RNA–Protein interactions for RNA: ENST00000531141.1

CD44-233, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 537 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-233ENST00000531141 OR2T1O43869 369 aa1.08□□□□□ -2.24
CD44-233ENST00000531141 NCR2O95944 276 aa1.08□□□□□ -2.24
CD44-233ENST00000531141 NAPSAO96009 420 aa1.08□□□□□ -2.24
CD44-233ENST00000531141 IGF2P01344 180 aa1.08□□□□□ -2.24
CD44-233ENST00000531141 METTL15P1P0C7V9 234 aa1.08□□□□□ -2.24
CD44-233ENST00000531141 RPL28P46779 137 aaKnown RBP1.08□□□□□ -2.24
CD44-233ENST00000531141 EVX1P49640 407 aa1.08□□□□□ -2.24
CD44-233ENST00000531141 RAB5CP51148 216 aa1.08□□□□□ -2.24
CD44-233ENST00000531141 INSL3P51460 131 aa1.08□□□□□ -2.24
CD44-233ENST00000531141 DYNLT3P51808 116 aa1.08□□□□□ -2.24
CD44-233ENST00000531141 TMBIM6P55061 237 aa1.08□□□□□ -2.24
CD44-233ENST00000531141 DSCR4P56555 118 aaPredicted RBP1.08□□□□□ -2.24
CD44-233ENST00000531141 HBBP68871 147 aa1.08□□□□□ -2.24
CD44-233ENST00000531141 ERHP84090 104 aaKnown RBP1.08□□□□□ -2.24
CD44-233ENST00000531141 CCSMST1Q4G0I0 132 aa1.08□□□□□ -2.24
CD44-233ENST00000531141 EIF5AL1Q6IS14 154 aaKnown RBP1.08□□□□□ -2.24
CD44-233ENST00000531141 DPPA3Q6W0C5 159 aa1.08□□□□□ -2.24
CD44-233ENST00000531141 COA5Q86WW8 74 aa1.08□□□□□ -2.24
CD44-233ENST00000531141 LRRC18Q8N456 261 aa1.08□□□□□ -2.24
CD44-233ENST00000531141 PACRGLQ8N7B6 248 aa1.08□□□□□ -2.24
CD44-233ENST00000531141 OR5D16Q8NGK9 328 aa1.08□□□□□ -2.24
CD44-233ENST00000531141 OR2T10Q8NGZ9 312 aa1.08□□□□□ -2.24
CD44-233ENST00000531141 OR4K15Q8NH41 348 aa1.08□□□□□ -2.24
CD44-233ENST00000531141 VPS25Q9BRG1 176 aa1.08□□□□□ -2.24
CD44-233ENST00000531141 GINS4Q9BRT9 223 aa1.08□□□□□ -2.24
CD44-233ENST00000531141 C2orf88Q9BSF0 95 aa1.08□□□□□ -2.24
CD44-233ENST00000531141 ADAT1Q9BUB4 502 aaKnown RBP1.08□□□□□ -2.24
CD44-233ENST00000531141 MRPL32Q9BYC8 188 aaKnown RBP1.08□□□□□ -2.24
CD44-233ENST00000531141 OTORQ9NRC9 128 aa1.08□□□□□ -2.24
CD44-233ENST00000531141 NAT8BQ9UHF3 227 aa1.08□□□□□ -2.24
CD44-233ENST00000531141 TRAPPC2LQ9UL33 140 aa1.08□□□□□ -2.24
CD44-233ENST00000531141 HIGD1AQ9Y241 93 aa1.08□□□□□ -2.24
CD44-233ENST00000531141 RBM7Q9Y580 266 aaKnown RBP1.08□□□□□ -2.24
CD44-233ENST00000531141 SYNE2Q8WXH0 6885 aaKnown RBP1.07□□□□□ -2.24
CD44-233ENST00000531141 TNCP24821 2201 aa1.07□□□□□ -2.24
CD44-233ENST00000531141 IGHV3-64A0A075B6Q5 118 aa1.07□□□□□ -2.24
CD44-233ENST00000531141 IGHV1-18A0A0C4DH31 117 aa1.07□□□□□ -2.24
CD44-233ENST00000531141 LOC107984640A0A0U1RRK4 108 aa1.07□□□□□ -2.24
CD44-233ENST00000531141 LOC285095A0A1B0GVY8 99 aa1.07□□□□□ -2.24
CD44-233ENST00000531141 A8MWV9 139 aa1.07□□□□□ -2.24
CD44-233ENST00000531141 J3QR89 54 aa1.07□□□□□ -2.24
CD44-233ENST00000531141 M0R2N4 97 aa1.07□□□□□ -2.24
CD44-233ENST00000531141 M0R2Z0 102 aa1.07□□□□□ -2.24
CD44-233ENST00000531141 SDCBPO00560 298 aaPredicted RBP1.07□□□□□ -2.24
CD44-233ENST00000531141 NDUFB3O43676 98 aa1.07□□□□□ -2.24
CD44-233ENST00000531141 HTR1AP08908 422 aa1.07□□□□□ -2.24
CD44-233ENST00000531141 TSPAN19P0C672 248 aa1.07□□□□□ -2.24
CD44-233ENST00000531141 RPL22P35268 128 aaKnown RBP1.07□□□□□ -2.24
CD44-233ENST00000531141 DNAJB13P59910 316 aa1.07□□□□□ -2.24
CD44-233ENST00000531141 NCS1P62166 190 aa1.07□□□□□ -2.24
CD44-233ENST00000531141 LSM3P62310 102 aaKnown RBP1.07□□□□□ -2.24
CD44-233ENST00000531141 SELENOWP63302 87 aa1.07□□□□□ -2.24
CD44-233ENST00000531141 CCL8P80075 99 aa1.07□□□□□ -2.24
CD44-233ENST00000531141 SLC38A11Q08AI6 406 aa1.07□□□□□ -2.24
CD44-233ENST00000531141 KHDC3LQ587J8 217 aa1.07□□□□□ -2.24
CD44-233ENST00000531141 HRCT1Q6UXD1 115 aa1.07□□□□□ -2.24
CD44-233ENST00000531141 BPIFA4PQ86YQ2 179 aa1.07□□□□□ -2.24
CD44-233ENST00000531141 MMGT1Q8N4V1 131 aa1.07□□□□□ -2.24
CD44-233ENST00000531141 SLC30A7Q8NEW0 376 aa1.07□□□□□ -2.24
CD44-233ENST00000531141 OR5A2Q8NGI9 324 aa1.07□□□□□ -2.24
CD44-233ENST00000531141 OR51A4Q8NGJ6 313 aa1.07□□□□□ -2.24
CD44-233ENST00000531141 STAG3L4Q8TBR4 150 aa1.07□□□□□ -2.24
CD44-233ENST00000531141 TMEM203Q969S6 136 aa1.07□□□□□ -2.24
CD44-233ENST00000531141 CARD19Q96LW7 228 aa1.07□□□□□ -2.24
CD44-233ENST00000531141 IMMP2LQ96T52 175 aa1.07□□□□□ -2.24
CD44-233ENST00000531141 PRADC1Q9BSG0 188 aa1.07□□□□□ -2.24
CD44-233ENST00000531141 NPCDR1Q9BY65 106 aa1.07□□□□□ -2.24
CD44-233ENST00000531141 NAT8Q9UHE5 227 aa1.07□□□□□ -2.24
CD44-233ENST00000531141 HHLA3Q9XRX5 114 aa1.07□□□□□ -2.24
CD44-233ENST00000531141 U3KQ87 197 aa1.07□□□□□ -2.24
CD44-233ENST00000531141 TRAV13-1A0A0B4J241 112 aa1.06□□□□□ -2.24
CD44-233ENST00000531141 TRBV27A0A0K0K1C4 114 aa1.06□□□□□ -2.24
CD44-233ENST00000531141 A0A1B0GVG6 124 aa1.06□□□□□ -2.24
CD44-233ENST00000531141 ZNF705FA8MVS1 300 aaPredicted RBP1.06□□□□□ -2.24
CD44-233ENST00000531141 FAM25AB3EWG3 89 aa1.06□□□□□ -2.24
CD44-233ENST00000531141 FAM25CB3EWG5 89 aa1.06□□□□□ -2.24
CD44-233ENST00000531141 FAM25GB3EWG6 89 aa1.06□□□□□ -2.24
CD44-233ENST00000531141 H3BT86 120 aa1.06□□□□□ -2.24
CD44-233ENST00000531141 H3BUX3 64 aa1.06□□□□□ -2.24
CD44-233ENST00000531141 K7ERU9 68 aa1.06□□□□□ -2.24
CD44-233ENST00000531141 DLEU1O43261 78 aa1.06□□□□□ -2.24
CD44-233ENST00000531141 SMR3BP02814 79 aaPredicted RBP1.06□□□□□ -2.24
CD44-233ENST00000531141 FABP2P12104 132 aa1.06□□□□□ -2.24
CD44-233ENST00000531141 SUPT4H1P63272 117 aaKnown RBP1.06□□□□□ -2.24
CD44-233ENST00000531141 RHOGP84095 191 aa1.06□□□□□ -2.24
CD44-233ENST00000531141 HIST1H1AQ02539 215 aaPredicted RBP1.06□□□□□ -2.24
CD44-233ENST00000531141 KISS1Q15726 138 aa1.06□□□□□ -2.24
CD44-233ENST00000531141 TMEM155Q4W5P6 130 aa1.06□□□□□ -2.24
CD44-233ENST00000531141 Q5XG85 94 aa1.06□□□□□ -2.24
CD44-233ENST00000531141 TMEM14EPQ6UXP3 125 aa1.06□□□□□ -2.24
CD44-233ENST00000531141 LINC00305Q7Z4B0 112 aa1.06□□□□□ -2.24
CD44-233ENST00000531141 SLC35E3Q7Z769 313 aa1.06□□□□□ -2.24
CD44-233ENST00000531141 Q8N2B8 174 aa1.06□□□□□ -2.24
CD44-233ENST00000531141 OR4B1Q8NGF8 309 aa1.06□□□□□ -2.24
CD44-233ENST00000531141 SPACA4Q8TDM5 124 aa1.06□□□□□ -2.24
CD44-233ENST00000531141 AP1S3Q96PC3 154 aa1.06□□□□□ -2.24
CD44-233ENST00000531141 CACYBPQ9HB71 228 aaKnown RBP1.06□□□□□ -2.24
CD44-233ENST00000531141 OR5AC2Q9NZP5 309 aa1.06□□□□□ -2.24
CD44-233ENST00000531141 ERG28Q9UKR5 140 aa1.06□□□□□ -2.24
CD44-233ENST00000531141 BAIAP2Q9UQB8 552 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms