RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 J3QR89 54 aa12.23□□□□□ -0.45
VPS26B-206ENST00000531741 RS1O15537 224 aa12.23□□□□□ -0.45
VPS26B-206ENST00000531741 APOMO95445 188 aa12.23□□□□□ -0.45
VPS26B-206ENST00000531741 CHCHD7Q9BUK0 85 aa12.23□□□□□ -0.45
VPS26B-206ENST00000531741 LRRK2Q5S007 2527 aa12.23□□□□□ -0.45
VPS26B-206ENST00000531741 PRM2P04554 102 aa12.23□□□□□ -0.45
VPS26B-206ENST00000531741 FHL3Q13643 280 aa12.23□□□□□ -0.45
VPS26B-206ENST00000531741 Q6ZSN1 163 aa12.23□□□□□ -0.45
VPS26B-206ENST00000531741 C10orf126Q8N4M7 172 aa12.23□□□□□ -0.45
VPS26B-206ENST00000531741 NAV2Q8IVL1 2488 aa12.22□□□□□ -0.45
VPS26B-206ENST00000531741 UBE2D4Q9Y2X8 147 aa12.22□□□□□ -0.45
VPS26B-206ENST00000531741 TMEM238C9JI98 176 aa12.21□□□□□ -0.45
VPS26B-206ENST00000531741 ODF3L2Q3SX64 289 aa12.21□□□□□ -0.45
VPS26B-206ENST00000531741 ETDBQ3ZM63 59 aa12.21□□□□□ -0.45
VPS26B-206ENST00000531741 PRO1854Q9UHT4 67 aa12.21□□□□□ -0.45
VPS26B-206ENST00000531741 TRBV20-1A0A075B6N2 111 aa12.2□□□□□ -0.46
VPS26B-206ENST00000531741 TINCRA0A1B0GVN0 87 aa12.2□□□□□ -0.46
VPS26B-206ENST00000531741 TIMM21Q9BVV7 248 aa12.2□□□□□ -0.46
VPS26B-206ENST00000531741 DNAJC9-AS1A6NH13 148 aa12.2□□□□□ -0.46
VPS26B-206ENST00000531741 IGHV3-30-3P0DP02 117 aa12.2□□□□□ -0.46
VPS26B-206ENST00000531741 Q9UF83 564 aa12.2□□□□□ -0.46
VPS26B-206ENST00000531741 LOC107984156A0A0G2JMH3 177 aa12.19□□□□□ -0.46
VPS26B-206ENST00000531741 SH2D6Q7Z4S9 175 aa12.19□□□□□ -0.46
VPS26B-206ENST00000531741 ARL17AQ8IVW1 177 aa12.19□□□□□ -0.46
VPS26B-206ENST00000531741 ATP6V0E2Q8NHE4 81 aa12.19□□□□□ -0.46
VPS26B-206ENST00000531741 IL17DQ8TAD2 202 aa12.19□□□□□ -0.46
VPS26B-206ENST00000531741 A0A0B4J2C4 111 aa12.18□□□□□ -0.46
VPS26B-206ENST00000531741 IGHV1-58A0A0C4DH39 117 aa12.18□□□□□ -0.46
VPS26B-206ENST00000531741 A0A0J9YXY3 114 aa12.18□□□□□ -0.46
VPS26B-206ENST00000531741 ZFYVE26Q68DK2 2539 aa12.18□□□□□ -0.46
VPS26B-206ENST00000531741 IGHV3-64A0A075B6Q5 118 aa12.17□□□□□ -0.46
VPS26B-206ENST00000531741 A4D1N5 150 aa12.17□□□□□ -0.46
VPS26B-206ENST00000531741 CEMP1Q6PRD7 247 aaPredicted RBP12.17□□□□□ -0.46
VPS26B-206ENST00000531741 STHQ8IWL8 128 aa12.17□□□□□ -0.46
VPS26B-206ENST00000531741 TEX15Q9BXT5 2789 aa12.17□□□□□ -0.46
VPS26B-206ENST00000531741 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.17□□□□□ -0.46
VPS26B-206ENST00000531741 PSMB2P49721 201 aa12.17□□□□□ -0.46
VPS26B-206ENST00000531741 CCL24O00175 119 aa12.16□□□□□ -0.46
VPS26B-206ENST00000531741 C1orf158Q8N1D5 194 aa12.16□□□□□ -0.46
VPS26B-206ENST00000531741 TMEM263Q8WUH6 116 aaKnown RBP12.16□□□□□ -0.46
VPS26B-206ENST00000531741 XCL2Q9UBD3 114 aa12.16□□□□□ -0.46
VPS26B-206ENST00000531741 SMCPP49901 116 aaPredicted RBP12.15□□□□□ -0.46
VPS26B-206ENST00000531741 MUSTN1Q8IVN3 82 aa12.15□□□□□ -0.46
VPS26B-206ENST00000531741 MTURNQ8N3F0 131 aa12.15□□□□□ -0.46
VPS26B-206ENST00000531741 VSIG2Q96IQ7 327 aa12.15□□□□□ -0.46
VPS26B-206ENST00000531741 AZU1P20160 251 aa12.15□□□□□ -0.46
VPS26B-206ENST00000531741 WFDC11Q8NEX6 87 aa12.15□□□□□ -0.46
VPS26B-206ENST00000531741 LITAFQ99732 161 aa12.15□□□□□ -0.46
VPS26B-206ENST00000531741 C1QTNF4Q9BXJ3 329 aa12.15□□□□□ -0.46
VPS26B-206ENST00000531741 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.14□□□□□ -0.47
VPS26B-206ENST00000531741 IGKV2-29A2NJV5 120 aaPredicted RBP12.14□□□□□ -0.47
VPS26B-206ENST00000531741 EIF4EBP3O60516 100 aaPredicted RBP12.14□□□□□ -0.47
VPS26B-206ENST00000531741 TCL1BO95988 128 aa12.14□□□□□ -0.47
VPS26B-206ENST00000531741 IGHV3-33P01772 117 aa12.14□□□□□ -0.47
VPS26B-206ENST00000531741 Q6ZUT4 128 aa12.14□□□□□ -0.47
VPS26B-206ENST00000531741 SBSPONQ8IVN8 264 aa12.14□□□□□ -0.47
VPS26B-206ENST00000531741 SPATA25Q9BR10 227 aa12.14□□□□□ -0.47
VPS26B-206ENST00000531741 IGLV5-45A0A087WSX0 123 aa12.14□□□□□ -0.47
VPS26B-206ENST00000531741 TIRAPP58753 221 aa12.14□□□□□ -0.47
VPS26B-206ENST00000531741 SPANXDQ9BXN6 97 aa12.14□□□□□ -0.47
VPS26B-206ENST00000531741 ESM1Q9NQ30 184 aa12.14□□□□□ -0.47
VPS26B-206ENST00000531741 SPANXCQ9NY87 97 aa12.14□□□□□ -0.47
VPS26B-206ENST00000531741 CENPEQ02224 2701 aa12.14□□□□□ -0.47
VPS26B-206ENST00000531741 ABCA12Q86UK0 2595 aa12.13□□□□□ -0.47
VPS26B-206ENST00000531741 CMC4P56277 68 aaPredicted RBP12.13□□□□□ -0.47
VPS26B-206ENST00000531741 TRAV8-3A0A0A6YYJ7 113 aa12.12□□□□□ -0.47
VPS26B-206ENST00000531741 TRBV10-1A0A0K0K1A3 114 aa12.12□□□□□ -0.47
VPS26B-206ENST00000531741 RNASE13Q5GAN3 156 aaKnown RBP12.12□□□□□ -0.47
VPS26B-206ENST00000531741 HIST2H2BDQ6DRA6 164 aa12.12□□□□□ -0.47
VPS26B-206ENST00000531741 SFTA2Q6UW10 78 aa12.12□□□□□ -0.47
VPS26B-206ENST00000531741 NDUFA12Q9UI09 145 aa12.12□□□□□ -0.47
VPS26B-206ENST00000531741 IGHV3-38A0A0C4DH36 116 aa12.12□□□□□ -0.47
VPS26B-206ENST00000531741 GAGE12HA6NDE8 117 aa12.12□□□□□ -0.47
VPS26B-206ENST00000531741 FOXI1Q12951 378 aa12.12□□□□□ -0.47
VPS26B-206ENST00000531741 ERG28Q9UKR5 140 aa12.12□□□□□ -0.47
VPS26B-206ENST00000531741 TSSC4Q9Y5U2 329 aaPredicted RBP12.12□□□□□ -0.47
VPS26B-206ENST00000531741 MYO9AB2RTY4 2548 aa12.12□□□□□ -0.47
VPS26B-206ENST00000531741 ZFAND6Q6FIF0 208 aa12.11□□□□□ -0.47
VPS26B-206ENST00000531741 RNF183Q96D59 192 aa12.11□□□□□ -0.47
VPS26B-206ENST00000531741 C16orf95Q9H693 158 aa12.11□□□□□ -0.47
VPS26B-206ENST00000531741 GEMIN7Q9H840 131 aaKnown RBP12.11□□□□□ -0.47
VPS26B-206ENST00000531741 TRGV1A0A0A0MS02 117 aa12.1□□□□□ -0.47
VPS26B-206ENST00000531741 A0A1W2PRX2 142 aa12.1□□□□□ -0.47
VPS26B-206ENST00000531741 M0QXV9 152 aa12.1□□□□□ -0.47
VPS26B-206ENST00000531741 TIMM17BO60830 172 aa12.1□□□□□ -0.47
VPS26B-206ENST00000531741 SCGB1C2P0DMR2 95 aa12.1□□□□□ -0.47
VPS26B-206ENST00000531741 FAM19A3Q7Z5A8 133 aa12.1□□□□□ -0.47
VPS26B-206ENST00000531741 SIGMAR1Q99720 223 aa12.1□□□□□ -0.47
VPS26B-206ENST00000531741 FAM110AQ9BQ89 295 aa12.1□□□□□ -0.47
VPS26B-206ENST00000531741 CSDC2Q9Y534 153 aaKnown RBP12.1□□□□□ -0.47
VPS26B-206ENST00000531741 TRAV4A0A0B4J268 109 aa12.09□□□□□ -0.47
VPS26B-206ENST00000531741 SCGB1A1P11684 91 aa12.09□□□□□ -0.47
VPS26B-206ENST00000531741 INSL3P51460 131 aa12.09□□□□□ -0.47
VPS26B-206ENST00000531741 TEN1Q86WV5 123 aa12.09□□□□□ -0.47
VPS26B-206ENST00000531741 ZNF418Q8TF45 676 aaPredicted RBP12.09□□□□□ -0.47
VPS26B-206ENST00000531741 CITED2Q99967 270 aaPredicted RBP12.09□□□□□ -0.47
VPS26B-206ENST00000531741 ADARB2-AS1A8MUL3 147 aa12.08□□□□□ -0.48
VPS26B-206ENST00000531741 K7EQD1 137 aa12.08□□□□□ -0.48
VPS26B-206ENST00000531741 SPINK8P0C7L1 97 aa12.08□□□□□ -0.48
VPS26B-206ENST00000531741 RPL36AP83881 106 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms