RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 KMT2CQ8NEZ4 4911 aaKnown RBP7.75□□□□□ -1.17
TRAPPC4-211ENST00000533012 TRAV26-2A0A0B4J265 109 aa7.74□□□□□ -1.17
TRAPPC4-211ENST00000533012 SCGB1D1O95968 90 aa7.74□□□□□ -1.17
TRAPPC4-211ENST00000533012 LINC00694P0DN24 101 aa7.74□□□□□ -1.17
TRAPPC4-211ENST00000533012 UBE2D3P61077 147 aa7.74□□□□□ -1.17
TRAPPC4-211ENST00000533012 UBE2D2P62837 147 aa7.74□□□□□ -1.17
TRAPPC4-211ENST00000533012 MRAP2Q96G30 205 aa7.74□□□□□ -1.17
TRAPPC4-211ENST00000533012 RNF185Q96GF1 192 aa7.74□□□□□ -1.17
TRAPPC4-211ENST00000533012 UPK3BQ9BT76 320 aa7.74□□□□□ -1.17
TRAPPC4-211ENST00000533012 Q9H8V8 135 aa7.74□□□□□ -1.17
TRAPPC4-211ENST00000533012 TRAV8-6A0A0B4J262 113 aa7.73□□□□□ -1.17
TRAPPC4-211ENST00000533012 RNASEKQ6P5S7 137 aaKnown RBP7.73□□□□□ -1.17
TRAPPC4-211ENST00000533012 DAZ4Q86SG3 579 aaKnown RBP7.73□□□□□ -1.17
TRAPPC4-211ENST00000533012 ORMDL3Q8N138 153 aa7.73□□□□□ -1.17
TRAPPC4-211ENST00000533012 DAZ3Q9NR90 486 aaKnown RBP7.73□□□□□ -1.17
TRAPPC4-211ENST00000533012 NACAE9PAV3 2078 aa7.73□□□□□ -1.17
TRAPPC4-211ENST00000533012 C20orf202A1L168 122 aa7.72□□□□□ -1.17
TRAPPC4-211ENST00000533012 PPP1R17O96001 155 aa7.72□□□□□ -1.17
TRAPPC4-211ENST00000533012 MRPL51Q4U2R6 128 aaKnown RBP7.72□□□□□ -1.17
TRAPPC4-211ENST00000533012 LELP1Q5T871 98 aa7.72□□□□□ -1.17
TRAPPC4-211ENST00000533012 FA2HQ7L5A8 372 aa7.72□□□□□ -1.17
TRAPPC4-211ENST00000533012 LYSTQ99698 3801 aa7.72□□□□□ -1.17
TRAPPC4-211ENST00000533012 IGHV3-38A0A0C4DH36 116 aa7.71□□□□□ -1.18
TRAPPC4-211ENST00000533012 SIVA1O15304 175 aa7.71□□□□□ -1.18
TRAPPC4-211ENST00000533012 LINC00614P0C842 121 aa7.71□□□□□ -1.18
TRAPPC4-211ENST00000533012 CKS2P33552 79 aa7.71□□□□□ -1.18
TRAPPC4-211ENST00000533012 PMCHL1Q16048 86 aa7.71□□□□□ -1.18
TRAPPC4-211ENST00000533012 TMEM97Q5BJF2 176 aa7.71□□□□□ -1.18
TRAPPC4-211ENST00000533012 RPL39LQ96EH5 51 aaKnown RBP7.71□□□□□ -1.18
TRAPPC4-211ENST00000533012 HSPB8Q9UJY1 196 aa7.71□□□□□ -1.18
TRAPPC4-211ENST00000533012 IGLV2-18A0A075B6J9 118 aa7.7□□□□□ -1.18
TRAPPC4-211ENST00000533012 TRBV6-5A0A0K0K1A5 114 aa7.7□□□□□ -1.18
TRAPPC4-211ENST00000533012 NIT1Q86X76 327 aa7.7□□□□□ -1.18
TRAPPC4-211ENST00000533012 PRSS3P2Q8NHM4 247 aa7.7□□□□□ -1.18
TRAPPC4-211ENST00000533012 PRELID3AQ96N28 172 aa7.7□□□□□ -1.18
TRAPPC4-211ENST00000533012 ST20Q9HBF5 79 aa7.7□□□□□ -1.18
TRAPPC4-211ENST00000533012 AP5S1Q9NUS5 200 aa7.7□□□□□ -1.18
TRAPPC4-211ENST00000533012 TRAV9-2A0A087WT02 112 aa7.69□□□□□ -1.18
TRAPPC4-211ENST00000533012 TRBV6-8A0A0A6YYG3 113 aa7.69□□□□□ -1.18
TRAPPC4-211ENST00000533012 SDHAF1A6NFY7 115 aa7.69□□□□□ -1.18
TRAPPC4-211ENST00000533012 SMKR1H3BMG3 65 aa7.69□□□□□ -1.18
TRAPPC4-211ENST00000533012 GAS8-AS1O95177 125 aa7.69□□□□□ -1.18
TRAPPC4-211ENST00000533012 BTF3P20290 206 aaKnown RBP7.69□□□□□ -1.18
TRAPPC4-211ENST00000533012 LINC00310P59036 64 aa7.69□□□□□ -1.18
TRAPPC4-211ENST00000533012 KRTDAPP60985 99 aa7.69□□□□□ -1.18
TRAPPC4-211ENST00000533012 VAMP8Q9BV40 100 aa7.69□□□□□ -1.18
TRAPPC4-211ENST00000533012 MAP1LC3AQ9H492 121 aa7.69□□□□□ -1.18
TRAPPC4-211ENST00000533012 HYDINQ4G0P3 5121 aa7.69□□□□□ -1.18
TRAPPC4-211ENST00000533012 D6R8Y8 96 aa7.68□□□□□ -1.18
TRAPPC4-211ENST00000533012 I3L3M4 83 aa7.68□□□□□ -1.18
TRAPPC4-211ENST00000533012 M0R2N4 97 aa7.68□□□□□ -1.18
TRAPPC4-211ENST00000533012 NUPR1O60356 82 aa7.68□□□□□ -1.18
TRAPPC4-211ENST00000533012 LEPROTL1O95214 131 aa7.68□□□□□ -1.18
TRAPPC4-211ENST00000533012 NCR2O95944 276 aa7.68□□□□□ -1.18
TRAPPC4-211ENST00000533012 COTL1Q14019 142 aa7.68□□□□□ -1.18
TRAPPC4-211ENST00000533012 WFDC10BQ8IUB3 73 aa7.68□□□□□ -1.18
TRAPPC4-211ENST00000533012 NRACQ8N912 160 aa7.68□□□□□ -1.18
TRAPPC4-211ENST00000533012 NXT2Q9NPJ8 142 aaKnown RBP7.68□□□□□ -1.18
TRAPPC4-211ENST00000533012 RYR2Q92736 4967 aa7.68□□□□□ -1.18
TRAPPC4-211ENST00000533012 TRBV25-1A0A075B6N4 114 aa7.67□□□□□ -1.18
TRAPPC4-211ENST00000533012 IGHV1-24A0A0C4DH33 117 aa7.67□□□□□ -1.18
TRAPPC4-211ENST00000533012 NBDYA0A0U1RRE5 68 aa7.67□□□□□ -1.18
TRAPPC4-211ENST00000533012 K7EP13 123 aa7.67□□□□□ -1.18
TRAPPC4-211ENST00000533012 VCYO14598 125 aa7.67□□□□□ -1.18
TRAPPC4-211ENST00000533012 TNFRSF6BO95407 300 aa7.67□□□□□ -1.18
TRAPPC4-211ENST00000533012 DNAH10OSP0CZ25 163 aa7.67□□□□□ -1.18
TRAPPC4-211ENST00000533012 SUMO2P61956 95 aaKnown RBP7.67□□□□□ -1.18
TRAPPC4-211ENST00000533012 TTC32Q5I0X7 151 aa7.67□□□□□ -1.18
TRAPPC4-211ENST00000533012 TEX43Q6ZNM6 134 aa7.67□□□□□ -1.18
TRAPPC4-211ENST00000533012 NTM-AS1Q6ZSK4 140 aa7.67□□□□□ -1.18
TRAPPC4-211ENST00000533012 C20orf78Q9BR46 151 aa7.67□□□□□ -1.18
TRAPPC4-211ENST00000533012 TMEM70Q9BUB7 260 aa7.67□□□□□ -1.18
TRAPPC4-211ENST00000533012 MAP1LC3CQ9BXW4 147 aa7.67□□□□□ -1.18
TRAPPC4-211ENST00000533012 TMEM262E9PQX1 116 aa7.66□□□□□ -1.18
TRAPPC4-211ENST00000533012 POLR2KP53803 58 aaKnown RBP7.66□□□□□ -1.18
TRAPPC4-211ENST00000533012 DEFB104AQ8WTQ1 72 aa7.66□□□□□ -1.18
TRAPPC4-211ENST00000533012 CHCHD5Q9BSY4 110 aa7.66□□□□□ -1.18
TRAPPC4-211ENST00000533012 RYR3Q15413 4870 aa7.65□□□□□ -1.18
TRAPPC4-211ENST00000533012 A0A087WX48 190 aa7.65□□□□□ -1.18
TRAPPC4-211ENST00000533012 TRBV27A0A0K0K1C4 114 aa7.65□□□□□ -1.18
TRAPPC4-211ENST00000533012 C3orf79P0CE67 100 aa7.65□□□□□ -1.18
TRAPPC4-211ENST00000533012 DDTP30046 118 aa7.65□□□□□ -1.18
TRAPPC4-211ENST00000533012 LINC01556Q5JQF7 62 aa7.65□□□□□ -1.18
TRAPPC4-211ENST00000533012 PET117Q6UWS5 81 aa7.65□□□□□ -1.18
TRAPPC4-211ENST00000533012 Q6ZR54 194 aa7.65□□□□□ -1.18
TRAPPC4-211ENST00000533012 LINC01549A6NIU2 74 aa7.64□□□□□ -1.19
TRAPPC4-211ENST00000533012 HSBP1L1C9JCN9 74 aa7.64□□□□□ -1.19
TRAPPC4-211ENST00000533012 K7EMI3 77 aa7.64□□□□□ -1.19
TRAPPC4-211ENST00000533012 NPYP01303 97 aa7.64□□□□□ -1.19
TRAPPC4-211ENST00000533012 IGHV3-30P01768 117 aa7.64□□□□□ -1.19
TRAPPC4-211ENST00000533012 IGHV3-33P01772 117 aa7.64□□□□□ -1.19
TRAPPC4-211ENST00000533012 IGHV3-30-3P0DP02 117 aa7.64□□□□□ -1.19
TRAPPC4-211ENST00000533012 IGHV3-30-5P0DP03 117 aa7.64□□□□□ -1.19
TRAPPC4-211ENST00000533012 G0S2P27469 103 aa7.64□□□□□ -1.19
TRAPPC4-211ENST00000533012 LBHQ53QV2 105 aaPredicted RBP7.64□□□□□ -1.19
TRAPPC4-211ENST00000533012 MRPL52Q86TS9 123 aaKnown RBP7.64□□□□□ -1.19
TRAPPC4-211ENST00000533012 FAM19A2Q8N3H0 131 aa7.64□□□□□ -1.19
TRAPPC4-211ENST00000533012 C10orf126Q8N4M7 172 aa7.64□□□□□ -1.19
TRAPPC4-211ENST00000533012 KIR2DL4Q99706 377 aa7.64□□□□□ -1.19
TRAPPC4-211ENST00000533012 TMEM243Q9BU79 118 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms