RNA–Protein interactions for RNA: ENST00000530673.1

VPS51-208, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 633 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-208ENST00000530673 TMEM243Q9BU79 118 aa11.3□□□□□ -0.6
VPS51-208ENST00000530673 FOXA3P55318 350 aaPredicted RBP11.29□□□□□ -0.6
VPS51-208ENST00000530673 KRTAP10-4P60372 401 aaPredicted RBP11.29□□□□□ -0.6
VPS51-208ENST00000530673 CLPSL2Q6UWE3 100 aa11.29□□□□□ -0.6
VPS51-208ENST00000530673 TEX261Q6UWH6 196 aa11.29□□□□□ -0.6
VPS51-208ENST00000530673 A8MWL6 223 aa11.28□□□□□ -0.6
VPS51-208ENST00000530673 J3QL48 77 aa11.28□□□□□ -0.6
VPS51-208ENST00000530673 PRSS1P07477 247 aa11.28□□□□□ -0.6
VPS51-208ENST00000530673 REG3AQ06141 175 aa11.28□□□□□ -0.6
VPS51-208ENST00000530673 CT83Q5H943 113 aa11.28□□□□□ -0.6
VPS51-208ENST00000530673 SMIM15Q7Z3B0 74 aa11.28□□□□□ -0.6
VPS51-208ENST00000530673 C20orf203Q8NBC4 194 aa11.28□□□□□ -0.6
VPS51-208ENST00000530673 CLRN3Q8NCR9 226 aa11.28□□□□□ -0.6
VPS51-208ENST00000530673 GTSF1Q8WW33 167 aa11.28□□□□□ -0.6
VPS51-208ENST00000530673 KRTAP29-1A8MX34 341 aaPredicted RBP11.27□□□□□ -0.61
VPS51-208ENST00000530673 COTL1Q14019 142 aa11.27□□□□□ -0.61
VPS51-208ENST00000530673 GATD1Q8NB37 220 aa11.27□□□□□ -0.61
VPS51-208ENST00000530673 GATCO43716 136 aaKnown RBP11.26□□□□□ -0.61
VPS51-208ENST00000530673 C9orf163Q8N9P6 203 aa11.26□□□□□ -0.61
VPS51-208ENST00000530673 NCR2O95944 276 aa11.25□□□□□ -0.61
VPS51-208ENST00000530673 FAM210AQ96ND0 272 aa11.25□□□□□ -0.61
VPS51-208ENST00000530673 hCG_2014768A0A024R1R8 64 aa11.24□□□□□ -0.61
VPS51-208ENST00000530673 IGLV4-60A0A075B6I1 120 aa11.24□□□□□ -0.61
VPS51-208ENST00000530673 FAM231BA6NCW3 169 aa11.24□□□□□ -0.61
VPS51-208ENST00000530673 H7C423 109 aa11.24□□□□□ -0.61
VPS51-208ENST00000530673 UBE2L6O14933 153 aa11.24□□□□□ -0.61
VPS51-208ENST00000530673 AMTP48728 403 aa11.24□□□□□ -0.61
VPS51-208ENST00000530673 LRP1Q07954 4544 aaKnown RBP11.23□□□□□ -0.61
VPS51-208ENST00000530673 IGLV10-54A0A075B6I4 117 aa11.23□□□□□ -0.61
VPS51-208ENST00000530673 EIF5A2Q9GZV4 153 aaKnown RBP11.23□□□□□ -0.61
VPS51-208ENST00000530673 GFRA4Q9GZZ7 299 aa11.23□□□□□ -0.61
VPS51-208ENST00000530673 SMIM7Q9BQ49 75 aa11.22□□□□□ -0.61
VPS51-208ENST00000530673 TRBV6-5A0A0K0K1A5 114 aa11.21□□□□□ -0.61
VPS51-208ENST00000530673 CNBPP62633 177 aaKnown RBP11.21□□□□□ -0.61
VPS51-208ENST00000530673 LINC01551Q86U37 167 aa11.21□□□□□ -0.61
VPS51-208ENST00000530673 BORCS7Q96B45 105 aa11.21□□□□□ -0.61
VPS51-208ENST00000530673 OSTCQ9NRP0 149 aa11.21□□□□□ -0.61
VPS51-208ENST00000530673 FAT3Q8TDW7 4589 aa11.21□□□□□ -0.62
VPS51-208ENST00000530673 PKHD1L1Q86WI1 4243 aa11.2□□□□□ -0.62
VPS51-208ENST00000530673 TRAV26-2A0A0B4J265 109 aa11.2□□□□□ -0.62
VPS51-208ENST00000530673 SDIM1Q6ZPB5 146 aa11.2□□□□□ -0.62
VPS51-208ENST00000530673 TSKUQ8WUA8 353 aa11.2□□□□□ -0.62
VPS51-208ENST00000530673 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.2□□□□□ -0.62
VPS51-208ENST00000530673 A0A1B0GUT8 65 aa11.19□□□□□ -0.62
VPS51-208ENST00000530673 SDHAF1A6NFY7 115 aa11.19□□□□□ -0.62
VPS51-208ENST00000530673 ZNF727A8MUV8 499 aa11.19□□□□□ -0.62
VPS51-208ENST00000530673 SRP19P09132 144 aaKnown RBP11.19□□□□□ -0.62
VPS51-208ENST00000530673 CEBPGP53567 150 aa11.19□□□□□ -0.62
VPS51-208ENST00000530673 RPL39LQ96EH5 51 aaKnown RBP11.19□□□□□ -0.62
VPS51-208ENST00000530673 TMEM191AQ9H0A3 160 aa11.19□□□□□ -0.62
VPS51-208ENST00000530673 PANO1I0J062 215 aa11.18□□□□□ -0.62
VPS51-208ENST00000530673 I3L3M4 83 aa11.18□□□□□ -0.62
VPS51-208ENST00000530673 HIGD1CA8MV81 97 aa11.17□□□□□ -0.62
VPS51-208ENST00000530673 ZNF25P17030 456 aaPredicted RBP11.17□□□□□ -0.62
VPS51-208ENST00000530673 FAM74A3Q4VXF1 159 aa11.17□□□□□ -0.62
VPS51-208ENST00000530673 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.16□□□□□ -0.62
VPS51-208ENST00000530673 hDV102S1A0JD36 115 aa11.16□□□□□ -0.62
VPS51-208ENST00000530673 APCSP02743 223 aa11.16□□□□□ -0.62
VPS51-208ENST00000530673 SLPIP03973 132 aa11.16□□□□□ -0.62
VPS51-208ENST00000530673 RPL37AP61513 92 aaKnown RBP11.16□□□□□ -0.62
VPS51-208ENST00000530673 AMMECR1LQ6DCA0 310 aa11.16□□□□□ -0.62
VPS51-208ENST00000530673 CFAP161Q6P656 301 aa11.16□□□□□ -0.62
VPS51-208ENST00000530673 AP5S1Q9NUS5 200 aa11.16□□□□□ -0.62
VPS51-208ENST00000530673 OXTP01178 125 aa11.15□□□□□ -0.62
VPS51-208ENST00000530673 PMCHP20382 165 aa11.15□□□□□ -0.62
VPS51-208ENST00000530673 CIRBPQ14011 172 aaKnown RBP11.15□□□□□ -0.62
VPS51-208ENST00000530673 MRAP2Q96G30 205 aa11.15□□□□□ -0.62
VPS51-208ENST00000530673 FGF6P10767 208 aa11.14□□□□□ -0.63
VPS51-208ENST00000530673 SMDT1Q9H4I9 107 aa11.14□□□□□ -0.63
VPS51-208ENST00000530673 ST20Q9HBF5 79 aa11.14□□□□□ -0.63
VPS51-208ENST00000530673 PPP1R17O96001 155 aa11.13□□□□□ -0.63
VPS51-208ENST00000530673 ESDP10768 282 aa11.13□□□□□ -0.63
VPS51-208ENST00000530673 RAB4AP20338 218 aa11.13□□□□□ -0.63
VPS51-208ENST00000530673 POLR2KP53803 58 aaKnown RBP11.13□□□□□ -0.63
VPS51-208ENST00000530673 TMEM241Q24JQ0 296 aa11.13□□□□□ -0.63
VPS51-208ENST00000530673 RNF185Q96GF1 192 aa11.13□□□□□ -0.63
VPS51-208ENST00000530673 V9GYV3 84 aa11.13□□□□□ -0.63
VPS51-208ENST00000530673 IGHV3-64A0A075B6Q5 118 aa11.12□□□□□ -0.63
VPS51-208ENST00000530673 TRBV27A0A0K0K1C4 114 aa11.12□□□□□ -0.63
VPS51-208ENST00000530673 HNRNPA3P51991 378 aaKnown RBP11.12□□□□□ -0.63
VPS51-208ENST00000530673 RIGQ13278 110 aa11.12□□□□□ -0.63
VPS51-208ENST00000530673 RNASEKQ6P5S7 137 aaKnown RBP11.12□□□□□ -0.63
VPS51-208ENST00000530673 C15orf56Q8N910 161 aa11.12□□□□□ -0.63
VPS51-208ENST00000530673 ISOC2Q96AB3 205 aa11.12□□□□□ -0.63
VPS51-208ENST00000530673 BTF3L4Q96K17 158 aa11.12□□□□□ -0.63
VPS51-208ENST00000530673 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.11□□□□□ -0.63
VPS51-208ENST00000530673 IGKV2-29A2NJV5 120 aaPredicted RBP11.11□□□□□ -0.63
VPS51-208ENST00000530673 GAGE12HA6NDE8 117 aa11.11□□□□□ -0.63
VPS51-208ENST00000530673 NUP35Q8NFH5 326 aa11.11□□□□□ -0.63
VPS51-208ENST00000530673 OR5A1Q8NGJ0 315 aa11.11□□□□□ -0.63
VPS51-208ENST00000530673 TMEM101Q96IK0 257 aa11.11□□□□□ -0.63
VPS51-208ENST00000530673 IGKV3OR2-268A0A0C4DH90 116 aa11.1□□□□□ -0.63
VPS51-208ENST00000530673 A0A1B0GVG6 124 aa11.1□□□□□ -0.63
VPS51-208ENST00000530673 TSHBP01222 138 aa11.1□□□□□ -0.63
VPS51-208ENST00000530673 RPL23P62829 140 aaKnown RBP11.1□□□□□ -0.63
VPS51-208ENST00000530673 MRPL52Q86TS9 123 aaKnown RBP11.1□□□□□ -0.63
VPS51-208ENST00000530673 CHCHD10Q8WYQ3 142 aaPredicted RBP11.1□□□□□ -0.63
VPS51-208ENST00000530673 NAT8BQ9UHF3 227 aa11.1□□□□□ -0.63
VPS51-208ENST00000530673 GAS8-AS1O95177 125 aa11.09□□□□□ -0.63
VPS51-208ENST00000530673 NAT8Q9UHE5 227 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms