RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 CHCHD7Q9BUK0 85 aa10.27□□□□□ -0.77
CPSF1-210ENST00000532935 PGPEP1Q9NXJ5 209 aa10.27□□□□□ -0.77
CPSF1-210ENST00000532935 A0A087WX48 190 aa10.26□□□□□ -0.77
CPSF1-210ENST00000532935 TRAV8-3A0A0A6YYJ7 113 aa10.26□□□□□ -0.77
CPSF1-210ENST00000532935 LRCOL1A6NCL2 159 aa10.26□□□□□ -0.77
CPSF1-210ENST00000532935 PHOX2AO14813 284 aa10.26□□□□□ -0.77
CPSF1-210ENST00000532935 HLA-DQA1P01909 254 aa10.26□□□□□ -0.77
CPSF1-210ENST00000532935 TRGC2P03986 189 aa10.26□□□□□ -0.77
CPSF1-210ENST00000532935 S100A8P05109 93 aa10.26□□□□□ -0.77
CPSF1-210ENST00000532935 FUSP35637 526 aaKnown RBP eCLIP10.26□□□□□ -0.77
CPSF1-210ENST00000532935 TMEM97Q5BJF2 176 aa10.26□□□□□ -0.77
CPSF1-210ENST00000532935 TM2D2Q9BX73 214 aa10.26□□□□□ -0.77
CPSF1-210ENST00000532935 TRAPPC1Q9Y5R8 145 aa10.26□□□□□ -0.77
CPSF1-210ENST00000532935 CDPF1Q6NVV7 123 aa10.25□□□□□ -0.77
CPSF1-210ENST00000532935 NTM-AS1Q6ZSK4 140 aa10.25□□□□□ -0.77
CPSF1-210ENST00000532935 PGLYRP4Q96LB8 373 aa10.25□□□□□ -0.77
CPSF1-210ENST00000532935 KLK12Q9UKR0 248 aa10.25□□□□□ -0.77
CPSF1-210ENST00000532935 TMEM262E9PQX1 116 aa10.24□□□□□ -0.77
CPSF1-210ENST00000532935 CDK2AP2O75956 126 aa10.24□□□□□ -0.77
CPSF1-210ENST00000532935 S100A6P06703 90 aa10.24□□□□□ -0.77
CPSF1-210ENST00000532935 BORCS7Q96B45 105 aa10.24□□□□□ -0.77
CPSF1-210ENST00000532935 CHCHD5Q9BSY4 110 aa10.24□□□□□ -0.77
CPSF1-210ENST00000532935 A0A1B0GXF2 115 aa10.23□□□□□ -0.77
CPSF1-210ENST00000532935 RIGQ13278 110 aa10.23□□□□□ -0.77
CPSF1-210ENST00000532935 SMIM15Q7Z3B0 74 aa10.23□□□□□ -0.77
CPSF1-210ENST00000532935 NIT2Q9NQR4 276 aa10.23□□□□□ -0.77
CPSF1-210ENST00000532935 TRBV25-1A0A075B6N4 114 aa10.22□□□□□ -0.77
CPSF1-210ENST00000532935 A0A1B0GUT8 65 aa10.22□□□□□ -0.77
CPSF1-210ENST00000532935 PKIAP61925 76 aa10.22□□□□□ -0.77
CPSF1-210ENST00000532935 HBBP68871 147 aa10.22□□□□□ -0.77
CPSF1-210ENST00000532935 FABP9Q0Z7S8 132 aa10.22□□□□□ -0.77
CPSF1-210ENST00000532935 MPV17L2Q567V2 206 aa10.22□□□□□ -0.77
CPSF1-210ENST00000532935 TMEM136Q6ZRR5 245 aa10.22□□□□□ -0.77
CPSF1-210ENST00000532935 GATD1Q8NB37 220 aa10.22□□□□□ -0.77
CPSF1-210ENST00000532935 FRZBQ92765 325 aa10.22□□□□□ -0.77
CPSF1-210ENST00000532935 UBE2WQ96B02 151 aa10.22□□□□□ -0.77
CPSF1-210ENST00000532935 PCLOQ9Y6V0 5065 aa10.22□□□□□ -0.77
CPSF1-210ENST00000532935 TRAV26-2A0A0B4J265 109 aa10.21□□□□□ -0.77
CPSF1-210ENST00000532935 HIST1H2BKO60814 126 aa10.21□□□□□ -0.77
CPSF1-210ENST00000532935 HIST1H2BJP06899 126 aa10.21□□□□□ -0.77
CPSF1-210ENST00000532935 HIST1H2BOP23527 126 aa10.21□□□□□ -0.77
CPSF1-210ENST00000532935 HIST1H2BBP33778 126 aa10.21□□□□□ -0.77
CPSF1-210ENST00000532935 HIST1H2BDP58876 126 aa10.21□□□□□ -0.77
CPSF1-210ENST00000532935 HIST1H2BCP62807 126 aa10.21□□□□□ -0.77
CPSF1-210ENST00000532935 HIST2H2BEQ16778 126 aa10.21□□□□□ -0.77
CPSF1-210ENST00000532935 IQCJQ1A5X6 159 aa10.21□□□□□ -0.77
CPSF1-210ENST00000532935 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.21□□□□□ -0.77
CPSF1-210ENST00000532935 HIST1H2BHQ93079 126 aa10.21□□□□□ -0.77
CPSF1-210ENST00000532935 RMI2Q96E14 147 aa10.21□□□□□ -0.77
CPSF1-210ENST00000532935 HIST1H2BNQ99877 126 aa10.21□□□□□ -0.77
CPSF1-210ENST00000532935 HIST1H2BMQ99879 126 aa10.21□□□□□ -0.77
CPSF1-210ENST00000532935 COX11Q9Y6N1 276 aa10.21□□□□□ -0.77
CPSF1-210ENST00000532935 IGKV2D-24A0A075B6R9 120 aa10.2□□□□□ -0.78
CPSF1-210ENST00000532935 IGHV1-24A0A0C4DH33 117 aa10.2□□□□□ -0.78
CPSF1-210ENST00000532935 LOC105371267A0A1B0GV96 52 aa10.2□□□□□ -0.78
CPSF1-210ENST00000532935 C5orf52A6NGY3 159 aa10.2□□□□□ -0.78
CPSF1-210ENST00000532935 GAGE6Q13070 117 aa10.2□□□□□ -0.78
CPSF1-210ENST00000532935 MRPL54Q6P161 138 aaKnown RBP10.2□□□□□ -0.78
CPSF1-210ENST00000532935 Q8N814 137 aa10.2□□□□□ -0.78
CPSF1-210ENST00000532935 MRPL18Q9H0U6 180 aaKnown RBP10.2□□□□□ -0.78
CPSF1-210ENST00000532935 DNAH8Q96JB1 4490 aa10.19□□□□□ -0.78
CPSF1-210ENST00000532935 ANGP03950 147 aaKnown RBP10.19□□□□□ -0.78
CPSF1-210ENST00000532935 Q0VG73 95 aa10.19□□□□□ -0.78
CPSF1-210ENST00000532935 WFDC2Q14508 124 aa10.19□□□□□ -0.78
CPSF1-210ENST00000532935 COA6Q5JTJ3 125 aaKnown RBP10.19□□□□□ -0.78
CPSF1-210ENST00000532935 MAPKAPK5-AS1Q8N8E1 139 aa10.19□□□□□ -0.78
CPSF1-210ENST00000532935 Q8N976 141 aa10.19□□□□□ -0.78
CPSF1-210ENST00000532935 APCSP02743 223 aa10.18□□□□□ -0.78
CPSF1-210ENST00000532935 RBX1P62877 108 aa10.18□□□□□ -0.78
CPSF1-210ENST00000532935 ENHOQ6UWT2 76 aa10.18□□□□□ -0.78
CPSF1-210ENST00000532935 NTN5Q8WTR8 489 aaPredicted RBP10.18□□□□□ -0.78
CPSF1-210ENST00000532935 ABCA13Q86UQ4 5058 aa10.18□□□□□ -0.78
CPSF1-210ENST00000532935 IGLV5-52A0A0A0MRZ9 124 aa10.17□□□□□ -0.78
CPSF1-210ENST00000532935 LECT2O14960 151 aa10.17□□□□□ -0.78
CPSF1-210ENST00000532935 CRPP02741 224 aa10.17□□□□□ -0.78
CPSF1-210ENST00000532935 DEFB104AQ8WTQ1 72 aa10.17□□□□□ -0.78
CPSF1-210ENST00000532935 BAALCQ8WXS3 180 aa10.17□□□□□ -0.78
CPSF1-210ENST00000532935 RPL39LQ96EH5 51 aaKnown RBP10.17□□□□□ -0.78
CPSF1-210ENST00000532935 TMEM243Q9BU79 118 aa10.17□□□□□ -0.78
CPSF1-210ENST00000532935 GCSHP23434 173 aa10.16□□□□□ -0.78
CPSF1-210ENST00000532935 KRTAP10-1P60331 282 aa10.16□□□□□ -0.78
CPSF1-210ENST00000532935 COTL1Q14019 142 aa10.16□□□□□ -0.78
CPSF1-210ENST00000532935 TMEM191AQ9H0A3 160 aa10.16□□□□□ -0.78
CPSF1-210ENST00000532935 CAMPP49913 170 aa10.15□□□□□ -0.78
CPSF1-210ENST00000532935 NDUFA6P56556 154 aa10.15□□□□□ -0.78
CPSF1-210ENST00000532935 SNRPEP62304 92 aaKnown RBP10.15□□□□□ -0.78
CPSF1-210ENST00000532935 C1orf43Q9BWL3 253 aa10.15□□□□□ -0.78
CPSF1-210ENST00000532935 AMTP48728 403 aa10.14□□□□□ -0.79
CPSF1-210ENST00000532935 MIAQ16674 131 aa10.14□□□□□ -0.79
CPSF1-210ENST00000532935 LINC00269Q8N2A0 174 aa10.14□□□□□ -0.79
CPSF1-210ENST00000532935 KRTAP17-1Q9BYP8 105 aa10.14□□□□□ -0.79
CPSF1-210ENST00000532935 PRR34Q9NV39 138 aa10.14□□□□□ -0.79
CPSF1-210ENST00000532935 A0A1B0GUV1 79 aa10.13□□□□□ -0.79
CPSF1-210ENST00000532935 SDHAF1A6NFY7 115 aa10.13□□□□□ -0.79
CPSF1-210ENST00000532935 UBE2L6O14933 153 aa10.13□□□□□ -0.79
CPSF1-210ENST00000532935 CLPSL2Q6UWE3 100 aa10.13□□□□□ -0.79
CPSF1-210ENST00000532935 RNF185Q96GF1 192 aa10.13□□□□□ -0.79
CPSF1-210ENST00000532935 TRBV6-5A0A0K0K1A5 114 aa10.12□□□□□ -0.79
CPSF1-210ENST00000532935 GAS8-AS1O95177 125 aa10.12□□□□□ -0.79
CPSF1-210ENST00000532935 NCR2O95944 276 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 263.3 ms