RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 DNLZQ5SXM8 178 aa3.98□□□□□ -1.77
HMGB1P42-201ENST00000532126 CFAP126Q5VTH2 177 aa3.98□□□□□ -1.77
HMGB1P42-201ENST00000532126 NEGR1Q7Z3B1 354 aa3.98□□□□□ -1.77
HMGB1P42-201ENST00000532126 ZNRF2Q8NHG8 242 aa3.98□□□□□ -1.77
HMGB1P42-201ENST00000532126 MRAP2Q96G30 205 aa3.98□□□□□ -1.77
HMGB1P42-201ENST00000532126 PRAC1Q96KF2 57 aa3.98□□□□□ -1.77
HMGB1P42-201ENST00000532126 PHLDA3Q9Y5J5 127 aa3.98□□□□□ -1.77
HMGB1P42-201ENST00000532126 RBFOX3A6NFN3 312 aa3.97□□□□□ -1.77
HMGB1P42-201ENST00000532126 LINC00587B1AMM8 73 aa3.97□□□□□ -1.77
HMGB1P42-201ENST00000532126 M0R381 172 aa3.97□□□□□ -1.77
HMGB1P42-201ENST00000532126 SMIM6P0DI80 62 aa3.97□□□□□ -1.77
HMGB1P42-201ENST00000532126 RPL19P84098 196 aaKnown RBP3.97□□□□□ -1.77
HMGB1P42-201ENST00000532126 Q6ZR54 194 aa3.97□□□□□ -1.77
HMGB1P42-201ENST00000532126 SMIM15Q7Z3B0 74 aa3.97□□□□□ -1.77
HMGB1P42-201ENST00000532126 SMIM12Q96EX1 92 aa3.97□□□□□ -1.77
HMGB1P42-201ENST00000532126 PRADC1Q9BSG0 188 aa3.97□□□□□ -1.77
HMGB1P42-201ENST00000532126 UPK3BQ9BT76 320 aa3.97□□□□□ -1.77
HMGB1P42-201ENST00000532126 BIN3Q9NQY0 253 aa3.97□□□□□ -1.77
HMGB1P42-201ENST00000532126 MRPS16Q9Y3D3 137 aaKnown RBP3.97□□□□□ -1.77
HMGB1P42-201ENST00000532126 COX11Q9Y6N1 276 aa3.97□□□□□ -1.77
HMGB1P42-201ENST00000532126 TRBV20OR9-2A0A075B6H5 130 aa3.96□□□□□ -1.78
HMGB1P42-201ENST00000532126 TRAV9-2A0A087WT02 112 aa3.96□□□□□ -1.78
HMGB1P42-201ENST00000532126 KRTAP4-8A0A0G2JLE6 195 aa3.96□□□□□ -1.78
HMGB1P42-201ENST00000532126 NBDYA0A0U1RRE5 68 aa3.96□□□□□ -1.78
HMGB1P42-201ENST00000532126 TRBV6-4A0A1B0GX49 114 aa3.96□□□□□ -1.78
HMGB1P42-201ENST00000532126 TMEM238C9JI98 176 aa3.96□□□□□ -1.78
HMGB1P42-201ENST00000532126 TMEM250H0YL14 139 aa3.96□□□□□ -1.78
HMGB1P42-201ENST00000532126 TCAPO15273 167 aa3.96□□□□□ -1.78
HMGB1P42-201ENST00000532126 IGLV2-8P01709 118 aa3.96□□□□□ -1.78
HMGB1P42-201ENST00000532126 CXCL1P09341 107 aa3.96□□□□□ -1.78
HMGB1P42-201ENST00000532126 G0S2P27469 103 aa3.96□□□□□ -1.78
HMGB1P42-201ENST00000532126 RPS20P60866 119 aaKnown RBP3.96□□□□□ -1.78
HMGB1P42-201ENST00000532126 RHOHQ15669 191 aa3.96□□□□□ -1.78
HMGB1P42-201ENST00000532126 TEX261Q6UWH6 196 aa3.96□□□□□ -1.78
HMGB1P42-201ENST00000532126 LYPD5Q6UWN5 251 aa3.96□□□□□ -1.78
HMGB1P42-201ENST00000532126 ZFP2Q6ZN57 461 aa3.96□□□□□ -1.78
HMGB1P42-201ENST00000532126 SH2D6Q7Z4S9 175 aa3.96□□□□□ -1.78
HMGB1P42-201ENST00000532126 ZNF575Q86XF7 245 aa3.96□□□□□ -1.78
HMGB1P42-201ENST00000532126 SLC25A29Q8N8R3 303 aa3.96□□□□□ -1.78
HMGB1P42-201ENST00000532126 CHCHD10Q8WYQ3 142 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P42-201ENST00000532126 SAMD10Q9BYL1 202 aa3.96□□□□□ -1.78
HMGB1P42-201ENST00000532126 EIF5A2Q9GZV4 153 aaKnown RBP3.96□□□□□ -1.78
HMGB1P42-201ENST00000532126 SCRT2Q9NQ03 307 aa3.96□□□□□ -1.78
HMGB1P42-201ENST00000532126 TRAV8-4A0A0B4J246 113 aa3.95□□□□□ -1.78
HMGB1P42-201ENST00000532126 C19orf71A6NCJ1 209 aa3.95□□□□□ -1.78
HMGB1P42-201ENST00000532126 P01737 135 aa3.95□□□□□ -1.78
HMGB1P42-201ENST00000532126 S100A8P05109 93 aa3.95□□□□□ -1.78
HMGB1P42-201ENST00000532126 TTC32Q5I0X7 151 aa3.95□□□□□ -1.78
HMGB1P42-201ENST00000532126 C1orf134Q5TEV5 83 aa3.95□□□□□ -1.78
HMGB1P42-201ENST00000532126 FAM74A4Q5TZK3 123 aa3.95□□□□□ -1.78
HMGB1P42-201ENST00000532126 SPANXN1Q5VSR9 72 aa3.95□□□□□ -1.78
HMGB1P42-201ENST00000532126 Q6ZRP5 223 aa3.95□□□□□ -1.78
HMGB1P42-201ENST00000532126 OR2D3Q8NGH3 330 aa3.95□□□□□ -1.78
HMGB1P42-201ENST00000532126 OR10AG1Q8NH19 301 aa3.95□□□□□ -1.78
HMGB1P42-201ENST00000532126 SFRP2Q96HF1 295 aa3.95□□□□□ -1.78
HMGB1P42-201ENST00000532126 JPT2Q9H910 190 aa3.95□□□□□ -1.78
HMGB1P42-201ENST00000532126 KMT2AQ03164 3969 aa3.95□□□□□ -1.78
HMGB1P42-201ENST00000532126 EPPK1P58107 5090 aaKnown RBP3.94□□□□□ -1.78
HMGB1P42-201ENST00000532126 IGLV4-3A0A075B6K6 122 aa3.94□□□□□ -1.78
HMGB1P42-201ENST00000532126 MUC21A0A0G2JKD1 596 aa3.94□□□□□ -1.78
HMGB1P42-201ENST00000532126 MUC21A0A140T8X8 626 aa3.94□□□□□ -1.78
HMGB1P42-201ENST00000532126 LINC00862A6NCI5 91 aa3.94□□□□□ -1.78
HMGB1P42-201ENST00000532126 RTL8CO15255 209 aa3.94□□□□□ -1.78
HMGB1P42-201ENST00000532126 CRYGDP07320 174 aa3.94□□□□□ -1.78
HMGB1P42-201ENST00000532126 GZMBP10144 247 aa3.94□□□□□ -1.78
HMGB1P42-201ENST00000532126 FAM19A5Q7Z5A7 132 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P42-201ENST00000532126 Q8N1X5 172 aa3.94□□□□□ -1.78
HMGB1P42-201ENST00000532126 C6orf223Q8N319 242 aa3.94□□□□□ -1.78
HMGB1P42-201ENST00000532126 FER1L6-AS1Q8NA97 138 aa3.94□□□□□ -1.78
HMGB1P42-201ENST00000532126 TRAV8-6A0A0B4J262 113 aa3.93□□□□□ -1.78
HMGB1P42-201ENST00000532126 TINCRA0A1B0GVN0 87 aa3.93□□□□□ -1.78
HMGB1P42-201ENST00000532126 ZNF727A8MUV8 499 aa3.93□□□□□ -1.78
HMGB1P42-201ENST00000532126 F2Z2F3 143 aa3.93□□□□□ -1.78
HMGB1P42-201ENST00000532126 SRP19P09132 144 aaKnown RBP3.93□□□□□ -1.78
HMGB1P42-201ENST00000532126 IGLC6P0CF74 106 aa3.93□□□□□ -1.78
HMGB1P42-201ENST00000532126 SMIM17P0DL12 118 aa3.93□□□□□ -1.78
HMGB1P42-201ENST00000532126 ERVFC1-1P60608 527 aa3.93□□□□□ -1.78
HMGB1P42-201ENST00000532126 CACNG7P62955 275 aa3.93□□□□□ -1.78
HMGB1P42-201ENST00000532126 ZNF56Q15929 161 aa3.93□□□□□ -1.78
HMGB1P42-201ENST00000532126 WFDC10BQ8IUB3 73 aa3.93□□□□□ -1.78
HMGB1P42-201ENST00000532126 C14orf178Q8N769 122 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P42-201ENST00000532126 ATP6V0E2Q8NHE4 81 aa3.93□□□□□ -1.78
HMGB1P42-201ENST00000532126 AP1S3Q96PC3 154 aa3.93□□□□□ -1.78
HMGB1P42-201ENST00000532126 SMIM7Q9BQ49 75 aa3.93□□□□□ -1.78
HMGB1P42-201ENST00000532126 KRTAP1-5Q9BYS1 174 aa3.93□□□□□ -1.78
HMGB1P42-201ENST00000532126 RNASE7Q9H1E1 156 aaKnown RBP3.93□□□□□ -1.78
HMGB1P42-201ENST00000532126 RPP21Q9H633 154 aaKnown RBP3.93□□□□□ -1.78
HMGB1P42-201ENST00000532126 LY96Q9Y6Y9 160 aa3.93□□□□□ -1.78
HMGB1P42-201ENST00000532126 MUC4Q99102 2169 aa3.92□□□□□ -1.78
HMGB1P42-201ENST00000532126 TRBV10-1A0A0K0K1A3 114 aa3.92□□□□□ -1.78
HMGB1P42-201ENST00000532126 EVI2AP22794 236 aa3.92□□□□□ -1.78
HMGB1P42-201ENST00000532126 PEA15Q15121 130 aa3.92□□□□□ -1.78
HMGB1P42-201ENST00000532126 LELP1Q5T871 98 aa3.92□□□□□ -1.78
HMGB1P42-201ENST00000532126 NOTCH2NLQ7Z3S9 236 aa3.92□□□□□ -1.78
HMGB1P42-201ENST00000532126 NIT1Q86X76 327 aa3.92□□□□□ -1.78
HMGB1P42-201ENST00000532126 GTSF1LQ9H1H1 148 aa3.92□□□□□ -1.78
HMGB1P42-201ENST00000532126 MAP1LC3AQ9H492 121 aa3.92□□□□□ -1.78
HMGB1P42-201ENST00000532126 VPS13DQ5THJ4 4388 aa3.92□□□□□ -1.78
HMGB1P42-201ENST00000532126 TRBV7-3A0A075B6L6 115 aa3.91□□□□□ -1.78
HMGB1P42-201ENST00000532126 A0A087WWC5 75 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms