RNA–Protein interactions for RNA: ENST00000531385.1

PTPRU-211, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-211ENST00000531385 GFRA4Q9GZZ7 299 aa12.37□□□□□ -0.43
PTPRU-211ENST00000531385 COTL1Q14019 142 aa12.36□□□□□ -0.43
PTPRU-211ENST00000531385 AMTP48728 403 aa12.35□□□□□ -0.43
PTPRU-211ENST00000531385 PKIAP61925 76 aa12.35□□□□□ -0.43
PTPRU-211ENST00000531385 Q0VG73 95 aa12.35□□□□□ -0.43
PTPRU-211ENST00000531385 AMN1Q8IY45 258 aa12.35□□□□□ -0.43
PTPRU-211ENST00000531385 LINC00269Q8N2A0 174 aa12.35□□□□□ -0.43
PTPRU-211ENST00000531385 NTN5Q8WTR8 489 aaPredicted RBP12.35□□□□□ -0.43
PTPRU-211ENST00000531385 RNF185Q96GF1 192 aa12.35□□□□□ -0.43
PTPRU-211ENST00000531385 C1orf43Q9BWL3 253 aa12.35□□□□□ -0.43
PTPRU-211ENST00000531385 COX11Q9Y6N1 276 aa12.35□□□□□ -0.43
PTPRU-211ENST00000531385 IGLV4-60A0A075B6I1 120 aa12.34□□□□□ -0.43
PTPRU-211ENST00000531385 FAM231BA6NCW3 169 aa12.34□□□□□ -0.43
PTPRU-211ENST00000531385 XGP55808 180 aa12.34□□□□□ -0.43
PTPRU-211ENST00000531385 C20orf203Q8NBC4 194 aa12.34□□□□□ -0.43
PTPRU-211ENST00000531385 SMDT1Q9H4I9 107 aa12.34□□□□□ -0.43
PTPRU-211ENST00000531385 FRZBQ92765 325 aa12.33□□□□□ -0.44
PTPRU-211ENST00000531385 TMEM191AQ9H0A3 160 aa12.33□□□□□ -0.44
PTPRU-211ENST00000531385 SDHAF1A6NFY7 115 aa12.32□□□□□ -0.44
PTPRU-211ENST00000531385 SMKR1H3BMG3 65 aa12.32□□□□□ -0.44
PTPRU-211ENST00000531385 NCR2O95944 276 aa12.32□□□□□ -0.44
PTPRU-211ENST00000531385 HLA-DQA1P01909 254 aa12.32□□□□□ -0.44
PTPRU-211ENST00000531385 RPS10P46783 165 aaKnown RBP12.32□□□□□ -0.44
PTPRU-211ENST00000531385 LINC01620Q4KN68 170 aa12.32□□□□□ -0.44
PTPRU-211ENST00000531385 PRR34Q9NV39 138 aa12.32□□□□□ -0.44
PTPRU-211ENST00000531385 IGLV10-54A0A075B6I4 117 aa12.31□□□□□ -0.44
PTPRU-211ENST00000531385 UBE2L6O14933 153 aa12.31□□□□□ -0.44
PTPRU-211ENST00000531385 RAB4AP20338 218 aa12.31□□□□□ -0.44
PTPRU-211ENST00000531385 RIGQ13278 110 aa12.31□□□□□ -0.44
PTPRU-211ENST00000531385 NAT8BQ9UHF3 227 aa12.31□□□□□ -0.44
PTPRU-211ENST00000531385 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.3□□□□□ -0.44
PTPRU-211ENST00000531385 SMIM27A0A1W2PRY6 76 aa12.3□□□□□ -0.44
PTPRU-211ENST00000531385 IGKV2-29A2NJV5 120 aaPredicted RBP12.3□□□□□ -0.44
PTPRU-211ENST00000531385 MIAQ16674 131 aa12.3□□□□□ -0.44
PTPRU-211ENST00000531385 Q8N1X5 172 aa12.3□□□□□ -0.44
PTPRU-211ENST00000531385 RAB14P61106 215 aa12.29□□□□□ -0.44
PTPRU-211ENST00000531385 REG3AQ06141 175 aa12.29□□□□□ -0.44
PTPRU-211ENST00000531385 KRTAP26-1Q6PEX3 210 aa12.29□□□□□ -0.44
PTPRU-211ENST00000531385 FAM30AQ9NZY2 134 aa12.29□□□□□ -0.44
PTPRU-211ENST00000531385 TRBV6-5A0A0K0K1A5 114 aa12.28□□□□□ -0.44
PTPRU-211ENST00000531385 APCSP02743 223 aa12.28□□□□□ -0.44
PTPRU-211ENST00000531385 CAMPP49913 170 aa12.28□□□□□ -0.44
PTPRU-211ENST00000531385 ST20Q9HBF5 79 aa12.28□□□□□ -0.44
PTPRU-211ENST00000531385 TMEM242Q9NWH2 141 aa12.28□□□□□ -0.44
PTPRU-211ENST00000531385 USP17L23D6RBM5 183 aa12.27□□□□□ -0.45
PTPRU-211ENST00000531385 PMCHP20382 165 aa12.27□□□□□ -0.45
PTPRU-211ENST00000531385 MRPL54Q6P161 138 aaKnown RBP12.27□□□□□ -0.45
PTPRU-211ENST00000531385 MRAP2Q96G30 205 aa12.27□□□□□ -0.45
PTPRU-211ENST00000531385 TMEM70Q9BUB7 260 aa12.27□□□□□ -0.45
PTPRU-211ENST00000531385 IGKV3OR2-268A0A0C4DH90 116 aa12.26□□□□□ -0.45
PTPRU-211ENST00000531385 A0A1B0GUV1 79 aa12.26□□□□□ -0.45
PTPRU-211ENST00000531385 TSHBP01222 138 aa12.26□□□□□ -0.45
PTPRU-211ENST00000531385 IFITM2Q01629 132 aa12.26□□□□□ -0.45
PTPRU-211ENST00000531385 I3L3M4 83 aa12.25□□□□□ -0.45
PTPRU-211ENST00000531385 SMR3BP02814 79 aaPredicted RBP12.25□□□□□ -0.45
PTPRU-211ENST00000531385 MRPL51Q4U2R6 128 aaKnown RBP12.24□□□□□ -0.45
PTPRU-211ENST00000531385 CLLU1Q5K131 121 aa12.24□□□□□ -0.45
PTPRU-211ENST00000531385 AMMECR1LQ6DCA0 310 aa12.24□□□□□ -0.45
PTPRU-211ENST00000531385 RNASEKQ6P5S7 137 aaKnown RBP12.24□□□□□ -0.45
PTPRU-211ENST00000531385 NRACQ8N912 160 aa12.24□□□□□ -0.45
PTPRU-211ENST00000531385 FGF6P10767 208 aa12.23□□□□□ -0.45
PTPRU-211ENST00000531385 POLR2KP53803 58 aaKnown RBP12.23□□□□□ -0.45
PTPRU-211ENST00000531385 FAM104BQ5XKR9 115 aa12.23□□□□□ -0.45
PTPRU-211ENST00000531385 A0A1B0GXF2 115 aa12.21□□□□□ -0.45
PTPRU-211ENST00000531385 PRSS1P07477 247 aa12.21□□□□□ -0.45
PTPRU-211ENST00000531385 ESDP10768 282 aa12.21□□□□□ -0.45
PTPRU-211ENST00000531385 TRBV27A0A0K0K1C4 114 aa12.2□□□□□ -0.46
PTPRU-211ENST00000531385 HBBP68871 147 aa12.2□□□□□ -0.46
PTPRU-211ENST00000531385 C14orf177Q52M58 125 aa12.2□□□□□ -0.46
PTPRU-211ENST00000531385 TRAV8-4A0A0B4J246 113 aa12.19□□□□□ -0.46
PTPRU-211ENST00000531385 EPM2AB3EWF7 344 aa12.19□□□□□ -0.46
PTPRU-211ENST00000531385 SUMO2P61956 95 aaKnown RBP12.19□□□□□ -0.46
PTPRU-211ENST00000531385 Q6ZSA8 131 aa12.19□□□□□ -0.46
PTPRU-211ENST00000531385 A0A1B0GW15 77 aa12.18□□□□□ -0.46
PTPRU-211ENST00000531385 GAGE12HA6NDE8 117 aa12.18□□□□□ -0.46
PTPRU-211ENST00000531385 Q5VSD8 79 aa12.18□□□□□ -0.46
PTPRU-211ENST00000531385 D6R8Y8 96 aa12.17□□□□□ -0.46
PTPRU-211ENST00000531385 H7C423 109 aa12.17□□□□□ -0.46
PTPRU-211ENST00000531385 ADCYAP1P18509 176 aa12.17□□□□□ -0.46
PTPRU-211ENST00000531385 CKS2P33552 79 aa12.17□□□□□ -0.46
PTPRU-211ENST00000531385 PNRC1Q12796 327 aaPredicted RBP12.17□□□□□ -0.46
PTPRU-211ENST00000531385 VPS13BQ7Z7G8 4022 aa12.16□□□□□ -0.46
PTPRU-211ENST00000531385 C7orf77A4D0Y5 90 aa12.16□□□□□ -0.46
PTPRU-211ENST00000531385 VCYO14598 125 aa12.16□□□□□ -0.46
PTPRU-211ENST00000531385 PPP1R2P9O14990 202 aa12.16□□□□□ -0.46
PTPRU-211ENST00000531385 FCER1GP30273 86 aa12.16□□□□□ -0.46
PTPRU-211ENST00000531385 NPYP01303 97 aa12.15□□□□□ -0.46
PTPRU-211ENST00000531385 ZNF25P17030 456 aaPredicted RBP12.15□□□□□ -0.46
PTPRU-211ENST00000531385 OR5A1Q8NGJ0 315 aa12.15□□□□□ -0.46
PTPRU-211ENST00000531385 CHCHD10Q8WYQ3 142 aaPredicted RBP12.15□□□□□ -0.46
PTPRU-211ENST00000531385 BTF3L4Q96K17 158 aa12.15□□□□□ -0.46
PTPRU-211ENST00000531385 hDV102S1A0JD36 115 aa12.14□□□□□ -0.47
PTPRU-211ENST00000531385 F8W036 122 aa12.14□□□□□ -0.47
PTPRU-211ENST00000531385 TNFRSF6BO95407 300 aa12.14□□□□□ -0.47
PTPRU-211ENST00000531385 PPP1R17O96001 155 aa12.14□□□□□ -0.47
PTPRU-211ENST00000531385 MT-ND4LP03901 98 aa12.14□□□□□ -0.47
PTPRU-211ENST00000531385 S100A8P05109 93 aa12.14□□□□□ -0.47
PTPRU-211ENST00000531385 TMEM101Q96IK0 257 aa12.14□□□□□ -0.47
PTPRU-211ENST00000531385 SCXQ7RTU7 201 aa12.13□□□□□ -0.47
PTPRU-211ENST00000531385 ATP5L2Q7Z4Y8 100 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms