RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 BPY2O14599 106 aa6.65□□□□□ -1.34
CTNND1-232ENST00000532649 IGKV1D-37A0A075B6S9 117 aa6.65□□□□□ -1.34
CTNND1-232ENST00000532649 IGLL1P15814 213 aa6.65□□□□□ -1.34
CTNND1-232ENST00000532649 C10orf91Q5T1B1 145 aa6.65□□□□□ -1.35
CTNND1-232ENST00000532649 NFE4Q86UQ8 179 aa6.65□□□□□ -1.35
CTNND1-232ENST00000532649 PRO0255Q9UI72 69 aa6.65□□□□□ -1.35
CTNND1-232ENST00000532649 Q8N1Y9 231 aa6.64□□□□□ -1.35
CTNND1-232ENST00000532649 CCDC140Q96MF4 163 aa6.64□□□□□ -1.35
CTNND1-232ENST00000532649 CDSNQ15517 529 aa6.64□□□□□ -1.35
CTNND1-232ENST00000532649 PIEZO2Q9H5I5 2752 aa6.64□□□□□ -1.35
CTNND1-232ENST00000532649 SONP18583 2426 aaKnown RBP6.64□□□□□ -1.35
CTNND1-232ENST00000532649 GATA1P15976 413 aaPredicted RBP6.64□□□□□ -1.35
CTNND1-232ENST00000532649 Q6ZPA2 131 aa6.64□□□□□ -1.35
CTNND1-232ENST00000532649 TEX49A0A1B0GTD5 131 aa6.64□□□□□ -1.35
CTNND1-232ENST00000532649 LY6G6DO95868 133 aa6.64□□□□□ -1.35
CTNND1-232ENST00000532649 CRYGBP07316 175 aa6.64□□□□□ -1.35
CTNND1-232ENST00000532649 CRIP3Q6Q6R5 217 aa6.64□□□□□ -1.35
CTNND1-232ENST00000532649 TMEM263Q8WUH6 116 aaKnown RBP6.64□□□□□ -1.35
CTNND1-232ENST00000532649 UBE2D2P62837 147 aa6.63□□□□□ -1.35
CTNND1-232ENST00000532649 UFSP1Q6NVU6 142 aa6.63□□□□□ -1.35
CTNND1-232ENST00000532649 DAND5Q8N907 189 aa6.63□□□□□ -1.35
CTNND1-232ENST00000532649 ODF1Q14990 250 aa6.63□□□□□ -1.35
CTNND1-232ENST00000532649 C1orf229Q6ZS94 237 aaPredicted RBP6.63□□□□□ -1.35
CTNND1-232ENST00000532649 DEFB131BA0A096LNP1 70 aa6.63□□□□□ -1.35
CTNND1-232ENST00000532649 NDUFC2-KCTD14E9PQ53 114 aa6.63□□□□□ -1.35
CTNND1-232ENST00000532649 LGALS9O00182 355 aa6.63□□□□□ -1.35
CTNND1-232ENST00000532649 LY6G6CO95867 125 aa6.63□□□□□ -1.35
CTNND1-232ENST00000532649 IGF1P05019 195 aa6.63□□□□□ -1.35
CTNND1-232ENST00000532649 WFDC10BQ8IUB3 73 aa6.63□□□□□ -1.35
CTNND1-232ENST00000532649 NACAE9PAV3 2078 aa6.62□□□□□ -1.35
CTNND1-232ENST00000532649 FAM19A5Q7Z5A7 132 aaPredicted RBP6.62□□□□□ -1.35
CTNND1-232ENST00000532649 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.62□□□□□ -1.35
CTNND1-232ENST00000532649 MLST8Q9BVC4 326 aa6.62□□□□□ -1.35
CTNND1-232ENST00000532649 MSRB1Q9NZV6 116 aa6.62□□□□□ -1.35
CTNND1-232ENST00000532649 A0A0J9YXV3 536 aa6.62□□□□□ -1.35
CTNND1-232ENST00000532649 MAP6D1Q9H9H5 199 aa6.62□□□□□ -1.35
CTNND1-232ENST00000532649 SHISA2Q6UWI4 295 aa6.62□□□□□ -1.35
CTNND1-232ENST00000532649 TRAV26-1A0A087WT03 109 aa6.62□□□□□ -1.35
CTNND1-232ENST00000532649 MED14OSP0DP75 135 aa6.62□□□□□ -1.35
CTNND1-232ENST00000532649 BRWD1-AS2P59051 145 aa6.62□□□□□ -1.35
CTNND1-232ENST00000532649 MIR7-3HGQ8N6C7 128 aa6.62□□□□□ -1.35
CTNND1-232ENST00000532649 Q6ZSV7 163 aa6.61□□□□□ -1.35
CTNND1-232ENST00000532649 SPANXB1Q9NS25 103 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-232ENST00000532649 PLA2G2EQ9NZK7 142 aa6.61□□□□□ -1.35
CTNND1-232ENST00000532649 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-232ENST00000532649 P0C879 139 aa6.61□□□□□ -1.35
CTNND1-232ENST00000532649 HIVEP3Q5T1R4 2406 aa6.61□□□□□ -1.35
CTNND1-232ENST00000532649 A0A0J9YX75 114 aa6.61□□□□□ -1.35
CTNND1-232ENST00000532649 REG3AQ06141 175 aa6.61□□□□□ -1.35
CTNND1-232ENST00000532649 FOXI1Q12951 378 aa6.61□□□□□ -1.35
CTNND1-232ENST00000532649 NAV2Q8IVL1 2488 aa6.61□□□□□ -1.35
CTNND1-232ENST00000532649 CCDC168Q8NDH2 2452 aa6.61□□□□□ -1.35
CTNND1-232ENST00000532649 A4D1N5 150 aa6.61□□□□□ -1.35
CTNND1-232ENST00000532649 HRCT1Q6UXD1 115 aa6.61□□□□□ -1.35
CTNND1-232ENST00000532649 IGKV2D-26A0A0A0MRZ7 120 aa6.6□□□□□ -1.35
CTNND1-232ENST00000532649 IGHV1-58A0A0C4DH39 117 aa6.6□□□□□ -1.35
CTNND1-232ENST00000532649 LY6LH3BQJ8 138 aa6.6□□□□□ -1.35
CTNND1-232ENST00000532649 SPINK6Q6UWN8 80 aa6.6□□□□□ -1.35
CTNND1-232ENST00000532649 TNCP24821 2201 aa6.6□□□□□ -1.35
CTNND1-232ENST00000532649 FAM236DA0A1B0GTK5 79 aa6.6□□□□□ -1.35
CTNND1-232ENST00000532649 FAM236CP0DP71 79 aa6.6□□□□□ -1.35
CTNND1-232ENST00000532649 LYRM9A8MSI8 78 aa6.6□□□□□ -1.35
CTNND1-232ENST00000532649 M0R2N4 97 aa6.59□□□□□ -1.35
CTNND1-232ENST00000532649 LINC00322Q6ZN03 302 aaPredicted RBP6.59□□□□□ -1.35
CTNND1-232ENST00000532649 LINC00269Q8N2A0 174 aa6.59□□□□□ -1.35
CTNND1-232ENST00000532649 A0A0J9YWU9 116 aa6.59□□□□□ -1.35
CTNND1-232ENST00000532649 COL5A1P20908 1838 aaPredicted RBP6.59□□□□□ -1.35
CTNND1-232ENST00000532649 TOMM6Q96B49 74 aa6.59□□□□□ -1.35
CTNND1-232ENST00000532649 EBI3Q14213 229 aa6.59□□□□□ -1.35
CTNND1-232ENST00000532649 C10orf99Q6UWK7 81 aa6.59□□□□□ -1.35
CTNND1-232ENST00000532649 CLEC2BQ92478 149 aa6.59□□□□□ -1.35
CTNND1-232ENST00000532649 HIST2H2BDQ6DRA6 164 aa6.59□□□□□ -1.36
CTNND1-232ENST00000532649 Q6ZUT4 128 aa6.59□□□□□ -1.36
CTNND1-232ENST00000532649 C9orf85Q96MD7 179 aa6.58□□□□□ -1.36
CTNND1-232ENST00000532649 TRAV10A0A0B4J240 114 aa6.58□□□□□ -1.36
CTNND1-232ENST00000532649 PRYO14603 147 aa6.58□□□□□ -1.36
CTNND1-232ENST00000532649 ZNF747Q9BV97 191 aa6.58□□□□□ -1.36
CTNND1-232ENST00000532649 C11orf1Q9H5F2 150 aa6.58□□□□□ -1.36
CTNND1-232ENST00000532649 MDFICQ9P1T7 246 aa6.58□□□□□ -1.36
CTNND1-232ENST00000532649 SMIM9A6NGZ8 99 aa6.58□□□□□ -1.36
CTNND1-232ENST00000532649 C11orf86A6NJI1 115 aa6.58□□□□□ -1.36
CTNND1-232ENST00000532649 WNK1Q9H4A3 2382 aa6.58□□□□□ -1.36
CTNND1-232ENST00000532649 TRBV6-1A0A0K0K1D8 114 aa6.58□□□□□ -1.36
CTNND1-232ENST00000532649 EIF4EBP1Q13541 118 aaPredicted RBP6.57□□□□□ -1.36
CTNND1-232ENST00000532649 RPL39P62891 51 aaKnown RBP6.57□□□□□ -1.36
CTNND1-232ENST00000532649 DEFB114Q30KQ6 69 aa6.57□□□□□ -1.36
CTNND1-232ENST00000532649 FSHBP01225 129 aa6.57□□□□□ -1.36
CTNND1-232ENST00000532649 Q6ZVQ6 151 aa6.57□□□□□ -1.36
CTNND1-232ENST00000532649 SPATA12Q7Z6I5 190 aa6.57□□□□□ -1.36
CTNND1-232ENST00000532649 TEN1Q86WV5 123 aa6.57□□□□□ -1.36
CTNND1-232ENST00000532649 ZFAND2AQ8N6M9 145 aa6.57□□□□□ -1.36
CTNND1-232ENST00000532649 IGLV2-18A0A075B6J9 118 aa6.57□□□□□ -1.36
CTNND1-232ENST00000532649 CHCHD10Q8WYQ3 142 aaPredicted RBP6.57□□□□□ -1.36
CTNND1-232ENST00000532649 TRAV23DV6A0A075B6W5 121 aa6.56□□□□□ -1.36
CTNND1-232ENST00000532649 G3V4G9 280 aa6.56□□□□□ -1.36
CTNND1-232ENST00000532649 C1orf195Q5TG92 126 aa6.56□□□□□ -1.36
CTNND1-232ENST00000532649 WDR87Q6ZQQ6 2873 aa6.56□□□□□ -1.36
CTNND1-232ENST00000532649 NUPR2A6NF83 97 aa6.56□□□□□ -1.36
CTNND1-232ENST00000532649 KRTAP10-9P60411 292 aa6.56□□□□□ -1.36
CTNND1-232ENST00000532649 KIAA1549Q9HCM3 1950 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms