RNA–Protein interactions for RNA: ENST00000531336.1

SMPD1-206, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 2

Gene SMPD1, Length 650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-206ENST00000531336 TNFRSF6BO95407 300 aa9.35□□□□□ -0.91
SMPD1-206ENST00000531336 APCSP02743 223 aa9.35□□□□□ -0.91
SMPD1-206ENST00000531336 PPBPP02775 128 aa9.35□□□□□ -0.91
SMPD1-206ENST00000531336 POLR2KP53803 58 aaKnown RBP9.35□□□□□ -0.91
SMPD1-206ENST00000531336 PRELID3AQ96N28 172 aa9.35□□□□□ -0.91
SMPD1-206ENST00000531336 DNAH10Q8IVF4 4471 aa9.34□□□□□ -0.91
SMPD1-206ENST00000531336 DNAH2Q9P225 4427 aa9.34□□□□□ -0.91
SMPD1-206ENST00000531336 K7EP13 123 aa9.34□□□□□ -0.91
SMPD1-206ENST00000531336 UBE2L6O14933 153 aa9.34□□□□□ -0.91
SMPD1-206ENST00000531336 TSHBP01222 138 aa9.34□□□□□ -0.91
SMPD1-206ENST00000531336 HLA-DQA1P01909 254 aa9.34□□□□□ -0.91
SMPD1-206ENST00000531336 PKIAP61925 76 aa9.34□□□□□ -0.91
SMPD1-206ENST00000531336 MPV17L2Q567V2 206 aa9.34□□□□□ -0.91
SMPD1-206ENST00000531336 CHCHD7Q9BUK0 85 aa9.34□□□□□ -0.91
SMPD1-206ENST00000531336 TRBV24-1A0A075B6N3 115 aa9.33□□□□□ -0.92
SMPD1-206ENST00000531336 TRBV27A0A0K0K1C4 114 aa9.33□□□□□ -0.92
SMPD1-206ENST00000531336 VCYO14598 125 aa9.33□□□□□ -0.92
SMPD1-206ENST00000531336 ELOBQ15370 118 aa9.33□□□□□ -0.92
SMPD1-206ENST00000531336 C20orf78Q9BR46 151 aa9.33□□□□□ -0.92
SMPD1-206ENST00000531336 Q9HAA7 133 aa9.33□□□□□ -0.92
SMPD1-206ENST00000531336 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.32□□□□□ -0.92
SMPD1-206ENST00000531336 IGKV2-29A2NJV5 120 aaPredicted RBP9.32□□□□□ -0.92
SMPD1-206ENST00000531336 IBA57-AS1B1ANH7 110 aa9.32□□□□□ -0.92
SMPD1-206ENST00000531336 PHOX2AO14813 284 aa9.32□□□□□ -0.92
SMPD1-206ENST00000531336 FCER1GP30273 86 aa9.32□□□□□ -0.92
SMPD1-206ENST00000531336 KIAA1644Q3SXP7 199 aa9.32□□□□□ -0.92
SMPD1-206ENST00000531336 COX19Q49B96 90 aa9.32□□□□□ -0.92
SMPD1-206ENST00000531336 CBLN2Q8IUK8 224 aa9.32□□□□□ -0.92
SMPD1-206ENST00000531336 Q8N976 141 aa9.32□□□□□ -0.92
SMPD1-206ENST00000531336 SMIM2Q9BVW6 85 aa9.32□□□□□ -0.92
SMPD1-206ENST00000531336 GNB1LQ9BYB4 327 aa9.32□□□□□ -0.92
SMPD1-206ENST00000531336 KLK12Q9UKR0 248 aa9.32□□□□□ -0.92
SMPD1-206ENST00000531336 FRAS1Q86XX4 4008 aa9.32□□□□□ -0.92
SMPD1-206ENST00000531336 ANGP03950 147 aaKnown RBP9.31□□□□□ -0.92
SMPD1-206ENST00000531336 BTF3P20290 206 aaKnown RBP9.31□□□□□ -0.92
SMPD1-206ENST00000531336 RBX1P62877 108 aa9.31□□□□□ -0.92
SMPD1-206ENST00000531336 KIR2DL4Q99706 377 aa9.31□□□□□ -0.92
SMPD1-206ENST00000531336 MT-ND6P03923 174 aa9.3□□□□□ -0.92
SMPD1-206ENST00000531336 RPL32P62910 135 aaKnown RBP9.3□□□□□ -0.92
SMPD1-206ENST00000531336 LAGE3Q14657 143 aa9.3□□□□□ -0.92
SMPD1-206ENST00000531336 LINC00336Q6ZUF6 198 aa9.3□□□□□ -0.92
SMPD1-206ENST00000531336 MRPL18Q9H0U6 180 aaKnown RBP9.3□□□□□ -0.92
SMPD1-206ENST00000531336 MAP1LC3AQ9H492 121 aa9.3□□□□□ -0.92
SMPD1-206ENST00000531336 LAMTOR2Q9Y2Q5 125 aa9.3□□□□□ -0.92
SMPD1-206ENST00000531336 DNAH17Q9UFH2 4485 aa9.3□□□□□ -0.92
SMPD1-206ENST00000531336 LOC389332A0A1B0GUA5 103 aa9.29□□□□□ -0.92
SMPD1-206ENST00000531336 PRSS29PA6NIE9 313 aa9.29□□□□□ -0.92
SMPD1-206ENST00000531336 FABP9Q0Z7S8 132 aa9.29□□□□□ -0.92
SMPD1-206ENST00000531336 CLPSL2Q6UWE3 100 aa9.29□□□□□ -0.92
SMPD1-206ENST00000531336 Q6ZRN7 208 aaPredicted RBP9.29□□□□□ -0.92
SMPD1-206ENST00000531336 NFE4Q86UQ8 179 aa9.29□□□□□ -0.92
SMPD1-206ENST00000531336 UBE2WQ96B02 151 aa9.29□□□□□ -0.92
SMPD1-206ENST00000531336 YPEL4Q96NS1 127 aa9.29□□□□□ -0.92
SMPD1-206ENST00000531336 SMCO4Q9NRQ5 59 aa9.29□□□□□ -0.92
SMPD1-206ENST00000531336 IGLV4-60A0A075B6I1 120 aa9.28□□□□□ -0.92
SMPD1-206ENST00000531336 CRPP02741 224 aa9.28□□□□□ -0.92
SMPD1-206ENST00000531336 ESDP10768 282 aa9.28□□□□□ -0.92
SMPD1-206ENST00000531336 AMMECR1LQ6DCA0 310 aa9.28□□□□□ -0.92
SMPD1-206ENST00000531336 RNASEKQ6P5S7 137 aaKnown RBP9.28□□□□□ -0.92
SMPD1-206ENST00000531336 TRAPPC1Q9Y5R8 145 aa9.28□□□□□ -0.92
SMPD1-206ENST00000531336 TRAV8-3A0A0A6YYJ7 113 aa9.27□□□□□ -0.93
SMPD1-206ENST00000531336 TCAPO15273 167 aa9.27□□□□□ -0.93
SMPD1-206ENST00000531336 FGF6P10767 208 aa9.27□□□□□ -0.93
SMPD1-206ENST00000531336 TNP2Q05952 138 aa9.27□□□□□ -0.93
SMPD1-206ENST00000531336 C20orf203Q8NBC4 194 aa9.27□□□□□ -0.93
SMPD1-206ENST00000531336 A0A1B0GUV1 79 aa9.26□□□□□ -0.93
SMPD1-206ENST00000531336 H7C423 109 aa9.26□□□□□ -0.93
SMPD1-206ENST00000531336 PSCAO43653 123 aa9.26□□□□□ -0.93
SMPD1-206ENST00000531336 LINC00269Q8N2A0 174 aa9.26□□□□□ -0.93
SMPD1-206ENST00000531336 FAT2Q9NYQ8 4349 aa9.26□□□□□ -0.93
SMPD1-206ENST00000531336 PRSS47A8MTI9 375 aa9.25□□□□□ -0.93
SMPD1-206ENST00000531336 RAB5AP20339 215 aa9.25□□□□□ -0.93
SMPD1-206ENST00000531336 Q0VG73 95 aa9.25□□□□□ -0.93
SMPD1-206ENST00000531336 ENHOQ6UWT2 76 aa9.25□□□□□ -0.93
SMPD1-206ENST00000531336 Q8N8P6 123 aa9.25□□□□□ -0.93
SMPD1-206ENST00000531336 RMI2Q96E14 147 aa9.25□□□□□ -0.93
SMPD1-206ENST00000531336 ALKBH7Q9BT30 221 aaPredicted RBP9.25□□□□□ -0.93
SMPD1-206ENST00000531336 IGKV2D-24A0A075B6R9 120 aa9.24□□□□□ -0.93
SMPD1-206ENST00000531336 ZNF25P17030 456 aaPredicted RBP9.24□□□□□ -0.93
SMPD1-206ENST00000531336 TMEM18Q96B42 140 aa9.24□□□□□ -0.93
SMPD1-206ENST00000531336 TMEM101Q96IK0 257 aa9.24□□□□□ -0.93
SMPD1-206ENST00000531336 NXT2Q9NPJ8 142 aaKnown RBP9.24□□□□□ -0.93
SMPD1-206ENST00000531336 IGKV3OR2-268A0A0C4DH90 116 aa9.23□□□□□ -0.93
SMPD1-206ENST00000531336 SCO1O75880 301 aa9.23□□□□□ -0.93
SMPD1-206ENST00000531336 IFI27P40305 119 aaPredicted RBP9.23□□□□□ -0.93
SMPD1-206ENST00000531336 RPL39P62891 51 aaKnown RBP9.23□□□□□ -0.93
SMPD1-206ENST00000531336 REG3AQ06141 175 aa9.23□□□□□ -0.93
SMPD1-206ENST00000531336 MRPL52Q86TS9 123 aaKnown RBP9.23□□□□□ -0.93
SMPD1-206ENST00000531336 OR5A1Q8NGJ0 315 aa9.23□□□□□ -0.93
SMPD1-206ENST00000531336 C1orf43Q9BWL3 253 aa9.23□□□□□ -0.93
SMPD1-206ENST00000531336 TM2D2Q9BX73 214 aa9.23□□□□□ -0.93
SMPD1-206ENST00000531336 PRR34Q9NV39 138 aa9.23□□□□□ -0.93
SMPD1-206ENST00000531336 SMAGPQ0VAQ4 97 aa9.22□□□□□ -0.93
SMPD1-206ENST00000531336 MIAQ16674 131 aa9.22□□□□□ -0.93
SMPD1-206ENST00000531336 UBE2D4Q9Y2X8 147 aa9.22□□□□□ -0.93
SMPD1-206ENST00000531336 IGLV10-54A0A075B6I4 117 aa9.21□□□□□ -0.94
SMPD1-206ENST00000531336 A0A1B0GVY2 172 aa9.21□□□□□ -0.94
SMPD1-206ENST00000531336 DGAT2L7PQ6IED9 249 aa9.21□□□□□ -0.94
SMPD1-206ENST00000531336 PRSS3P2Q8NHM4 247 aa9.21□□□□□ -0.94
SMPD1-206ENST00000531336 COX11Q9Y6N1 276 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms