RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 RPP21Q9H633 154 aaKnown RBP8.55□□□□□ -1.04
SF3B2-212ENST00000531589 C9JQL5 133 aa8.54□□□□□ -1.04
SF3B2-212ENST00000531589 UBE2L6O14933 153 aa8.54□□□□□ -1.04
SF3B2-212ENST00000531589 COTL1Q14019 142 aa8.54□□□□□ -1.04
SF3B2-212ENST00000531589 CIRBP-AS1Q8TBR5 109 aa8.54□□□□□ -1.04
SF3B2-212ENST00000531589 CNFNQ9BYD5 112 aa8.54□□□□□ -1.04
SF3B2-212ENST00000531589 FLG2Q5D862 2391 aaPredicted RBP8.53□□□□□ -1.04
SF3B2-212ENST00000531589 TMEM250H0YL14 139 aa8.53□□□□□ -1.04
SF3B2-212ENST00000531589 PRSS1P07477 247 aa8.53□□□□□ -1.04
SF3B2-212ENST00000531589 C9orf163Q8N9P6 203 aa8.53□□□□□ -1.04
SF3B2-212ENST00000531589 OCC1Q8TAD7 63 aa8.53□□□□□ -1.04
SF3B2-212ENST00000531589 VPS13BQ7Z7G8 4022 aa8.53□□□□□ -1.04
SF3B2-212ENST00000531589 SRP19P09132 144 aaKnown RBP8.52□□□□□ -1.05
SF3B2-212ENST00000531589 AMTP48728 403 aa8.52□□□□□ -1.05
SF3B2-212ENST00000531589 C20orf203Q8NBC4 194 aa8.52□□□□□ -1.05
SF3B2-212ENST00000531589 RNASE7Q9H1E1 156 aaKnown RBP8.52□□□□□ -1.05
SF3B2-212ENST00000531589 HERC1Q15751 4861 aa8.51□□□□□ -1.05
SF3B2-212ENST00000531589 IGLV10-54A0A075B6I4 117 aa8.51□□□□□ -1.05
SF3B2-212ENST00000531589 K7EN84 100 aa8.51□□□□□ -1.05
SF3B2-212ENST00000531589 KRTAP26-1Q6PEX3 210 aa8.51□□□□□ -1.05
SF3B2-212ENST00000531589 A8MWL6 223 aa8.5□□□□□ -1.05
SF3B2-212ENST00000531589 KRTAP29-1A8MX34 341 aaPredicted RBP8.5□□□□□ -1.05
SF3B2-212ENST00000531589 GATCO43716 136 aaKnown RBP8.5□□□□□ -1.05
SF3B2-212ENST00000531589 AP5S1Q9NUS5 200 aa8.5□□□□□ -1.05
SF3B2-212ENST00000531589 MYCBP2O75592 4640 aa8.5□□□□□ -1.05
SF3B2-212ENST00000531589 IGLV4-60A0A075B6I1 120 aa8.49□□□□□ -1.05
SF3B2-212ENST00000531589 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.49□□□□□ -1.05
SF3B2-212ENST00000531589 NCR2O95944 276 aa8.49□□□□□ -1.05
SF3B2-212ENST00000531589 FAM231DQ6ZW35 169 aa8.49□□□□□ -1.05
SF3B2-212ENST00000531589 GATD1Q8NB37 220 aa8.49□□□□□ -1.05
SF3B2-212ENST00000531589 BORCS7Q96B45 105 aa8.49□□□□□ -1.05
SF3B2-212ENST00000531589 SMIM7Q9BQ49 75 aa8.49□□□□□ -1.05
SF3B2-212ENST00000531589 hDV102S1A0JD36 115 aa8.48□□□□□ -1.05
SF3B2-212ENST00000531589 H7C423 109 aa8.48□□□□□ -1.05
SF3B2-212ENST00000531589 RAB14P61106 215 aa8.48□□□□□ -1.05
SF3B2-212ENST00000531589 CNBPP62633 177 aaKnown RBP8.48□□□□□ -1.05
SF3B2-212ENST00000531589 AMMECR1LQ6DCA0 310 aa8.48□□□□□ -1.05
SF3B2-212ENST00000531589 GTSF1Q8WW33 167 aa8.48□□□□□ -1.05
SF3B2-212ENST00000531589 TRAV26-2A0A0B4J265 109 aa8.47□□□□□ -1.05
SF3B2-212ENST00000531589 ZNF727A8MUV8 499 aa8.47□□□□□ -1.05
SF3B2-212ENST00000531589 CT83Q5H943 113 aa8.47□□□□□ -1.05
SF3B2-212ENST00000531589 CFAP161Q6P656 301 aa8.47□□□□□ -1.05
SF3B2-212ENST00000531589 NDUFS6O75380 124 aaKnown RBP8.46□□□□□ -1.06
SF3B2-212ENST00000531589 APCSP02743 223 aa8.46□□□□□ -1.06
SF3B2-212ENST00000531589 FOXA3P55318 350 aaPredicted RBP8.46□□□□□ -1.06
SF3B2-212ENST00000531589 RPL37AP61513 92 aaKnown RBP8.46□□□□□ -1.06
SF3B2-212ENST00000531589 PEA15Q15121 130 aa8.46□□□□□ -1.06
SF3B2-212ENST00000531589 CLLU1Q5K131 121 aa8.46□□□□□ -1.06
SF3B2-212ENST00000531589 SDIM1Q6ZPB5 146 aa8.46□□□□□ -1.06
SF3B2-212ENST00000531589 IGHV3-64A0A075B6Q5 118 aa8.45□□□□□ -1.06
SF3B2-212ENST00000531589 SDHAF1A6NFY7 115 aa8.45□□□□□ -1.06
SF3B2-212ENST00000531589 OXTP01178 125 aa8.45□□□□□ -1.06
SF3B2-212ENST00000531589 RPL39LQ96EH5 51 aaKnown RBP8.45□□□□□ -1.06
SF3B2-212ENST00000531589 DPH3Q96FX2 82 aa8.45□□□□□ -1.06
SF3B2-212ENST00000531589 GFRA4Q9GZZ7 299 aa8.45□□□□□ -1.06
SF3B2-212ENST00000531589 IGKV3OR2-268A0A0C4DH90 116 aa8.44□□□□□ -1.06
SF3B2-212ENST00000531589 FAM231BA6NCW3 169 aa8.44□□□□□ -1.06
SF3B2-212ENST00000531589 I3L3M4 83 aa8.44□□□□□ -1.06
SF3B2-212ENST00000531589 ZNF25P17030 456 aaPredicted RBP8.44□□□□□ -1.06
SF3B2-212ENST00000531589 PMCHP20382 165 aa8.44□□□□□ -1.06
SF3B2-212ENST00000531589 KRTAP10-4P60372 401 aaPredicted RBP8.44□□□□□ -1.06
SF3B2-212ENST00000531589 RNASEKQ6P5S7 137 aaKnown RBP8.44□□□□□ -1.06
SF3B2-212ENST00000531589 LINC01551Q86U37 167 aa8.44□□□□□ -1.06
SF3B2-212ENST00000531589 BTF3L4Q96K17 158 aa8.44□□□□□ -1.06
SF3B2-212ENST00000531589 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.44□□□□□ -1.06
SF3B2-212ENST00000531589 TRBV6-5A0A0K0K1A5 114 aa8.43□□□□□ -1.06
SF3B2-212ENST00000531589 A0A1B0GUT8 65 aa8.43□□□□□ -1.06
SF3B2-212ENST00000531589 GAGE12HA6NDE8 117 aa8.43□□□□□ -1.06
SF3B2-212ENST00000531589 FGF6P10767 208 aa8.43□□□□□ -1.06
SF3B2-212ENST00000531589 ADIRFQ15847 76 aa8.43□□□□□ -1.06
SF3B2-212ENST00000531589 TSKUQ8WUA8 353 aa8.43□□□□□ -1.06
SF3B2-212ENST00000531589 RNF185Q96GF1 192 aa8.43□□□□□ -1.06
SF3B2-212ENST00000531589 TMEM101Q96IK0 257 aa8.43□□□□□ -1.06
SF3B2-212ENST00000531589 HIGD1CA8MV81 97 aa8.42□□□□□ -1.06
SF3B2-212ENST00000531589 RPL23P62829 140 aaKnown RBP8.42□□□□□ -1.06
SF3B2-212ENST00000531589 TMEM241Q24JQ0 296 aa8.42□□□□□ -1.06
SF3B2-212ENST00000531589 TMEM191AQ9H0A3 160 aa8.42□□□□□ -1.06
SF3B2-212ENST00000531589 ST20Q9HBF5 79 aa8.42□□□□□ -1.06
SF3B2-212ENST00000531589 OSTCQ9NRP0 149 aa8.42□□□□□ -1.06
SF3B2-212ENST00000531589 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.41□□□□□ -1.06
SF3B2-212ENST00000531589 IGKV2-29A2NJV5 120 aaPredicted RBP8.41□□□□□ -1.06
SF3B2-212ENST00000531589 CIRBPQ14011 172 aaKnown RBP8.41□□□□□ -1.06
SF3B2-212ENST00000531589 CHCHD10Q8WYQ3 142 aaPredicted RBP8.41□□□□□ -1.06
SF3B2-212ENST00000531589 SLPIP03973 132 aa8.4□□□□□ -1.06
SF3B2-212ENST00000531589 RPS10P46783 165 aaKnown RBP8.4□□□□□ -1.06
SF3B2-212ENST00000531589 SERTAD4-AS1Q5TG53 156 aa8.4□□□□□ -1.06
SF3B2-212ENST00000531589 COMMD7Q86VX2 200 aa8.4□□□□□ -1.06
SF3B2-212ENST00000531589 C15orf56Q8N910 161 aa8.4□□□□□ -1.06
SF3B2-212ENST00000531589 OR5A1Q8NGJ0 315 aa8.4□□□□□ -1.06
SF3B2-212ENST00000531589 ISOC2Q96AB3 205 aa8.4□□□□□ -1.06
SF3B2-212ENST00000531589 MRAP2Q96G30 205 aa8.4□□□□□ -1.06
SF3B2-212ENST00000531589 NAT8Q9UHE5 227 aa8.4□□□□□ -1.06
SF3B2-212ENST00000531589 PANO1I0J062 215 aa8.39□□□□□ -1.07
SF3B2-212ENST00000531589 PPP1R17O96001 155 aa8.39□□□□□ -1.07
SF3B2-212ENST00000531589 RIGQ13278 110 aa8.39□□□□□ -1.07
SF3B2-212ENST00000531589 ESDP10768 282 aa8.38□□□□□ -1.07
SF3B2-212ENST00000531589 RAB4AP20338 218 aa8.38□□□□□ -1.07
SF3B2-212ENST00000531589 SMAGPQ0VAQ4 97 aa8.38□□□□□ -1.07
SF3B2-212ENST00000531589 FAM74A3Q4VXF1 159 aa8.38□□□□□ -1.07
SF3B2-212ENST00000531589 PKIGQ9Y2B9 76 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms