RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 IGLV1-47P01700 117 aa11.01□□□□□ -0.65
LRRK1-207ENST00000531270 SNURFQ9Y675 71 aa11.01□□□□□ -0.65
LRRK1-207ENST00000531270 SYCNQ0VAF6 134 aa11.01□□□□□ -0.65
LRRK1-207ENST00000531270 COA6Q5JTJ3 125 aaKnown RBP11.01□□□□□ -0.65
LRRK1-207ENST00000531270 CHD3Q12873 2000 aaKnown RBP11.01□□□□□ -0.65
LRRK1-207ENST00000531270 NDUFC2-KCTD14E9PQ53 114 aa11.01□□□□□ -0.65
LRRK1-207ENST00000531270 A6NED7 52 aa11.01□□□□□ -0.65
LRRK1-207ENST00000531270 UBE2D2P62837 147 aa11.01□□□□□ -0.65
LRRK1-207ENST00000531270 ZFAND3Q9H8U3 227 aa11□□□□□ -0.65
LRRK1-207ENST00000531270 SBF1O95248 1867 aa11□□□□□ -0.65
LRRK1-207ENST00000531270 PCNX2A6NKB5 2137 aa11□□□□□ -0.65
LRRK1-207ENST00000531270 NEXN-AS1Q8NBZ9 246 aa11□□□□□ -0.65
LRRK1-207ENST00000531270 PLA2G2EQ9NZK7 142 aa11□□□□□ -0.65
LRRK1-207ENST00000531270 FRMPD3Q5JV73 1810 aa11□□□□□ -0.65
LRRK1-207ENST00000531270 MYLKQ15746 1914 aa11□□□□□ -0.65
LRRK1-207ENST00000531270 Q8N976 141 aa11□□□□□ -0.65
LRRK1-207ENST00000531270 NCKAP5O14513 1909 aa10.99□□□□□ -0.65
LRRK1-207ENST00000531270 V9GYY9 64 aa10.99□□□□□ -0.65
LRRK1-207ENST00000531270 IGF1P05019 195 aa10.99□□□□□ -0.65
LRRK1-207ENST00000531270 C6orf99Q4VX62 202 aa10.99□□□□□ -0.65
LRRK1-207ENST00000531270 MT-ATP8P03928 68 aa10.99□□□□□ -0.65
LRRK1-207ENST00000531270 PROK1P58294 105 aa10.99□□□□□ -0.65
LRRK1-207ENST00000531270 DEFB114Q30KQ6 69 aa10.99□□□□□ -0.65
LRRK1-207ENST00000531270 C19orf84I3L1E1 186 aa10.99□□□□□ -0.65
LRRK1-207ENST00000531270 C20orf173Q96LM9 149 aa10.98□□□□□ -0.65
LRRK1-207ENST00000531270 Q8N9L7 120 aa10.98□□□□□ -0.65
LRRK1-207ENST00000531270 BBC3Q96PG8 261 aaPredicted RBP10.98□□□□□ -0.65
LRRK1-207ENST00000531270 SMIM9A6NGZ8 99 aa10.98□□□□□ -0.65
LRRK1-207ENST00000531270 KRTAP27-1Q3LI81 207 aa10.98□□□□□ -0.65
LRRK1-207ENST00000531270 LTBP1Q14766 1721 aa10.97□□□□□ -0.65
LRRK1-207ENST00000531270 Q6YL49 198 aa10.97□□□□□ -0.65
LRRK1-207ENST00000531270 TNFRSF13BO14836 293 aaPredicted RBP10.97□□□□□ -0.65
LRRK1-207ENST00000531270 WISP2O76076 250 aa10.97□□□□□ -0.65
LRRK1-207ENST00000531270 SPANXB1Q9NS25 103 aaPredicted RBP10.97□□□□□ -0.65
LRRK1-207ENST00000531270 ZNF706Q9Y5V0 76 aaPredicted RBP10.96□□□□□ -0.65
LRRK1-207ENST00000531270 FAM30AQ9NZY2 134 aa10.96□□□□□ -0.65
LRRK1-207ENST00000531270 TRBV6-8A0A0A6YYG3 113 aa10.96□□□□□ -0.65
LRRK1-207ENST00000531270 TRAV10A0A0B4J240 114 aa10.96□□□□□ -0.65
LRRK1-207ENST00000531270 SPATA12Q7Z6I5 190 aa10.96□□□□□ -0.65
LRRK1-207ENST00000531270 X6R8D5 127 aa10.96□□□□□ -0.65
LRRK1-207ENST00000531270 MALRD1Q5VYJ5 2156 aa10.96□□□□□ -0.66
LRRK1-207ENST00000531270 C19orf71A6NCJ1 209 aa10.96□□□□□ -0.66
LRRK1-207ENST00000531270 LINC00308Q8TCZ7 52 aa10.96□□□□□ -0.66
LRRK1-207ENST00000531270 PLA2G5P39877 138 aa10.95□□□□□ -0.66
LRRK1-207ENST00000531270 SHISA2Q6UWI4 295 aa10.95□□□□□ -0.66
LRRK1-207ENST00000531270 Q6ZVQ6 151 aa10.95□□□□□ -0.66
LRRK1-207ENST00000531270 RETNLBQ9BQ08 111 aa10.95□□□□□ -0.66
LRRK1-207ENST00000531270 PLXND1Q9Y4D7 1925 aa10.95□□□□□ -0.66
LRRK1-207ENST00000531270 PLAC8L1A1L4L8 177 aa10.95□□□□□ -0.66
LRRK1-207ENST00000531270 LINC00322Q6ZN03 302 aaPredicted RBP10.95□□□□□ -0.66
LRRK1-207ENST00000531270 SRCAPQ6ZRS2 3230 aa10.95□□□□□ -0.66
LRRK1-207ENST00000531270 TMEM223A0PJW6 202 aa10.95□□□□□ -0.66
LRRK1-207ENST00000531270 IGLV2-14P01704 120 aa10.95□□□□□ -0.66
LRRK1-207ENST00000531270 CFAP126Q5VTH2 177 aa10.95□□□□□ -0.66
LRRK1-207ENST00000531270 A8MZ25 164 aa10.94□□□□□ -0.66
LRRK1-207ENST00000531270 HELZP42694 1942 aaKnown RBP10.94□□□□□ -0.66
LRRK1-207ENST00000531270 C10orf99Q6UWK7 81 aa10.94□□□□□ -0.66
LRRK1-207ENST00000531270 THSD7BQ9C0I4 1608 aa10.94□□□□□ -0.66
LRRK1-207ENST00000531270 IGLV4-3A0A075B6K6 122 aa10.94□□□□□ -0.66
LRRK1-207ENST00000531270 IBA57-AS1B1ANH7 110 aa10.94□□□□□ -0.66
LRRK1-207ENST00000531270 ZGRF1Q86YA3 2104 aa10.93□□□□□ -0.66
LRRK1-207ENST00000531270 MIFP14174 115 aa10.93□□□□□ -0.66
LRRK1-207ENST00000531270 MSMPQ1L6U9 139 aa10.93□□□□□ -0.66
LRRK1-207ENST00000531270 H7C423 109 aa10.93□□□□□ -0.66
LRRK1-207ENST00000531270 UQCRQO14949 82 aa10.93□□□□□ -0.66
LRRK1-207ENST00000531270 POM121L12Q8N7R1 296 aa10.93□□□□□ -0.66
LRRK1-207ENST00000531270 ZNF22P17026 224 aaPredicted RBP10.93□□□□□ -0.66
LRRK1-207ENST00000531270 TSC2P49815 1807 aa10.93□□□□□ -0.66
LRRK1-207ENST00000531270 VWA8A3KMH1 1905 aa10.93□□□□□ -0.66
LRRK1-207ENST00000531270 C22orf34Q6ZV56 151 aa10.93□□□□□ -0.66
LRRK1-207ENST00000531270 TNCP24821 2201 aa10.92□□□□□ -0.66
LRRK1-207ENST00000531270 TRIAP1O43715 76 aa10.92□□□□□ -0.66
LRRK1-207ENST00000531270 GDF5OSQ5U4N7 250 aa10.92□□□□□ -0.66
LRRK1-207ENST00000531270 CLUHP3Q96NS8 147 aa10.92□□□□□ -0.66
LRRK1-207ENST00000531270 K7EQG2 157 aa10.92□□□□□ -0.66
LRRK1-207ENST00000531270 SERP2Q8N6R1 65 aa10.92□□□□□ -0.66
LRRK1-207ENST00000531270 TRBV6-5A0A0K0K1A5 114 aa10.92□□□□□ -0.66
LRRK1-207ENST00000531270 LOC100131303A0A0U1RQF7 123 aa10.92□□□□□ -0.66
LRRK1-207ENST00000531270 RIF1Q5UIP0 2472 aaKnown RBP10.91□□□□□ -0.66
LRRK1-207ENST00000531270 LMO4P61968 165 aa10.91□□□□□ -0.66
LRRK1-207ENST00000531270 Q6ZQY7 126 aa10.91□□□□□ -0.66
LRRK1-207ENST00000531270 NBASA2RRP1 2371 aa10.91□□□□□ -0.66
LRRK1-207ENST00000531270 LY6G6DO95868 133 aa10.91□□□□□ -0.66
LRRK1-207ENST00000531270 TP73-AS1Q9UF72 201 aa10.91□□□□□ -0.66
LRRK1-207ENST00000531270 FNDC1Q4ZHG4 1894 aaPredicted RBP10.91□□□□□ -0.66
LRRK1-207ENST00000531270 KPRPQ5T749 579 aaPredicted RBP10.91□□□□□ -0.66
LRRK1-207ENST00000531270 IGF2-ASQ6U949 168 aa10.91□□□□□ -0.66
LRRK1-207ENST00000531270 WFDC10AQ9H1F0 79 aa10.91□□□□□ -0.66
LRRK1-207ENST00000531270 TRBV27A0A0K0K1C4 114 aa10.9□□□□□ -0.66
LRRK1-207ENST00000531270 RLFQ13129 1914 aa10.9□□□□□ -0.66
LRRK1-207ENST00000531270 Q6ZSV7 163 aa10.9□□□□□ -0.66
LRRK1-207ENST00000531270 ATP5EP2Q5VTU8 51 aa10.9□□□□□ -0.67
LRRK1-207ENST00000531270 FAM19A3Q7Z5A8 133 aa10.89□□□□□ -0.67
LRRK1-207ENST00000531270 PLXNA3P51805 1871 aa10.89□□□□□ -0.67
LRRK1-207ENST00000531270 Q8NA96 180 aa10.89□□□□□ -0.67
LRRK1-207ENST00000531270 LRRC75A-AS1Q8N1F1 130 aa10.89□□□□□ -0.67
LRRK1-207ENST00000531270 ODF3Q96PU9 254 aa10.89□□□□□ -0.67
LRRK1-207ENST00000531270 ODF3BA8MYP8 253 aa10.89□□□□□ -0.67
LRRK1-207ENST00000531270 DHRS4-AS1Q9P1J3 65 aa10.89□□□□□ -0.67
LRRK1-207ENST00000531270 A0A1W2PNU3 283 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 230.1 ms