RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 APLNQ9ULZ1 77 aa13.16□□□□□ -0.3
SMPD1-205ENST00000531303 LINC00614P0C842 121 aa13.16□□□□□ -0.3
SMPD1-205ENST00000531303 ESRGQ1W209 222 aa13.16□□□□□ -0.3
SMPD1-205ENST00000531303 TMA7Q9Y2S6 64 aaKnown RBP13.16□□□□□ -0.3
SMPD1-205ENST00000531303 SERF1AO75920 110 aa13.15□□□□□ -0.3
SMPD1-205ENST00000531303 AMTP48728 403 aa13.15□□□□□ -0.3
SMPD1-205ENST00000531303 LAGE3Q14657 143 aa13.14□□□□□ -0.31
SMPD1-205ENST00000531303 TRBV6-8A0A0A6YYG3 113 aa13.13□□□□□ -0.31
SMPD1-205ENST00000531303 AP5S1Q9NUS5 200 aa13.13□□□□□ -0.31
SMPD1-205ENST00000531303 IGHV1-24A0A0C4DH33 117 aa13.12□□□□□ -0.31
SMPD1-205ENST00000531303 NUPR1O60356 82 aa13.12□□□□□ -0.31
SMPD1-205ENST00000531303 PMCHL1Q16048 86 aa13.12□□□□□ -0.31
SMPD1-205ENST00000531303 CSMD3Q7Z407 3707 aa13.12□□□□□ -0.31
SMPD1-205ENST00000531303 DYNC2H1Q8NCM8 4307 aaKnown RBP13.12□□□□□ -0.31
SMPD1-205ENST00000531303 TRBV25-1A0A075B6N4 114 aa13.11□□□□□ -0.31
SMPD1-205ENST00000531303 LINC00310P59036 64 aa13.11□□□□□ -0.31
SMPD1-205ENST00000531303 TMEM97Q5BJF2 176 aa13.11□□□□□ -0.31
SMPD1-205ENST00000531303 CHCHD7Q9BUK0 85 aa13.11□□□□□ -0.31
SMPD1-205ENST00000531303 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.1□□□□□ -0.31
SMPD1-205ENST00000531303 IGKV2-29A2NJV5 120 aaPredicted RBP13.1□□□□□ -0.31
SMPD1-205ENST00000531303 ORMDL2Q53FV1 153 aa13.1□□□□□ -0.31
SMPD1-205ENST00000531303 LELP1Q5T871 98 aa13.1□□□□□ -0.31
SMPD1-205ENST00000531303 CHCHD1Q96BP2 118 aaKnown RBP13.1□□□□□ -0.31
SMPD1-205ENST00000531303 CHCHD5Q9BSY4 110 aa13.1□□□□□ -0.31
SMPD1-205ENST00000531303 TMEM243Q9BU79 118 aa13.1□□□□□ -0.31
SMPD1-205ENST00000531303 STARD9Q9P2P6 4700 aa13.1□□□□□ -0.31
SMPD1-205ENST00000531303 TENM2Q9NT68 2774 aa13.1□□□□□ -0.31
SMPD1-205ENST00000531303 HSBP1O75506 76 aa13.1□□□□□ -0.31
SMPD1-205ENST00000531303 BTF3P20290 206 aaKnown RBP13.1□□□□□ -0.31
SMPD1-205ENST00000531303 CCL18P55774 89 aa13.1□□□□□ -0.31
SMPD1-205ENST00000531303 CASC10Q5T4H9 136 aa13.1□□□□□ -0.31
SMPD1-205ENST00000531303 LINC01546A6NGU7 62 aa13.09□□□□□ -0.31
SMPD1-205ENST00000531303 C3orf84H3BNL1 204 aa13.09□□□□□ -0.31
SMPD1-205ENST00000531303 S100A6P06703 90 aa13.09□□□□□ -0.31
SMPD1-205ENST00000531303 TCTAP57738 103 aa13.09□□□□□ -0.31
SMPD1-205ENST00000531303 GAGE6Q13070 117 aa13.09□□□□□ -0.31
SMPD1-205ENST00000531303 FAM19A2Q8N3H0 131 aa13.09□□□□□ -0.31
SMPD1-205ENST00000531303 LINC00588Q9Y4M8 146 aa13.09□□□□□ -0.31
SMPD1-205ENST00000531303 K7EMI3 77 aa13.08□□□□□ -0.32
SMPD1-205ENST00000531303 ESDP10768 282 aa13.08□□□□□ -0.32
SMPD1-205ENST00000531303 TIRAPP58753 221 aa13.08□□□□□ -0.32
SMPD1-205ENST00000531303 RPL39P62891 51 aaKnown RBP13.08□□□□□ -0.32
SMPD1-205ENST00000531303 TRAV8-6A0A0B4J262 113 aa13.07□□□□□ -0.32
SMPD1-205ENST00000531303 TMEM262E9PQX1 116 aa13.07□□□□□ -0.32
SMPD1-205ENST00000531303 UBE2L6O14933 153 aa13.07□□□□□ -0.32
SMPD1-205ENST00000531303 UBE2DNLQ8IWF7 75 aa13.07□□□□□ -0.32
SMPD1-205ENST00000531303 C20orf203Q8NBC4 194 aa13.07□□□□□ -0.32
SMPD1-205ENST00000531303 PLECQ15149 4684 aaKnown RBP13.06□□□□□ -0.32
SMPD1-205ENST00000531303 PDZD11Q5EBL8 140 aa13.06□□□□□ -0.32
SMPD1-205ENST00000531303 COA6Q5JTJ3 125 aaKnown RBP13.05□□□□□ -0.32
SMPD1-205ENST00000531303 C2orf66Q6UXQ4 117 aa13.05□□□□□ -0.32
SMPD1-205ENST00000531303 WFDC10BQ8IUB3 73 aa13.05□□□□□ -0.32
SMPD1-205ENST00000531303 CYSLTR1Q9Y271 337 aa13.04□□□□□ -0.32
SMPD1-205ENST00000531303 MRPS16Q9Y3D3 137 aaKnown RBP13.04□□□□□ -0.32
SMPD1-205ENST00000531303 A0A096LNJ9 63 aa13.04□□□□□ -0.32
SMPD1-205ENST00000531303 HBDP02042 147 aa13.04□□□□□ -0.32
SMPD1-205ENST00000531303 SNRPEP62304 92 aaKnown RBP13.04□□□□□ -0.32
SMPD1-205ENST00000531303 TMEM18Q96B42 140 aa13.04□□□□□ -0.32
SMPD1-205ENST00000531303 AMMECR1LQ6DCA0 310 aa13.03□□□□□ -0.32
SMPD1-205ENST00000531303 Q8N3U1 123 aa13.03□□□□□ -0.32
SMPD1-205ENST00000531303 FGF6P10767 208 aa13.02□□□□□ -0.33
SMPD1-205ENST00000531303 G0S2P27469 103 aa13.02□□□□□ -0.33
SMPD1-205ENST00000531303 TOMM6Q96B49 74 aa13.02□□□□□ -0.33
SMPD1-205ENST00000531303 IGHV3-30P01768 117 aa13.01□□□□□ -0.33
SMPD1-205ENST00000531303 IGHV3-33P01772 117 aa13.01□□□□□ -0.33
SMPD1-205ENST00000531303 IGHV3-30-3P0DP02 117 aa13.01□□□□□ -0.33
SMPD1-205ENST00000531303 IGHV3-30-5P0DP03 117 aa13.01□□□□□ -0.33
SMPD1-205ENST00000531303 A0A087WX48 190 aa13□□□□□ -0.33
SMPD1-205ENST00000531303 FABP4P15090 132 aa13□□□□□ -0.33
SMPD1-205ENST00000531303 MPV17L2Q567V2 206 aa13□□□□□ -0.33
SMPD1-205ENST00000531303 DGAT2L7PQ6IED9 249 aa13□□□□□ -0.33
SMPD1-205ENST00000531303 Q8N976 141 aa13□□□□□ -0.33
SMPD1-205ENST00000531303 SCGB3A1Q96QR1 104 aa13□□□□□ -0.33
SMPD1-205ENST00000531303 UBE2D4Q9Y2X8 147 aa13□□□□□ -0.33
SMPD1-205ENST00000531303 H7C423 109 aa12.99□□□□□ -0.33
SMPD1-205ENST00000531303 OPRPNQ99935 248 aaPredicted RBP12.99□□□□□ -0.33
SMPD1-205ENST00000531303 SIVA1O15304 175 aa12.98□□□□□ -0.33
SMPD1-205ENST00000531303 RBX1P62877 108 aa12.98□□□□□ -0.33
SMPD1-205ENST00000531303 HIST3H2BBQ8N257 126 aa12.98□□□□□ -0.33
SMPD1-205ENST00000531303 TMEM101Q96IK0 257 aa12.98□□□□□ -0.33
SMPD1-205ENST00000531303 IGLV4-60A0A075B6I1 120 aa12.97□□□□□ -0.33
SMPD1-205ENST00000531303 RNASE13Q5GAN3 156 aaKnown RBP12.97□□□□□ -0.33
SMPD1-205ENST00000531303 LINC00173Q6ZV60 143 aa12.97□□□□□ -0.33
SMPD1-205ENST00000531303 OR5A1Q8NGJ0 315 aa12.97□□□□□ -0.33
SMPD1-205ENST00000531303 Q9H8V8 135 aa12.97□□□□□ -0.33
SMPD1-205ENST00000531303 C5orf52A6NGY3 159 aa12.97□□□□□ -0.33
SMPD1-205ENST00000531303 LEPROTL1O95214 131 aa12.97□□□□□ -0.33
SMPD1-205ENST00000531303 S100A2P29034 98 aa12.97□□□□□ -0.33
SMPD1-205ENST00000531303 UPK3BQ9BT76 320 aa12.97□□□□□ -0.33
SMPD1-205ENST00000531303 SPANXA1Q9NS26 97 aa12.97□□□□□ -0.33
SMPD1-205ENST00000531303 IGIPA6NJ69 53 aa12.96□□□□□ -0.34
SMPD1-205ENST00000531303 PKIAP61925 76 aa12.96□□□□□ -0.34
SMPD1-205ENST00000531303 SMAGPQ0VAQ4 97 aa12.96□□□□□ -0.34
SMPD1-205ENST00000531303 ERASQ7Z444 233 aa12.96□□□□□ -0.34
SMPD1-205ENST00000531303 MRPL52Q86TS9 123 aaKnown RBP12.96□□□□□ -0.34
SMPD1-205ENST00000531303 TIMM21Q9BVV7 248 aa12.96□□□□□ -0.34
SMPD1-205ENST00000531303 LY6G6CO95867 125 aa12.95□□□□□ -0.34
SMPD1-205ENST00000531303 ANGP03950 147 aaKnown RBP12.95□□□□□ -0.34
SMPD1-205ENST00000531303 Q6ZUT4 128 aa12.95□□□□□ -0.34
SMPD1-205ENST00000531303 ZNF25P17030 456 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms