RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 RNASE3P12724 160 aaKnown RBP5.7□□□□□ -1.5
PTPRK-219ENST00000531050 IGFL2Q6UWQ7 119 aa5.7□□□□□ -1.5
PTPRK-219ENST00000531050 WFDC9Q8NEX5 89 aa5.7□□□□□ -1.5
PTPRK-219ENST00000531050 LINC00308Q8TCZ7 52 aa5.7□□□□□ -1.5
PTPRK-219ENST00000531050 FAM104AQ969W3 186 aa5.7□□□□□ -1.5
PTPRK-219ENST00000531050 ARHGAP32A7KAX9 2087 aa5.69□□□□□ -1.5
PTPRK-219ENST00000531050 IGHV3-35A0A0C4DH35 117 aa5.69□□□□□ -1.5
PTPRK-219ENST00000531050 TRBV6-5A0A0K0K1A5 114 aa5.69□□□□□ -1.5
PTPRK-219ENST00000531050 PRB3Q04118 309 aaPredicted RBP5.69□□□□□ -1.5
PTPRK-219ENST00000531050 ZFAND2AQ8N6M9 145 aa5.69□□□□□ -1.5
PTPRK-219ENST00000531050 IGHV3-66A0A0C4DH42 116 aa5.69□□□□□ -1.5
PTPRK-219ENST00000531050 GNRH2O43555 120 aa5.69□□□□□ -1.5
PTPRK-219ENST00000531050 IGHV1-8P0DP01 117 aa5.69□□□□□ -1.5
PTPRK-219ENST00000531050 RNASE4P34096 147 aaKnown RBP5.69□□□□□ -1.5
PTPRK-219ENST00000531050 C20orf203Q8NBC4 194 aa5.69□□□□□ -1.5
PTPRK-219ENST00000531050 MRPL53Q96EL3 112 aaKnown RBP5.69□□□□□ -1.5
PTPRK-219ENST00000531050 CACNA1GO43497 2377 aa5.68□□□□□ -1.5
PTPRK-219ENST00000531050 KALRNO60229 2985 aa5.68□□□□□ -1.5
PTPRK-219ENST00000531050 IGLV3-9A0A075B6K5 115 aa5.68□□□□□ -1.5
PTPRK-219ENST00000531050 DCHS1Q96JQ0 3298 aa5.68□□□□□ -1.5
PTPRK-219ENST00000531050 HOXD3P31249 432 aaPredicted RBP5.68□□□□□ -1.5
PTPRK-219ENST00000531050 KLKP1Q107X0 134 aa5.68□□□□□ -1.5
PTPRK-219ENST00000531050 PMAIP1Q13794 54 aa5.68□□□□□ -1.5
PTPRK-219ENST00000531050 SOSTDC1Q6X4U4 206 aa5.68□□□□□ -1.5
PTPRK-219ENST00000531050 A0A087WWL8 130 aa5.67□□□□□ -1.5
PTPRK-219ENST00000531050 TRAV21A0A0B4J279 112 aa5.67□□□□□ -1.5
PTPRK-219ENST00000531050 RPL11P62913 178 aaKnown RBP5.67□□□□□ -1.5
PTPRK-219ENST00000531050 DEFB124Q8NES8 71 aa5.67□□□□□ -1.5
PTPRK-219ENST00000531050 BPESC1Q9GZL8 116 aa5.67□□□□□ -1.5
PTPRK-219ENST00000531050 IGLV1-47P01700 117 aa5.67□□□□□ -1.5
PTPRK-219ENST00000531050 LYPD2Q6UXB3 125 aa5.67□□□□□ -1.5
PTPRK-219ENST00000531050 IGHV3OR16-13A0A075B7E8 117 aa5.66□□□□□ -1.5
PTPRK-219ENST00000531050 IGHV3-74A0A0B4J1X5 117 aa5.66□□□□□ -1.5
PTPRK-219ENST00000531050 F5H697 171 aa5.66□□□□□ -1.5
PTPRK-219ENST00000531050 RBM3P98179 157 aaKnown RBP5.66□□□□□ -1.5
PTPRK-219ENST00000531050 SEM1Q6ZVN7 128 aa5.66□□□□□ -1.5
PTPRK-219ENST00000531050 COPS9Q8WXC6 57 aa5.66□□□□□ -1.5
PTPRK-219ENST00000531050 RMI2Q96E14 147 aa5.66□□□□□ -1.5
PTPRK-219ENST00000531050 LENEPQ9Y5L5 61 aa5.66□□□□□ -1.5
PTPRK-219ENST00000531050 MUC4Q99102 2169 aa5.66□□□□□ -1.5
PTPRK-219ENST00000531050 TRAV7A0A075B6U4 112 aa5.66□□□□□ -1.5
PTPRK-219ENST00000531050 F8WEM9 126 aa5.66□□□□□ -1.5
PTPRK-219ENST00000531050 NDUFA1O15239 70 aa5.66□□□□□ -1.5
PTPRK-219ENST00000531050 ZNF625Q96I27 306 aaPredicted RBP5.66□□□□□ -1.5
PTPRK-219ENST00000531050 SPENQ96T58 3664 aaKnown RBP5.65□□□□□ -1.5
PTPRK-219ENST00000531050 CFHR3Q02985 330 aa5.65□□□□□ -1.5
PTPRK-219ENST00000531050 DEFB109BQ30KR1 87 aa5.65□□□□□ -1.5
PTPRK-219ENST00000531050 FAM229BQ4G0N7 80 aa5.65□□□□□ -1.5
PTPRK-219ENST00000531050 ATP5EP2Q5VTU8 51 aa5.65□□□□□ -1.5
PTPRK-219ENST00000531050 ENHOQ6UWT2 76 aa5.65□□□□□ -1.5
PTPRK-219ENST00000531050 RNF5Q99942 180 aa5.65□□□□□ -1.5
PTPRK-219ENST00000531050 RETNQ9HD89 108 aa5.65□□□□□ -1.5
PTPRK-219ENST00000531050 SNURFQ9Y675 71 aa5.65□□□□□ -1.5
PTPRK-219ENST00000531050 URB1O60287 2271 aaKnown RBP5.65□□□□□ -1.51
PTPRK-219ENST00000531050 PRRC2CQ9Y520 2896 aaKnown RBP5.65□□□□□ -1.51
PTPRK-219ENST00000531050 A0A087WYN8 130 aa5.65□□□□□ -1.51
PTPRK-219ENST00000531050 M0R1B8 84 aa5.65□□□□□ -1.51
PTPRK-219ENST00000531050 NCR3O14931 201 aa5.65□□□□□ -1.51
PTPRK-219ENST00000531050 NDUFB3O43676 98 aa5.65□□□□□ -1.51
PTPRK-219ENST00000531050 C1orf158Q8N1D5 194 aa5.65□□□□□ -1.51
PTPRK-219ENST00000531050 LY6G5BQ8NDX9 201 aa5.65□□□□□ -1.51
PTPRK-219ENST00000531050 Q96MF0 132 aa5.65□□□□□ -1.51
PTPRK-219ENST00000531050 ICE1Q9Y2F5 2266 aa5.64□□□□□ -1.51
PTPRK-219ENST00000531050 SMG1Q96Q15 3661 aaKnown RBP5.64□□□□□ -1.51
PTPRK-219ENST00000531050 M0QY20 66 aa5.64□□□□□ -1.51
PTPRK-219ENST00000531050 CD28P10747 220 aa5.64□□□□□ -1.51
PTPRK-219ENST00000531050 RNASE13Q5GAN3 156 aaKnown RBP5.64□□□□□ -1.51
PTPRK-219ENST00000531050 APRG1Q8IVJ8 170 aa5.64□□□□□ -1.51
PTPRK-219ENST00000531050 ITLN2Q8WWU7 325 aaPredicted RBP5.64□□□□□ -1.51
PTPRK-219ENST00000531050 IGHV3-49A0A0A0MS15 119 aa5.64□□□□□ -1.51
PTPRK-219ENST00000531050 SOCS3O14543 225 aa5.63□□□□□ -1.51
PTPRK-219ENST00000531050 BCE1O60756 84 aa5.63□□□□□ -1.51
PTPRK-219ENST00000531050 DEFB1P60022 68 aa5.63□□□□□ -1.51
PTPRK-219ENST00000531050 SNRPD3P62318 126 aaKnown RBP5.63□□□□□ -1.51
PTPRK-219ENST00000531050 HIST2H2BCQ6DN03 193 aa5.63□□□□□ -1.51
PTPRK-219ENST00000531050 HIST2H2BDQ6DRA6 164 aa5.63□□□□□ -1.51
PTPRK-219ENST00000531050 MPLKIPQ8TAP9 179 aa5.63□□□□□ -1.51
PTPRK-219ENST00000531050 FAM215AQ9Y5M1 114 aa5.63□□□□□ -1.51
PTPRK-219ENST00000531050 ZFHX4Q86UP3 3567 aa5.63□□□□□ -1.51
PTPRK-219ENST00000531050 CACNA1HO95180 2353 aa5.63□□□□□ -1.51
PTPRK-219ENST00000531050 MUC6Q6W4X9 2439 aa5.63□□□□□ -1.51
PTPRK-219ENST00000531050 Q6ZRU5 148 aa5.63□□□□□ -1.51
PTPRK-219ENST00000531050 PRR15Q8IV56 129 aa5.63□□□□□ -1.51
PTPRK-219ENST00000531050 TRBV10-3A0A0K0K1G6 114 aa5.62□□□□□ -1.51
PTPRK-219ENST00000531050 C15orf32Q32M92 178 aa5.62□□□□□ -1.51
PTPRK-219ENST00000531050 S100A7L2Q5SY68 101 aa5.62□□□□□ -1.51
PTPRK-219ENST00000531050 COX7A1P24310 79 aa5.62□□□□□ -1.51
PTPRK-219ENST00000531050 CD164Q04900 197 aa5.62□□□□□ -1.51
PTPRK-219ENST00000531050 FAM74A4Q5TZK3 123 aa5.62□□□□□ -1.51
PTPRK-219ENST00000531050 FAM110DQ8TAY7 271 aaPredicted RBP5.62□□□□□ -1.51
PTPRK-219ENST00000531050 ZFHX3Q15911 3703 aa5.61□□□□□ -1.51
PTPRK-219ENST00000531050 TRAV13-2A0A0B4J235 113 aa5.61□□□□□ -1.51
PTPRK-219ENST00000531050 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.61□□□□□ -1.51
PTPRK-219ENST00000531050 TMEM89A2RUT3 159 aa5.61□□□□□ -1.51
PTPRK-219ENST00000531050 IBA57-AS1B1ANH7 110 aa5.61□□□□□ -1.51
PTPRK-219ENST00000531050 SAA4P35542 130 aa5.61□□□□□ -1.51
PTPRK-219ENST00000531050 ATP5EP56381 51 aaPredicted RBP5.61□□□□□ -1.51
PTPRK-219ENST00000531050 BLCAPP62952 87 aa5.61□□□□□ -1.51
PTPRK-219ENST00000531050 NPBQ8NG41 125 aa5.61□□□□□ -1.51
PTPRK-219ENST00000531050 OVOL2Q9BRP0 275 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms