RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 WFDC2Q14508 124 aa11.45□□□□□ -0.58
PCDHA3-202ENST00000532566 TRAV4A0A0B4J268 109 aa11.45□□□□□ -0.58
PCDHA3-202ENST00000532566 Q6ZSV7 163 aa11.45□□□□□ -0.58
PCDHA3-202ENST00000532566 ZNF843Q8N446 348 aa11.45□□□□□ -0.58
PCDHA3-202ENST00000532566 RAI1Q7Z5J4 1906 aaPredicted RBP11.45□□□□□ -0.58
PCDHA3-202ENST00000532566 PSMG3-AS1Q96PY0 264 aa11.45□□□□□ -0.58
PCDHA3-202ENST00000532566 CNFNQ9BYD5 112 aa11.44□□□□□ -0.58
PCDHA3-202ENST00000532566 RNASE3P12724 160 aaKnown RBP11.44□□□□□ -0.58
PCDHA3-202ENST00000532566 Q6ZUT4 128 aa11.44□□□□□ -0.58
PCDHA3-202ENST00000532566 ANKRD29Q8N6D5 301 aa11.44□□□□□ -0.58
PCDHA3-202ENST00000532566 DAND5Q8N907 189 aa11.44□□□□□ -0.58
PCDHA3-202ENST00000532566 SND1-IT1Q9HBX3 110 aa11.44□□□□□ -0.58
PCDHA3-202ENST00000532566 Q6ZTI0 123 aa11.43□□□□□ -0.58
PCDHA3-202ENST00000532566 NRACQ8N912 160 aa11.43□□□□□ -0.58
PCDHA3-202ENST00000532566 COX7B2Q8TF08 81 aa11.43□□□□□ -0.58
PCDHA3-202ENST00000532566 IGKV2D-26A0A0A0MRZ7 120 aa11.43□□□□□ -0.58
PCDHA3-202ENST00000532566 ZNF702PQ9H963 129 aa11.43□□□□□ -0.58
PCDHA3-202ENST00000532566 KLLNB2CW77 178 aa11.43□□□□□ -0.58
PCDHA3-202ENST00000532566 M0QY20 66 aa11.43□□□□□ -0.58
PCDHA3-202ENST00000532566 ICOSQ9Y6W8 199 aa11.43□□□□□ -0.58
PCDHA3-202ENST00000532566 INSL3P51460 131 aa11.43□□□□□ -0.58
PCDHA3-202ENST00000532566 DEFB135Q30KP9 77 aa11.43□□□□□ -0.58
PCDHA3-202ENST00000532566 F8W735 103 aaPredicted RBP11.42□□□□□ -0.58
PCDHA3-202ENST00000532566 AVPP01185 164 aa11.42□□□□□ -0.58
PCDHA3-202ENST00000532566 ESM1Q9NQ30 184 aa11.42□□□□□ -0.58
PCDHA3-202ENST00000532566 IGLV10-54A0A075B6I4 117 aa11.42□□□□□ -0.58
PCDHA3-202ENST00000532566 TET2Q6N021 2002 aaPredicted RBP11.42□□□□□ -0.58
PCDHA3-202ENST00000532566 IGHV4-4A0A075B6R2 117 aa11.42□□□□□ -0.58
PCDHA3-202ENST00000532566 LINC01620Q4KN68 170 aa11.42□□□□□ -0.58
PCDHA3-202ENST00000532566 TEN1Q86WV5 123 aa11.42□□□□□ -0.58
PCDHA3-202ENST00000532566 NKAPP1Q8N9T2 125 aa11.42□□□□□ -0.58
PCDHA3-202ENST00000532566 COX7A2LO14548 114 aa11.41□□□□□ -0.58
PCDHA3-202ENST00000532566 FN1P02751 2386 aaKnown RBP11.41□□□□□ -0.58
PCDHA3-202ENST00000532566 TRBV27A0A0K0K1C4 114 aa11.4□□□□□ -0.58
PCDHA3-202ENST00000532566 TM2D2Q9BX73 214 aa11.4□□□□□ -0.58
PCDHA3-202ENST00000532566 BAALC-AS2P0C853 105 aa11.4□□□□□ -0.58
PCDHA3-202ENST00000532566 DCANP1Q8TF63 244 aa11.4□□□□□ -0.58
PCDHA3-202ENST00000532566 TRBV6-5A0A0K0K1A5 114 aa11.4□□□□□ -0.58
PCDHA3-202ENST00000532566 PRO0255Q9UI72 69 aa11.4□□□□□ -0.58
PCDHA3-202ENST00000532566 GAS8-AS1O95177 125 aa11.4□□□□□ -0.59
PCDHA3-202ENST00000532566 MRGPRG-AS1Q2M3A8 158 aa11.39□□□□□ -0.59
PCDHA3-202ENST00000532566 HIST2H2BCQ6DN03 193 aa11.39□□□□□ -0.59
PCDHA3-202ENST00000532566 NDUFA11Q86Y39 141 aa11.39□□□□□ -0.59
PCDHA3-202ENST00000532566 URB1-AS1Q96HZ7 61 aa11.39□□□□□ -0.59
PCDHA3-202ENST00000532566 IGLV4-3A0A075B6K6 122 aa11.39□□□□□ -0.59
PCDHA3-202ENST00000532566 TINCRA0A1B0GVN0 87 aa11.39□□□□□ -0.59
PCDHA3-202ENST00000532566 CRIP2P52943 208 aaPredicted RBP11.39□□□□□ -0.59
PCDHA3-202ENST00000532566 EDA2RQ9HAV5 297 aa11.38□□□□□ -0.59
PCDHA3-202ENST00000532566 C5orf42Q9H799 3197 aa11.38□□□□□ -0.59
PCDHA3-202ENST00000532566 F8WEM9 126 aa11.38□□□□□ -0.59
PCDHA3-202ENST00000532566 RPL32P62910 135 aaKnown RBP11.38□□□□□ -0.59
PCDHA3-202ENST00000532566 CRYBA4P53673 196 aa11.38□□□□□ -0.59
PCDHA3-202ENST00000532566 MAPKAPK5-AS1Q8N8E1 139 aa11.38□□□□□ -0.59
PCDHA3-202ENST00000532566 RMI2Q96E14 147 aa11.38□□□□□ -0.59
PCDHA3-202ENST00000532566 DEFB4AO15263 64 aa11.38□□□□□ -0.59
PCDHA3-202ENST00000532566 ZNF22P17026 224 aaPredicted RBP11.38□□□□□ -0.59
PCDHA3-202ENST00000532566 IGKV2D-24A0A075B6R9 120 aa11.37□□□□□ -0.59
PCDHA3-202ENST00000532566 H0YGX0 51 aa11.37□□□□□ -0.59
PCDHA3-202ENST00000532566 LINC00467Q9BRT7 94 aa11.37□□□□□ -0.59
PCDHA3-202ENST00000532566 C1orf43Q9BWL3 253 aa11.37□□□□□ -0.59
PCDHA3-202ENST00000532566 UBL5Q9BZL1 73 aa11.37□□□□□ -0.59
PCDHA3-202ENST00000532566 A0A0J9YXY3 114 aa11.37□□□□□ -0.59
PCDHA3-202ENST00000532566 C15orf53Q8NAA6 179 aa11.37□□□□□ -0.59
PCDHA3-202ENST00000532566 CFAP126Q5VTH2 177 aa11.36□□□□□ -0.59
PCDHA3-202ENST00000532566 Q8N976 141 aa11.36□□□□□ -0.59
PCDHA3-202ENST00000532566 POLQO75417 2590 aa11.36□□□□□ -0.59
PCDHA3-202ENST00000532566 COX8CQ7Z4L0 72 aa11.36□□□□□ -0.59
PCDHA3-202ENST00000532566 POLR2KP53803 58 aaKnown RBP11.35□□□□□ -0.59
PCDHA3-202ENST00000532566 CDKN2A-AS1Q9UH64 79 aa11.35□□□□□ -0.59
PCDHA3-202ENST00000532566 C2orf91Q6ZV80 131 aa11.35□□□□□ -0.59
PCDHA3-202ENST00000532566 MIAQ16674 131 aa11.35□□□□□ -0.59
PCDHA3-202ENST00000532566 MIR7-3HGQ8N6C7 128 aa11.35□□□□□ -0.59
PCDHA3-202ENST00000532566 C9orf85Q96MD7 179 aa11.35□□□□□ -0.59
PCDHA3-202ENST00000532566 EPG5Q9HCE0 2579 aa11.34□□□□□ -0.59
PCDHA3-202ENST00000532566 NFE4Q86UQ8 179 aa11.34□□□□□ -0.59
PCDHA3-202ENST00000532566 ORMDL1Q9P0S3 153 aa11.34□□□□□ -0.59
PCDHA3-202ENST00000532566 FLNBO75369 2602 aaKnown RBP11.34□□□□□ -0.59
PCDHA3-202ENST00000532566 PROK1P58294 105 aa11.34□□□□□ -0.59
PCDHA3-202ENST00000532566 CHD9Q3L8U1 2897 aa11.34□□□□□ -0.59
PCDHA3-202ENST00000532566 MTORP42345 2549 aa11.34□□□□□ -0.59
PCDHA3-202ENST00000532566 CRYGDP07320 174 aa11.33□□□□□ -0.6
PCDHA3-202ENST00000532566 FOXI1Q12951 378 aa11.33□□□□□ -0.6
PCDHA3-202ENST00000532566 TMEM223A0PJW6 202 aa11.33□□□□□ -0.6
PCDHA3-202ENST00000532566 IGHV3-30P01768 117 aa11.33□□□□□ -0.6
PCDHA3-202ENST00000532566 IGHV3-33P01772 117 aa11.33□□□□□ -0.6
PCDHA3-202ENST00000532566 IGHV3-30-5P0DP03 117 aa11.33□□□□□ -0.6
PCDHA3-202ENST00000532566 C18orf65Q6ZTR6 163 aa11.33□□□□□ -0.6
PCDHA3-202ENST00000532566 Q9HAA7 133 aa11.33□□□□□ -0.6
PCDHA3-202ENST00000532566 CAMK2N2Q96S95 79 aa11.33□□□□□ -0.6
PCDHA3-202ENST00000532566 ZMAT4Q9H898 229 aa11.32□□□□□ -0.6
PCDHA3-202ENST00000532566 PYGO1Q9Y3Y4 419 aa11.32□□□□□ -0.6
PCDHA3-202ENST00000532566 A0A0B4J2C4 111 aa11.32□□□□□ -0.6
PCDHA3-202ENST00000532566 TRBV10-2A0A0K0K1G8 114 aa11.32□□□□□ -0.6
PCDHA3-202ENST00000532566 H3BT86 120 aa11.32□□□□□ -0.6
PCDHA3-202ENST00000532566 CXCL5P42830 114 aa11.32□□□□□ -0.6
PCDHA3-202ENST00000532566 DSCR8Q96T75 97 aa11.32□□□□□ -0.6
PCDHA3-202ENST00000532566 BRI3O95415 125 aa11.31□□□□□ -0.6
PCDHA3-202ENST00000532566 LINC01006Q8NI28 216 aa11.31□□□□□ -0.6
PCDHA3-202ENST00000532566 SPANXDQ9BXN6 97 aa11.31□□□□□ -0.6
PCDHA3-202ENST00000532566 RS1O15537 224 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms