RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 PRR34Q9NV39 138 aa11.3□□□□□ -0.6
PHRF1-204ENST00000532550 HLA-DQA1P01909 254 aa11.29□□□□□ -0.6
PHRF1-204ENST00000532550 INAFM2P0DMQ5 153 aa11.29□□□□□ -0.6
PHRF1-204ENST00000532550 LINC01551Q86U37 167 aa11.29□□□□□ -0.6
PHRF1-204ENST00000532550 DNAH8Q96JB1 4490 aa11.29□□□□□ -0.6
PHRF1-204ENST00000532550 A0A1B0GUV1 79 aa11.28□□□□□ -0.6
PHRF1-204ENST00000532550 AMTP48728 403 aa11.28□□□□□ -0.6
PHRF1-204ENST00000532550 REG3AQ06141 175 aa11.28□□□□□ -0.6
PHRF1-204ENST00000532550 LINC01620Q4KN68 170 aa11.28□□□□□ -0.6
PHRF1-204ENST00000532550 OSTCQ9NRP0 149 aa11.28□□□□□ -0.6
PHRF1-204ENST00000532550 TSKUQ8WUA8 353 aa11.27□□□□□ -0.61
PHRF1-204ENST00000532550 USP17L23D6RBM5 183 aa11.26□□□□□ -0.61
PHRF1-204ENST00000532550 TMEM241Q24JQ0 296 aa11.26□□□□□ -0.61
PHRF1-204ENST00000532550 Q6ZSA8 131 aa11.26□□□□□ -0.61
PHRF1-204ENST00000532550 C20orf203Q8NBC4 194 aa11.26□□□□□ -0.61
PHRF1-204ENST00000532550 RPL39LQ96EH5 51 aaKnown RBP11.26□□□□□ -0.61
PHRF1-204ENST00000532550 GFRA4Q9GZZ7 299 aa11.26□□□□□ -0.61
PHRF1-204ENST00000532550 IGLV4-60A0A075B6I1 120 aa11.25□□□□□ -0.61
PHRF1-204ENST00000532550 TRAV8-4A0A0B4J246 113 aa11.25□□□□□ -0.61
PHRF1-204ENST00000532550 A0A1B0GUT8 65 aa11.25□□□□□ -0.61
PHRF1-204ENST00000532550 FAM231BA6NCW3 169 aa11.25□□□□□ -0.61
PHRF1-204ENST00000532550 HIGD1CA8MV81 97 aa11.25□□□□□ -0.61
PHRF1-204ENST00000532550 FAM74A3Q4VXF1 159 aa11.25□□□□□ -0.61
PHRF1-204ENST00000532550 IGLV10-54A0A075B6I4 117 aa11.24□□□□□ -0.61
PHRF1-204ENST00000532550 NCR2O95944 276 aa11.24□□□□□ -0.61
PHRF1-204ENST00000532550 SDHAF1A6NFY7 115 aa11.23□□□□□ -0.61
PHRF1-204ENST00000532550 KRTAP26-1Q6PEX3 210 aa11.23□□□□□ -0.61
PHRF1-204ENST00000532550 TMEM191AQ9H0A3 160 aa11.23□□□□□ -0.61
PHRF1-204ENST00000532550 PRSS1P07477 247 aa11.22□□□□□ -0.61
PHRF1-204ENST00000532550 PMCHP20382 165 aa11.22□□□□□ -0.61
PHRF1-204ENST00000532550 PEA15Q15121 130 aa11.22□□□□□ -0.61
PHRF1-204ENST00000532550 AMMECR1LQ6DCA0 310 aa11.22□□□□□ -0.61
PHRF1-204ENST00000532550 DGAT2L7PQ6IED9 249 aa11.22□□□□□ -0.61
PHRF1-204ENST00000532550 I3L3M4 83 aa11.21□□□□□ -0.61
PHRF1-204ENST00000532550 APCSP02743 223 aa11.21□□□□□ -0.61
PHRF1-204ENST00000532550 RPL23P62829 140 aaKnown RBP11.21□□□□□ -0.61
PHRF1-204ENST00000532550 CLRN3Q8NCR9 226 aa11.21□□□□□ -0.61
PHRF1-204ENST00000532550 ISOC2Q96AB3 205 aa11.21□□□□□ -0.61
PHRF1-204ENST00000532550 V9GYV3 84 aa11.21□□□□□ -0.61
PHRF1-204ENST00000532550 TRBV6-5A0A0K0K1A5 114 aa11.2□□□□□ -0.62
PHRF1-204ENST00000532550 H7C423 109 aa11.2□□□□□ -0.62
PHRF1-204ENST00000532550 RIGQ13278 110 aa11.2□□□□□ -0.62
PHRF1-204ENST00000532550 ADIRFQ15847 76 aa11.2□□□□□ -0.62
PHRF1-204ENST00000532550 CHAC1Q9BUX1 264 aa11.2□□□□□ -0.62
PHRF1-204ENST00000532550 SMDT1Q9H4I9 107 aa11.2□□□□□ -0.62
PHRF1-204ENST00000532550 ST20Q9HBF5 79 aa11.2□□□□□ -0.62
PHRF1-204ENST00000532550 NAT8Q9UHE5 227 aa11.2□□□□□ -0.62
PHRF1-204ENST00000532550 SRRM2Q9UQ35 2752 aaKnown RBP11.2□□□□□ -0.62
PHRF1-204ENST00000532550 C9JQL5 133 aa11.19□□□□□ -0.62
PHRF1-204ENST00000532550 PLA2G1BP04054 148 aaKnown RBP11.19□□□□□ -0.62
PHRF1-204ENST00000532550 RAB4AP20338 218 aa11.19□□□□□ -0.62
PHRF1-204ENST00000532550 RNASEKQ6P5S7 137 aaKnown RBP11.19□□□□□ -0.62
PHRF1-204ENST00000532550 SCXQ7RTU7 201 aa11.19□□□□□ -0.62
PHRF1-204ENST00000532550 NUP35Q8NFH5 326 aa11.19□□□□□ -0.62
PHRF1-204ENST00000532550 NAT8BQ9UHF3 227 aa11.19□□□□□ -0.62
PHRF1-204ENST00000532550 VPS13BQ7Z7G8 4022 aa11.19□□□□□ -0.62
PHRF1-204ENST00000532550 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.18□□□□□ -0.62
PHRF1-204ENST00000532550 IGKV3OR2-268A0A0C4DH90 116 aa11.18□□□□□ -0.62
PHRF1-204ENST00000532550 IGKV2-29A2NJV5 120 aaPredicted RBP11.18□□□□□ -0.62
PHRF1-204ENST00000532550 SRSF3P84103 164 aaKnown RBP11.18□□□□□ -0.62
PHRF1-204ENST00000532550 LINC00528Q8N1L1 170 aa11.18□□□□□ -0.62
PHRF1-204ENST00000532550 MRAP2Q96G30 205 aa11.18□□□□□ -0.62
PHRF1-204ENST00000532550 RNF185Q96GF1 192 aa11.18□□□□□ -0.62
PHRF1-204ENST00000532550 GAS8-AS1O95177 125 aa11.17□□□□□ -0.62
PHRF1-204ENST00000532550 FGF6P10767 208 aa11.17□□□□□ -0.62
PHRF1-204ENST00000532550 AMN1Q8IY45 258 aa11.17□□□□□ -0.62
PHRF1-204ENST00000532550 C9orf163Q8N9P6 203 aa11.17□□□□□ -0.62
PHRF1-204ENST00000532550 FLG2Q5D862 2391 aaPredicted RBP11.16□□□□□ -0.62
PHRF1-204ENST00000532550 hDV102S1A0JD36 115 aa11.16□□□□□ -0.62
PHRF1-204ENST00000532550 CIRBP-AS1Q8TBR5 109 aa11.16□□□□□ -0.62
PHRF1-204ENST00000532550 TMEM101Q96IK0 257 aa11.16□□□□□ -0.62
PHRF1-204ENST00000532550 BTF3L4Q96K17 158 aa11.16□□□□□ -0.62
PHRF1-204ENST00000532550 POLR2KP53803 58 aaKnown RBP11.15□□□□□ -0.62
PHRF1-204ENST00000532550 AP5S1Q9NUS5 200 aa11.15□□□□□ -0.62
PHRF1-204ENST00000532550 GAGE12HA6NDE8 117 aa11.14□□□□□ -0.63
PHRF1-204ENST00000532550 PPP1R17O96001 155 aa11.14□□□□□ -0.63
PHRF1-204ENST00000532550 ZNF25P17030 456 aaPredicted RBP11.14□□□□□ -0.63
PHRF1-204ENST00000532550 RPS10P46783 165 aaKnown RBP11.14□□□□□ -0.63
PHRF1-204ENST00000532550 CFAP161Q6P656 301 aa11.14□□□□□ -0.63
PHRF1-204ENST00000532550 TMEM242Q9NWH2 141 aa11.14□□□□□ -0.63
PHRF1-204ENST00000532550 TRBV27A0A0K0K1C4 114 aa11.13□□□□□ -0.63
PHRF1-204ENST00000532550 SMIM27A0A1W2PRY6 76 aa11.13□□□□□ -0.63
PHRF1-204ENST00000532550 VCYO14598 125 aa11.13□□□□□ -0.63
PHRF1-204ENST00000532550 TSHBP01222 138 aa11.13□□□□□ -0.63
PHRF1-204ENST00000532550 ESDP10768 282 aa11.13□□□□□ -0.63
PHRF1-204ENST00000532550 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.12□□□□□ -0.63
PHRF1-204ENST00000532550 SMKR1H3BMG3 65 aa11.12□□□□□ -0.63
PHRF1-204ENST00000532550 CAMPP49913 170 aa11.12□□□□□ -0.63
PHRF1-204ENST00000532550 CNBPP62633 177 aaKnown RBP11.12□□□□□ -0.63
PHRF1-204ENST00000532550 CHCHD10Q8WYQ3 142 aaPredicted RBP11.12□□□□□ -0.63
PHRF1-204ENST00000532550 A0A1B0GW15 77 aa11.11□□□□□ -0.63
PHRF1-204ENST00000532550 FCER1GP30273 86 aa11.11□□□□□ -0.63
PHRF1-204ENST00000532550 FAM104BQ5XKR9 115 aa11.11□□□□□ -0.63
PHRF1-204ENST00000532550 OR5A1Q8NGJ0 315 aa11.11□□□□□ -0.63
PHRF1-204ENST00000532550 SDIM1Q6ZPB5 146 aa11.1□□□□□ -0.63
PHRF1-204ENST00000532550 DMBT1Q9UGM3 2413 aaPredicted RBP11.1□□□□□ -0.63
PHRF1-204ENST00000532550 C7orf77A4D0Y5 90 aa11.09□□□□□ -0.63
PHRF1-204ENST00000532550 SUMO2P61956 95 aaKnown RBP11.09□□□□□ -0.63
PHRF1-204ENST00000532550 MRPL51Q4U2R6 128 aaKnown RBP11.09□□□□□ -0.63
PHRF1-204ENST00000532550 NRACQ8N912 160 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms