RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 MRAP2Q96G30 205 aa9.25□□□□□ -0.93
TSPAN4-220ENST00000532375 PRR34Q9NV39 138 aa9.25□□□□□ -0.93
TSPAN4-220ENST00000532375 URGCP-MRPS24S4R325 110 aa9.25□□□□□ -0.93
TSPAN4-220ENST00000532375 A0A1B0GW15 77 aa9.24□□□□□ -0.93
TSPAN4-220ENST00000532375 FUSP35637 526 aaKnown RBP eCLIP9.24□□□□□ -0.93
TSPAN4-220ENST00000532375 COTL1Q14019 142 aa9.24□□□□□ -0.93
TSPAN4-220ENST00000532375 ELOBQ15370 118 aa9.24□□□□□ -0.93
TSPAN4-220ENST00000532375 C10orf91Q5T1B1 145 aa9.24□□□□□ -0.93
TSPAN4-220ENST00000532375 MRPL54Q6P161 138 aaKnown RBP9.24□□□□□ -0.93
TSPAN4-220ENST00000532375 KCNIP4Q6PIL6 250 aa9.24□□□□□ -0.93
TSPAN4-220ENST00000532375 COMMD7Q86VX2 200 aa9.24□□□□□ -0.93
TSPAN4-220ENST00000532375 C20orf203Q8NBC4 194 aa9.24□□□□□ -0.93
TSPAN4-220ENST00000532375 UBE2WQ96B02 151 aa9.24□□□□□ -0.93
TSPAN4-220ENST00000532375 TMEM243Q9BU79 118 aa9.24□□□□□ -0.93
TSPAN4-220ENST00000532375 TMEM70Q9BUB7 260 aa9.24□□□□□ -0.93
TSPAN4-220ENST00000532375 HSPG2P98160 4391 aa9.24□□□□□ -0.93
TSPAN4-220ENST00000532375 DNAH8Q96JB1 4490 aa9.23□□□□□ -0.93
TSPAN4-220ENST00000532375 IGLV4-60A0A075B6I1 120 aa9.23□□□□□ -0.93
TSPAN4-220ENST00000532375 A0A1B0GUV1 79 aa9.23□□□□□ -0.93
TSPAN4-220ENST00000532375 NCR2O95944 276 aa9.23□□□□□ -0.93
TSPAN4-220ENST00000532375 MT-ND4LP03901 98 aa9.23□□□□□ -0.93
TSPAN4-220ENST00000532375 PKIAP61925 76 aa9.23□□□□□ -0.93
TSPAN4-220ENST00000532375 KRTAP26-1Q6PEX3 210 aa9.23□□□□□ -0.93
TSPAN4-220ENST00000532375 TM2D2Q9BX73 214 aa9.23□□□□□ -0.93
TSPAN4-220ENST00000532375 SEC11CQ9BY50 192 aa9.23□□□□□ -0.93
TSPAN4-220ENST00000532375 TRBV27A0A0K0K1C4 114 aa9.22□□□□□ -0.93
TSPAN4-220ENST00000532375 C16orf90A8MZG2 172 aa9.22□□□□□ -0.93
TSPAN4-220ENST00000532375 F8W036 122 aa9.22□□□□□ -0.93
TSPAN4-220ENST00000532375 TSHBP01222 138 aa9.22□□□□□ -0.93
TSPAN4-220ENST00000532375 ESDP10768 282 aa9.22□□□□□ -0.93
TSPAN4-220ENST00000532375 HBBP68871 147 aa9.22□□□□□ -0.93
TSPAN4-220ENST00000532375 ST20Q9HBF5 79 aa9.22□□□□□ -0.93
TSPAN4-220ENST00000532375 PGPEP1Q9NXJ5 209 aa9.22□□□□□ -0.93
TSPAN4-220ENST00000532375 TRBV24-1A0A075B6N3 115 aa9.21□□□□□ -0.94
TSPAN4-220ENST00000532375 I3L3M4 83 aa9.21□□□□□ -0.94
TSPAN4-220ENST00000532375 ANGP03950 147 aaKnown RBP9.21□□□□□ -0.94
TSPAN4-220ENST00000532375 AMTP48728 403 aa9.21□□□□□ -0.94
TSPAN4-220ENST00000532375 ATP5L2Q7Z4Y8 100 aa9.21□□□□□ -0.94
TSPAN4-220ENST00000532375 PSCAO43653 123 aa9.2□□□□□ -0.94
TSPAN4-220ENST00000532375 PMCHP20382 165 aa9.2□□□□□ -0.94
TSPAN4-220ENST00000532375 Q0VG73 95 aa9.2□□□□□ -0.94
TSPAN4-220ENST00000532375 LINC00269Q8N2A0 174 aa9.2□□□□□ -0.94
TSPAN4-220ENST00000532375 COX11Q9Y6N1 276 aa9.2□□□□□ -0.94
TSPAN4-220ENST00000532375 IGKV2D-24A0A075B6R9 120 aa9.19□□□□□ -0.94
TSPAN4-220ENST00000532375 S100A8P05109 93 aa9.19□□□□□ -0.94
TSPAN4-220ENST00000532375 SUMO2P61956 95 aaKnown RBP9.19□□□□□ -0.94
TSPAN4-220ENST00000532375 Q8N814 137 aa9.19□□□□□ -0.94
TSPAN4-220ENST00000532375 TMEM242Q9NWH2 141 aa9.19□□□□□ -0.94
TSPAN4-220ENST00000532375 CARHSP1Q9Y2V2 147 aaKnown RBP9.19□□□□□ -0.94
TSPAN4-220ENST00000532375 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.18□□□□□ -0.94
TSPAN4-220ENST00000532375 IGKV2-29A2NJV5 120 aaPredicted RBP9.18□□□□□ -0.94
TSPAN4-220ENST00000532375 H7C423 109 aa9.18□□□□□ -0.94
TSPAN4-220ENST00000532375 VCYO14598 125 aa9.18□□□□□ -0.94
TSPAN4-220ENST00000532375 EREGO14944 169 aa9.18□□□□□ -0.94
TSPAN4-220ENST00000532375 APCSP02743 223 aa9.18□□□□□ -0.94
TSPAN4-220ENST00000532375 MIAQ16674 131 aa9.18□□□□□ -0.94
TSPAN4-220ENST00000532375 BAALCQ8WXS3 180 aa9.18□□□□□ -0.94
TSPAN4-220ENST00000532375 RMI2Q96E14 147 aa9.18□□□□□ -0.94
TSPAN4-220ENST00000532375 IMMP2LQ96T52 175 aa9.18□□□□□ -0.94
TSPAN4-220ENST00000532375 CTDSP1Q9GZU7 261 aa9.18□□□□□ -0.94
TSPAN4-220ENST00000532375 D6R8Y8 96 aa9.17□□□□□ -0.94
TSPAN4-220ENST00000532375 TNFRSF6BO95407 300 aa9.17□□□□□ -0.94
TSPAN4-220ENST00000532375 PPP1R17O96001 155 aa9.17□□□□□ -0.94
TSPAN4-220ENST00000532375 CKS2P33552 79 aa9.17□□□□□ -0.94
TSPAN4-220ENST00000532375 RPL32P62910 135 aaKnown RBP9.17□□□□□ -0.94
TSPAN4-220ENST00000532375 REG3AQ06141 175 aa9.17□□□□□ -0.94
TSPAN4-220ENST00000532375 CDPF1Q6NVV7 123 aa9.17□□□□□ -0.94
TSPAN4-220ENST00000532375 CLPSL2Q6UWE3 100 aa9.17□□□□□ -0.94
TSPAN4-220ENST00000532375 C20orf78Q9BR46 151 aa9.17□□□□□ -0.94
TSPAN4-220ENST00000532375 LECT2O14960 151 aa9.16□□□□□ -0.94
TSPAN4-220ENST00000532375 NPYP01303 97 aa9.16□□□□□ -0.94
TSPAN4-220ENST00000532375 FGF6P10767 208 aa9.16□□□□□ -0.94
TSPAN4-220ENST00000532375 KRTAP10-1P60331 282 aa9.16□□□□□ -0.94
TSPAN4-220ENST00000532375 BTF3L4Q96K17 158 aa9.16□□□□□ -0.94
TSPAN4-220ENST00000532375 C1orf43Q9BWL3 253 aa9.16□□□□□ -0.94
TSPAN4-220ENST00000532375 C7orf77A4D0Y5 90 aa9.15□□□□□ -0.94
TSPAN4-220ENST00000532375 PHOX2AO14813 284 aa9.15□□□□□ -0.94
TSPAN4-220ENST00000532375 UBE2L6O14933 153 aa9.15□□□□□ -0.94
TSPAN4-220ENST00000532375 CRPP02741 224 aa9.15□□□□□ -0.94
TSPAN4-220ENST00000532375 PPBPP02775 128 aa9.15□□□□□ -0.94
TSPAN4-220ENST00000532375 NTN5Q8WTR8 489 aaPredicted RBP9.15□□□□□ -0.94
TSPAN4-220ENST00000532375 CDK2AP2O75956 126 aa9.14□□□□□ -0.95
TSPAN4-220ENST00000532375 TMEM136Q6ZRR5 245 aa9.14□□□□□ -0.95
TSPAN4-220ENST00000532375 MRPL52Q86TS9 123 aaKnown RBP9.14□□□□□ -0.95
TSPAN4-220ENST00000532375 TRAV8-4A0A0B4J246 113 aa9.13□□□□□ -0.95
TSPAN4-220ENST00000532375 PRSS47A8MTI9 375 aa9.13□□□□□ -0.95
TSPAN4-220ENST00000532375 ORMDL3Q8N138 153 aa9.13□□□□□ -0.95
TSPAN4-220ENST00000532375 CLRN3Q8NCR9 226 aa9.13□□□□□ -0.95
TSPAN4-220ENST00000532375 SMIM2Q9BVW6 85 aa9.13□□□□□ -0.95
TSPAN4-220ENST00000532375 IGLV10-54A0A075B6I4 117 aa9.12□□□□□ -0.95
TSPAN4-220ENST00000532375 TRAV9-1A0A075B6T8 112 aa9.12□□□□□ -0.95
TSPAN4-220ENST00000532375 ZNF25P17030 456 aaPredicted RBP9.12□□□□□ -0.95
TSPAN4-220ENST00000532375 FAM104AQ969W3 186 aa9.12□□□□□ -0.95
TSPAN4-220ENST00000532375 PRELID3AQ96N28 172 aa9.12□□□□□ -0.95
TSPAN4-220ENST00000532375 CDC42SE2Q9NRR3 84 aa9.12□□□□□ -0.95
TSPAN4-220ENST00000532375 FAT1Q14517 4588 aa9.11□□□□□ -0.95
TSPAN4-220ENST00000532375 IGLV5-52A0A0A0MRZ9 124 aa9.11□□□□□ -0.95
TSPAN4-220ENST00000532375 GCSHP23434 173 aa9.11□□□□□ -0.95
TSPAN4-220ENST00000532375 AMMECR1LQ6DCA0 310 aa9.11□□□□□ -0.95
TSPAN4-220ENST00000532375 RNASEKQ6P5S7 137 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms