa11.02□□□□□ -0.64
CACNA1E-208ENST00000533229 NDUFA11Q86Y39 141 aa11.02□□□□□ -0.64
CACNA1E-208ENST00000533229 DNAJC30Q96LL9 226 aa11.02□□□□□ -0.64
CACNA1E-208ENST00000533229 TSPAN13O95857 204 aa11.02□□□□□ -0.65
CACNA1E-208ENST00000533229 CFC1BP0CG36 223 aa11.02□□□□□ -0.65
CACNA1E-208ENST00000533229 CFC1P0CG37 223 aa11.02□□□□□ -0.65
CACNA1E-208ENST00000533229 IGHV3-30-3P0DP02 117 aa11.02□□□□□ -0.65
CACNA1E-208ENST00000533229 CRYBA4P53673 196 aa11.02□□□□□ -0.65
CACNA1E-208ENST00000533229 Q6ZTI0 123 aa11.02□□□□□ -0.65
CACNA1E-208ENST00000533229 Q6ZUT4 128 aa11.02□□□□□ -0.65
CACNA1E-208ENST00000533229 ADARB2-AS1A8MUL3 147 aa11□□□□□ -0.65
CACNA1E-208ENST00000533229 J3QKU1 62 aa11□□□□□ -0.65
CACNA1E-208ENST00000533229 INSL3P51460 131 aa11□□□□□ -0.65
CACNA1E-208ENST00000533229 SMR3AQ99954 134 aa11□□□□□ -0.65
CACNA1E-208ENST00000533229 GTSF1LQ9H1H1 148 aa11□□□□□ -0.65
CACNA1E-208ENST00000533229 SPANXA1Q9NS26 97 aa11□□□□□ -0.65
CACNA1E-208ENST00000533229 GAGE13Q4V321 117 aa11□□□□□ -0.65
CACNA1E-208ENST00000533229 A8MZ25 164 aa10.99□□□□□ -0.65
CACNA1E-208ENST00000533229 C19orf73Q9NVV2 129 aa10.99□□□□□ -0.65
CACNA1E-208ENST00000533229 GCN1Q92616 2671 aaKnown RBP10.99□□□□□ -0.65
CACNA1E-208ENST00000533229 EIF4EBP3O60516 100 aaPredicted RBP10.99□□□□□ -0.65
CACNA1E-208ENST00000533229 IGLV1-51P01701 117 aa10.99□□□□□ -0.65
CACNA1E-208ENST00000533229 TMEM263Q8WUH6 116 aaKnown RBP10.99□□□□□ -0.65
CACNA1E-208ENST00000533229 TIMM21Q9BVV7 248 aa10.99□□□□□ -0.65
CACNA1E-208ENST00000533229 A0A0J9YXY3 114 aa10.98□□□□□ -0.65
CACNA1E-208ENST00000533229 TINCRA0A1B0GVN0 87 aa10.98□□□□□ -0.65
CACNA1E-208ENST00000533229 HILS1P60008 231 aa10.97□□□□□ -0.65
CACNA1E-208ENST00000533229 NOP10Q9NPE3 64 aaKnown RBP10.97□□□□□ -0.65
CACNA1E-208ENST00000533229 NOTCH3Q9UM47 2321 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms