RNA–Protein interactions for RNA: ENST00000531504.5

HIPK3-205, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 2

Gene HIPK3, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-205ENST00000531504 TRBV6-4A0A1B0GX49 114 aa12.95□□□□□ -0.34
HIPK3-205ENST00000531504 SCO1O75880 301 aa12.95□□□□□ -0.34
HIPK3-205ENST00000531504 NTF3P20783 257 aa12.95□□□□□ -0.34
HIPK3-205ENST00000531504 SSTP61278 116 aa12.95□□□□□ -0.34
HIPK3-205ENST00000531504 DMRTA1Q5VZB9 504 aa12.95□□□□□ -0.34
HIPK3-205ENST00000531504 A0A1B0GW15 77 aa12.94□□□□□ -0.34
HIPK3-205ENST00000531504 ELOBQ15370 118 aa12.94□□□□□ -0.34
HIPK3-205ENST00000531504 TWIST1Q15672 202 aa12.94□□□□□ -0.34
HIPK3-205ENST00000531504 MRPL54Q6P161 138 aaKnown RBP12.94□□□□□ -0.34
HIPK3-205ENST00000531504 ATP5L2Q7Z4Y8 100 aa12.94□□□□□ -0.34
HIPK3-205ENST00000531504 Q8N3U1 123 aa12.93□□□□□ -0.34
HIPK3-205ENST00000531504 YPEL4Q96NS1 127 aa12.93□□□□□ -0.34
HIPK3-205ENST00000531504 A0A1B0GXF2 115 aa12.92□□□□□ -0.34
HIPK3-205ENST00000531504 S100A8P05109 93 aa12.92□□□□□ -0.34
HIPK3-205ENST00000531504 TRGC1P0CF51 173 aa12.92□□□□□ -0.34
HIPK3-205ENST00000531504 HBBP68871 147 aa12.92□□□□□ -0.34
HIPK3-205ENST00000531504 DAZ4Q86SG3 579 aaKnown RBP12.92□□□□□ -0.34
HIPK3-205ENST00000531504 DAZ3Q9NR90 486 aaKnown RBP12.92□□□□□ -0.34
HIPK3-205ENST00000531504 PKHD1L1Q86WI1 4243 aa12.92□□□□□ -0.34
HIPK3-205ENST00000531504 TRBV24-1A0A075B6N3 115 aa12.91□□□□□ -0.34
HIPK3-205ENST00000531504 MT1HL1P0DM35 61 aa12.91□□□□□ -0.34
HIPK3-205ENST00000531504 HNRNPA3P51991 378 aaKnown RBP12.91□□□□□ -0.34
HIPK3-205ENST00000531504 AP1S3Q96PC3 154 aa12.91□□□□□ -0.34
HIPK3-205ENST00000531504 TGIF2-C20orf24A0A0A6YYL0 155 aa12.9□□□□□ -0.34
HIPK3-205ENST00000531504 A8MWV9 139 aa12.9□□□□□ -0.34
HIPK3-205ENST00000531504 RASL11AQ6T310 242 aa12.9□□□□□ -0.34
HIPK3-205ENST00000531504 IGKV2D-24A0A075B6R9 120 aa12.89□□□□□ -0.35
HIPK3-205ENST00000531504 CAMPP49913 170 aa12.89□□□□□ -0.35
HIPK3-205ENST00000531504 CFAP126Q5VTH2 177 aa12.89□□□□□ -0.35
HIPK3-205ENST00000531504 SMIM15Q7Z3B0 74 aa12.89□□□□□ -0.35
HIPK3-205ENST00000531504 JPT2Q9H910 190 aa12.89□□□□□ -0.35
HIPK3-205ENST00000531504 COX19Q49B96 90 aa12.88□□□□□ -0.35
HIPK3-205ENST00000531504 GATD1Q8NB37 220 aa12.88□□□□□ -0.35
HIPK3-205ENST00000531504 TMEM191AQ9H0A3 160 aa12.88□□□□□ -0.35
HIPK3-205ENST00000531504 IGHV3-73A0A0B4J1V6 119 aa12.87□□□□□ -0.35
HIPK3-205ENST00000531504 SMIM17P0DL12 118 aa12.87□□□□□ -0.35
HIPK3-205ENST00000531504 C14orf177Q52M58 125 aa12.87□□□□□ -0.35
HIPK3-205ENST00000531504 C14orf178Q8N769 122 aaPredicted RBP12.87□□□□□ -0.35
HIPK3-205ENST00000531504 DPH3P1Q9H4G8 78 aa12.87□□□□□ -0.35
HIPK3-205ENST00000531504 RNF213Q63HN8 5207 aa12.87□□□□□ -0.35
HIPK3-205ENST00000531504 Q6ZRU5 148 aa12.86□□□□□ -0.35
HIPK3-205ENST00000531504 SAMD10Q9BYL1 202 aa12.86□□□□□ -0.35
HIPK3-205ENST00000531504 KIF25-AS1Q9Y6Z4 181 aa12.86□□□□□ -0.35
HIPK3-205ENST00000531504 A0A087WWL8 130 aa12.85□□□□□ -0.35
HIPK3-205ENST00000531504 COLCA2A8K830 154 aa12.85□□□□□ -0.35
HIPK3-205ENST00000531504 RHODO00212 210 aa12.85□□□□□ -0.35
HIPK3-205ENST00000531504 RAB4BP61018 213 aa12.85□□□□□ -0.35
HIPK3-205ENST00000531504 LRP2P98164 4655 aa12.84□□□□□ -0.35
HIPK3-205ENST00000531504 FAM74A4Q5TZK3 123 aa12.84□□□□□ -0.35
HIPK3-205ENST00000531504 UFSP1Q6NVU6 142 aa12.84□□□□□ -0.35
HIPK3-205ENST00000531504 ZFP2Q6ZN57 461 aa12.84□□□□□ -0.35
HIPK3-205ENST00000531504 TMEM136Q6ZRR5 245 aa12.84□□□□□ -0.35
HIPK3-205ENST00000531504 GNB1LQ9BYB4 327 aa12.84□□□□□ -0.35
HIPK3-205ENST00000531504 HLA-DQA1P01909 254 aa12.82□□□□□ -0.36
HIPK3-205ENST00000531504 MT-ND6P03923 174 aa12.82□□□□□ -0.36
HIPK3-205ENST00000531504 MGPP08493 103 aa12.82□□□□□ -0.36
HIPK3-205ENST00000531504 FAM104BQ5XKR9 115 aa12.82□□□□□ -0.36
HIPK3-205ENST00000531504 GAGE12JA6NER3 117 aa12.81□□□□□ -0.36
HIPK3-205ENST00000531504 GAGE1Q13065 139 aa12.81□□□□□ -0.36
HIPK3-205ENST00000531504 GAGE4Q13068 117 aa12.81□□□□□ -0.36
HIPK3-205ENST00000531504 GAGE5Q13069 117 aa12.81□□□□□ -0.36
HIPK3-205ENST00000531504 ZNF56Q15929 161 aa12.81□□□□□ -0.36
HIPK3-205ENST00000531504 GAGE13Q4V321 117 aa12.81□□□□□ -0.36
HIPK3-205ENST00000531504 AMN1Q8IY45 258 aa12.81□□□□□ -0.36
HIPK3-205ENST00000531504 RNF185Q96GF1 192 aa12.81□□□□□ -0.36
HIPK3-205ENST00000531504 KLK12Q9UKR0 248 aa12.81□□□□□ -0.36
HIPK3-205ENST00000531504 LINC00694P0DN24 101 aa12.8□□□□□ -0.36
HIPK3-205ENST00000531504 RAB4AP20338 218 aa12.8□□□□□ -0.36
HIPK3-205ENST00000531504 RAB5AP20339 215 aa12.8□□□□□ -0.36
HIPK3-205ENST00000531504 UBE2WQ96B02 151 aa12.8□□□□□ -0.36
HIPK3-205ENST00000531504 F5H697 171 aa12.79□□□□□ -0.36
HIPK3-205ENST00000531504 NIT1Q86X76 327 aa12.79□□□□□ -0.36
HIPK3-205ENST00000531504 TRAPPC1Q9Y5R8 145 aa12.79□□□□□ -0.36
HIPK3-205ENST00000531504 APCSP02743 223 aa12.78□□□□□ -0.36
HIPK3-205ENST00000531504 RPS10P46783 165 aaKnown RBP12.78□□□□□ -0.36
HIPK3-205ENST00000531504 MRPL51Q4U2R6 128 aaKnown RBP12.78□□□□□ -0.36
HIPK3-205ENST00000531504 DNAJC30Q96LL9 226 aa12.78□□□□□ -0.36
HIPK3-205ENST00000531504 MRPL18Q9H0U6 180 aaKnown RBP12.78□□□□□ -0.36
HIPK3-205ENST00000531504 A0A087WX48 190 aa12.77□□□□□ -0.37
HIPK3-205ENST00000531504 Q0VG73 95 aa12.77□□□□□ -0.37
HIPK3-205ENST00000531504 SUMO4Q6EEV6 95 aa12.77□□□□□ -0.37
HIPK3-205ENST00000531504 MRAP2Q96G30 205 aa12.77□□□□□ -0.37
HIPK3-205ENST00000531504 CHCHD7Q9BUK0 85 aa12.77□□□□□ -0.37
HIPK3-205ENST00000531504 C1orf43Q9BWL3 253 aa12.76□□□□□ -0.37
HIPK3-205ENST00000531504 H7C1H1 209 aa12.75□□□□□ -0.37
HIPK3-205ENST00000531504 FABP9Q0Z7S8 132 aa12.75□□□□□ -0.37
HIPK3-205ENST00000531504 TRAV26-2A0A0B4J265 109 aa12.74□□□□□ -0.37
HIPK3-205ENST00000531504 M0QY20 66 aa12.74□□□□□ -0.37
HIPK3-205ENST00000531504 PPBPP02775 128 aa12.74□□□□□ -0.37
HIPK3-205ENST00000531504 CKS2P33552 79 aa12.74□□□□□ -0.37
HIPK3-205ENST00000531504 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.74□□□□□ -0.37
HIPK3-205ENST00000531504 TNXBP22105 4242 aa12.73□□□□□ -0.37
HIPK3-205ENST00000531504 D6R8Y8 96 aa12.73□□□□□ -0.37
HIPK3-205ENST00000531504 ORMDL3Q8N138 153 aa12.73□□□□□ -0.37
HIPK3-205ENST00000531504 SMKR1H3BMG3 65 aa12.72□□□□□ -0.37
HIPK3-205ENST00000531504 NCR2O95944 276 aa12.72□□□□□ -0.37
HIPK3-205ENST00000531504 KIAA1644Q3SXP7 199 aa12.72□□□□□ -0.37
HIPK3-205ENST00000531504 DGAT2L7PQ6IED9 249 aa12.72□□□□□ -0.37
HIPK3-205ENST00000531504 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.72□□□□□ -0.37
HIPK3-205ENST00000531504 TRBV10-1A0A0K0K1A3 114 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms