RNA–Protein interactions for RNA: ENST00000530628.2

CDKN2A-210, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN2A, Length 748 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-210ENST00000530628 SMIM12Q96EX1 92 aa14.03□□□□□ -0.16
CDKN2A-210ENST00000530628 RNF185Q96GF1 192 aa14.03□□□□□ -0.16
CDKN2A-210ENST00000530628 LYZL1Q6UWQ5 148 aa14.02□□□□□ -0.17
CDKN2A-210ENST00000530628 TRAV1-1A0A0B4J248 108 aa14.01□□□□□ -0.17
CDKN2A-210ENST00000530628 A0A1B0GVG6 124 aa14.01□□□□□ -0.17
CDKN2A-210ENST00000530628 TEX46H3BTG2 121 aa14.01□□□□□ -0.17
CDKN2A-210ENST00000530628 IFNA1P01562 189 aa14.01□□□□□ -0.17
CDKN2A-210ENST00000530628 SLPIP03973 132 aa14.01□□□□□ -0.17
CDKN2A-210ENST00000530628 NTF3P20783 257 aa14.01□□□□□ -0.17
CDKN2A-210ENST00000530628 AMTP48728 403 aa14.01□□□□□ -0.17
CDKN2A-210ENST00000530628 SULT1A2P50226 295 aa14.01□□□□□ -0.17
CDKN2A-210ENST00000530628 COTL1Q14019 142 aa14.01□□□□□ -0.17
CDKN2A-210ENST00000530628 A0A087WYN8 130 aa14□□□□□ -0.17
CDKN2A-210ENST00000530628 BIN3Q9NQY0 253 aa14□□□□□ -0.17
CDKN2A-210ENST00000530628 CHTF8P0CG12 524 aa13.99□□□□□ -0.17
CDKN2A-210ENST00000530628 MT1HL1P0DM35 61 aa13.99□□□□□ -0.17
CDKN2A-210ENST00000530628 CFAP161Q6P656 301 aa13.99□□□□□ -0.17
CDKN2A-210ENST00000530628 TCTE3Q8IZS6 198 aa13.99□□□□□ -0.17
CDKN2A-210ENST00000530628 PDE6DO43924 150 aa13.98□□□□□ -0.17
CDKN2A-210ENST00000530628 MEF2BQ02080 365 aaPredicted RBP13.98□□□□□ -0.17
CDKN2A-210ENST00000530628 SPACA4Q8TDM5 124 aa13.98□□□□□ -0.17
CDKN2A-210ENST00000530628 MED9Q9NWA0 146 aa13.98□□□□□ -0.17
CDKN2A-210ENST00000530628 GAGE12HA6NDE8 117 aa13.97□□□□□ -0.17
CDKN2A-210ENST00000530628 C9orf62Q8N4C0 152 aa13.97□□□□□ -0.17
CDKN2A-210ENST00000530628 IGKV3OR2-268A0A0C4DH90 116 aa13.96□□□□□ -0.17
CDKN2A-210ENST00000530628 EIF5AL1Q6IS14 154 aaKnown RBP13.96□□□□□ -0.17
CDKN2A-210ENST00000530628 UBR4Q5T4S7 5183 aa13.96□□□□□ -0.17
CDKN2A-210ENST00000530628 TWIST1Q15672 202 aa13.95□□□□□ -0.18
CDKN2A-210ENST00000530628 C15orf56Q8N910 161 aa13.95□□□□□ -0.18
CDKN2A-210ENST00000530628 NUDT10Q8NFP7 164 aa13.95□□□□□ -0.18
CDKN2A-210ENST00000530628 C7orf33Q8WU49 177 aa13.95□□□□□ -0.18
CDKN2A-210ENST00000530628 NUDT11Q96G61 164 aa13.95□□□□□ -0.18
CDKN2A-210ENST00000530628 TRBV20OR9-2A0A075B6H5 130 aa13.94□□□□□ -0.18
CDKN2A-210ENST00000530628 CTRLP40313 264 aa13.94□□□□□ -0.18
CDKN2A-210ENST00000530628 PLAC8Q9NZF1 115 aa13.94□□□□□ -0.18
CDKN2A-210ENST00000530628 RPS10P46783 165 aaKnown RBP13.93□□□□□ -0.18
CDKN2A-210ENST00000530628 COX6A2Q02221 97 aa13.93□□□□□ -0.18
CDKN2A-210ENST00000530628 AMMECR1LQ6DCA0 310 aa13.93□□□□□ -0.18
CDKN2A-210ENST00000530628 AKAP14Q86UN6 197 aa13.93□□□□□ -0.18
CDKN2A-210ENST00000530628 PHOX2AO14813 284 aa13.92□□□□□ -0.18
CDKN2A-210ENST00000530628 HIGD2BQ4VC39 106 aa13.92□□□□□ -0.18
CDKN2A-210ENST00000530628 GATD1Q8NB37 220 aa13.92□□□□□ -0.18
CDKN2A-210ENST00000530628 NDUFS6O75380 124 aaKnown RBP13.91□□□□□ -0.18
CDKN2A-210ENST00000530628 CNFNQ9BYD5 112 aa13.91□□□□□ -0.18
CDKN2A-210ENST00000530628 TRAV26-2A0A0B4J265 109 aa13.9□□□□□ -0.18
CDKN2A-210ENST00000530628 NCR2O95944 276 aa13.9□□□□□ -0.18
CDKN2A-210ENST00000530628 BCL2P10415 239 aa13.9□□□□□ -0.18
CDKN2A-210ENST00000530628 MAJINQ3KP22 176 aa13.9□□□□□ -0.18
CDKN2A-210ENST00000530628 RNASEKQ6P5S7 137 aaKnown RBP13.9□□□□□ -0.18
CDKN2A-210ENST00000530628 CHCHD10Q8WYQ3 142 aaPredicted RBP13.9□□□□□ -0.18
CDKN2A-210ENST00000530628 RPP21Q9H633 154 aaKnown RBP13.9□□□□□ -0.18
CDKN2A-210ENST00000530628 SMIM15Q7Z3B0 74 aa13.89□□□□□ -0.19
CDKN2A-210ENST00000530628 PRSS3P2Q8NHM4 247 aa13.89□□□□□ -0.19
CDKN2A-210ENST00000530628 GTSF1Q8WW33 167 aa13.89□□□□□ -0.19
CDKN2A-210ENST00000530628 IGKV2-24A0A0C4DH68 120 aa13.88□□□□□ -0.19
CDKN2A-210ENST00000530628 H7C423 109 aa13.88□□□□□ -0.19
CDKN2A-210ENST00000530628 APCSP02743 223 aa13.88□□□□□ -0.19
CDKN2A-210ENST00000530628 RNASE7Q9H1E1 156 aaKnown RBP13.88□□□□□ -0.19
CDKN2A-210ENST00000530628 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.87□□□□□ -0.19
CDKN2A-210ENST00000530628 IGKV2-29A2NJV5 120 aaPredicted RBP13.87□□□□□ -0.19
CDKN2A-210ENST00000530628 RPL39LQ96EH5 51 aaKnown RBP13.87□□□□□ -0.19
CDKN2A-210ENST00000530628 TEX261Q6UWH6 196 aa13.86□□□□□ -0.19
CDKN2A-210ENST00000530628 STPG4Q8N801 248 aa13.86□□□□□ -0.19
CDKN2A-210ENST00000530628 OCC1Q8TAD7 63 aa13.86□□□□□ -0.19
CDKN2A-210ENST00000530628 GVQW2A0A096LPI5 108 aaPredicted RBP13.85□□□□□ -0.19
CDKN2A-210ENST00000530628 FGF6P10767 208 aa13.85□□□□□ -0.19
CDKN2A-210ENST00000530628 TAGLN2P37802 199 aaKnown RBP13.85□□□□□ -0.19
CDKN2A-210ENST00000530628 K7EN84 100 aa13.84□□□□□ -0.19
CDKN2A-210ENST00000530628 LYPD6BQ8NI32 183 aa13.84□□□□□ -0.19
CDKN2A-210ENST00000530628 SDHAF1A6NFY7 115 aa13.83□□□□□ -0.2
CDKN2A-210ENST00000530628 FOXA3P55318 350 aaPredicted RBP13.83□□□□□ -0.2
CDKN2A-210ENST00000530628 FOXI1Q12951 378 aa13.83□□□□□ -0.2
CDKN2A-210ENST00000530628 OR5A1Q8NGJ0 315 aa13.83□□□□□ -0.2
CDKN2A-210ENST00000530628 BTF3L4Q96K17 158 aa13.83□□□□□ -0.2
CDKN2A-210ENST00000530628 ZNF25P17030 456 aaPredicted RBP13.82□□□□□ -0.2
CDKN2A-210ENST00000530628 PMCHP20382 165 aa13.82□□□□□ -0.2
CDKN2A-210ENST00000530628 TMEM101Q96IK0 257 aa13.82□□□□□ -0.2
CDKN2A-210ENST00000530628 A0A096LNI7 61 aa13.81□□□□□ -0.2
CDKN2A-210ENST00000530628 I3L3M4 83 aa13.81□□□□□ -0.2
CDKN2A-210ENST00000530628 PRR3P79522 188 aaKnown RBP13.81□□□□□ -0.2
CDKN2A-210ENST00000530628 SLC51BQ86UW2 128 aa13.81□□□□□ -0.2
CDKN2A-210ENST00000530628 LINC01600Q96MT4 127 aa13.81□□□□□ -0.2
CDKN2A-210ENST00000530628 PKIGQ9Y2B9 76 aa13.81□□□□□ -0.2
CDKN2A-210ENST00000530628 GATCO43716 136 aaKnown RBP13.8□□□□□ -0.2
CDKN2A-210ENST00000530628 XCL1P47992 114 aa13.8□□□□□ -0.2
CDKN2A-210ENST00000530628 LINC00474Q9P2X8 69 aa13.8□□□□□ -0.2
CDKN2A-210ENST00000530628 IGHV1-58A0A0C4DH39 117 aa13.78□□□□□ -0.2
CDKN2A-210ENST00000530628 LINC00959A0A1B0GUT2 108 aa13.78□□□□□ -0.2
CDKN2A-210ENST00000530628 FAM231BA6NCW3 169 aa13.78□□□□□ -0.2
CDKN2A-210ENST00000530628 A8MWL6 223 aa13.78□□□□□ -0.2
CDKN2A-210ENST00000530628 CCL25O15444 150 aa13.78□□□□□ -0.2
CDKN2A-210ENST00000530628 TRBV6-5A0A0K0K1A5 114 aa13.77□□□□□ -0.21
CDKN2A-210ENST00000530628 SS18Q15532 418 aa13.76□□□□□ -0.21
CDKN2A-210ENST00000530628 FAM231DQ6ZW35 169 aa13.76□□□□□ -0.21
CDKN2A-210ENST00000530628 BORCS7Q96B45 105 aa13.76□□□□□ -0.21
CDKN2A-210ENST00000530628 ST20Q9HBF5 79 aa13.76□□□□□ -0.21
CDKN2A-210ENST00000530628 ESDP10768 282 aa13.75□□□□□ -0.21
CDKN2A-210ENST00000530628 LINC00526Q96FQ7 95 aa13.75□□□□□ -0.21
CDKN2A-210ENST00000530628 CARD19Q96LW7 228 aa13.75□□□□□ -0.21
CDKN2A-210ENST00000530628 SPINK6Q6UWN8 80 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms