RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 PHLDA1Q8WV24 401 aaPredicted RBP10.16□□□□□ -0.78
TTC39A-216ENST00000530004 RPL36ALQ969Q0 106 aaKnown RBP10.16□□□□□ -0.78
TTC39A-216ENST00000530004 IGHV3-38A0A0C4DH36 116 aa10.15□□□□□ -0.78
TTC39A-216ENST00000530004 C20orf202A1L168 122 aa10.15□□□□□ -0.78
TTC39A-216ENST00000530004 SPART-AS1P0CW21 52 aa10.15□□□□□ -0.78
TTC39A-216ENST00000530004 S100A12P80511 92 aa10.15□□□□□ -0.78
TTC39A-216ENST00000530004 TEX43Q6ZNM6 134 aa10.15□□□□□ -0.78
TTC39A-216ENST00000530004 CYSLTR1Q9Y271 337 aa10.15□□□□□ -0.78
TTC39A-216ENST00000530004 TEX48A0A1B0GUV7 120 aa10.14□□□□□ -0.79
TTC39A-216ENST00000530004 GAGE12JA6NER3 117 aa10.14□□□□□ -0.79
TTC39A-216ENST00000530004 GAGE1Q13065 139 aa10.14□□□□□ -0.79
TTC39A-216ENST00000530004 GAGE4Q13068 117 aa10.14□□□□□ -0.79
TTC39A-216ENST00000530004 GAGE5Q13069 117 aa10.14□□□□□ -0.79
TTC39A-216ENST00000530004 GAGE13Q4V321 117 aa10.14□□□□□ -0.79
TTC39A-216ENST00000530004 SCGB3A1Q96QR1 104 aa10.14□□□□□ -0.79
TTC39A-216ENST00000530004 DAD1P61803 113 aa10.14□□□□□ -0.79
TTC39A-216ENST00000530004 RPL39P62891 51 aaKnown RBP10.14□□□□□ -0.79
TTC39A-216ENST00000530004 ATOH7Q8N100 152 aa10.14□□□□□ -0.79
TTC39A-216ENST00000530004 LOC100131303A0A0U1RQF7 123 aa10.13□□□□□ -0.79
TTC39A-216ENST00000530004 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.13□□□□□ -0.79
TTC39A-216ENST00000530004 PRSS1P07477 247 aa10.13□□□□□ -0.79
TTC39A-216ENST00000530004 LINC01545Q5VT33 79 aa10.13□□□□□ -0.79
TTC39A-216ENST00000530004 C11orf45Q8TAV5 145 aa10.13□□□□□ -0.79
TTC39A-216ENST00000530004 PMCHL2Q9BQD1 86 aa10.13□□□□□ -0.79
TTC39A-216ENST00000530004 PRADC1Q9BSG0 188 aa10.13□□□□□ -0.79
TTC39A-216ENST00000530004 HHLA3Q9XRX5 114 aa10.13□□□□□ -0.79
TTC39A-216ENST00000530004 UBE2D3P61077 147 aa10.12□□□□□ -0.79
TTC39A-216ENST00000530004 UBE2D2P62837 147 aa10.12□□□□□ -0.79
TTC39A-216ENST00000530004 COTL1Q14019 142 aa10.12□□□□□ -0.79
TTC39A-216ENST00000530004 LINC01549A6NIU2 74 aa10.11□□□□□ -0.79
TTC39A-216ENST00000530004 LGALS9CQ6DKI2 356 aa10.11□□□□□ -0.79
TTC39A-216ENST00000530004 Q6ZN92 141 aa10.11□□□□□ -0.79
TTC39A-216ENST00000530004 ERASQ7Z444 233 aa10.11□□□□□ -0.79
TTC39A-216ENST00000530004 C20orf203Q8NBC4 194 aa10.11□□□□□ -0.79
TTC39A-216ENST00000530004 COL7A1Q02388 2944 aa10.11□□□□□ -0.79
TTC39A-216ENST00000530004 C12orf74Q32Q52 190 aa10.11□□□□□ -0.79
TTC39A-216ENST00000530004 DAZ4Q86SG3 579 aaKnown RBP10.11□□□□□ -0.79
TTC39A-216ENST00000530004 VAMP8Q9BV40 100 aa10.11□□□□□ -0.79
TTC39A-216ENST00000530004 DAZ3Q9NR90 486 aaKnown RBP10.11□□□□□ -0.79
TTC39A-216ENST00000530004 CRYBA4P53673 196 aa10.1□□□□□ -0.79
TTC39A-216ENST00000530004 NANOS2P60321 138 aaKnown RBP10.1□□□□□ -0.79
TTC39A-216ENST00000530004 ZNF664Q8N3J9 261 aa10.1□□□□□ -0.79
TTC39A-216ENST00000530004 PRO0255Q9UI72 69 aa10.1□□□□□ -0.79
TTC39A-216ENST00000530004 PAM16Q9Y3D7 125 aa10.1□□□□□ -0.79
TTC39A-216ENST00000530004 IGIPA6NJ69 53 aa10.09□□□□□ -0.79
TTC39A-216ENST00000530004 PCP4L1A6NKN8 68 aa10.09□□□□□ -0.79
TTC39A-216ENST00000530004 ATP5G1P05496 136 aa10.09□□□□□ -0.79
TTC39A-216ENST00000530004 CHCHD7Q9BUK0 85 aa10.09□□□□□ -0.79
TTC39A-216ENST00000530004 STAB2Q8WWQ8 2551 aa10.09□□□□□ -0.79
TTC39A-216ENST00000530004 ODF1Q14990 250 aa10.09□□□□□ -0.79
TTC39A-216ENST00000530004 BAALCQ8WXS3 180 aa10.09□□□□□ -0.79
TTC39A-216ENST00000530004 TMEM141Q96I45 108 aa10.09□□□□□ -0.79
TTC39A-216ENST00000530004 TIMM17AQ99595 171 aa10.09□□□□□ -0.79
TTC39A-216ENST00000530004 GYPEP15421 78 aa10.08□□□□□ -0.8
TTC39A-216ENST00000530004 MAJINQ3KP22 176 aa10.08□□□□□ -0.8
TTC39A-216ENST00000530004 Q6ZTC4 211 aa10.08□□□□□ -0.8
TTC39A-216ENST00000530004 PRO1933Q9H354 126 aa10.08□□□□□ -0.8
TTC39A-216ENST00000530004 PAX4O43316 350 aa10.07□□□□□ -0.8
TTC39A-216ENST00000530004 LINC00694P0DN24 101 aa10.07□□□□□ -0.8
TTC39A-216ENST00000530004 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.06□□□□□ -0.8
TTC39A-216ENST00000530004 TRAV9-2A0A087WT02 112 aa10.06□□□□□ -0.8
TTC39A-216ENST00000530004 A0A087WX48 190 aa10.06□□□□□ -0.8
TTC39A-216ENST00000530004 TRAV12-1A0A0B4J245 112 aa10.06□□□□□ -0.8
TTC39A-216ENST00000530004 IGKV2-29A2NJV5 120 aaPredicted RBP10.06□□□□□ -0.8
TTC39A-216ENST00000530004 HTN3P15516 51 aa10.06□□□□□ -0.8
TTC39A-216ENST00000530004 SPATA45Q537H7 98 aa10.06□□□□□ -0.8
TTC39A-216ENST00000530004 NTM-AS1Q6ZSK4 140 aa10.06□□□□□ -0.8
TTC39A-216ENST00000530004 F5H768 121 aa10.06□□□□□ -0.8
TTC39A-216ENST00000530004 PKIAP61925 76 aa10.06□□□□□ -0.8
TTC39A-216ENST00000530004 hDV102S1A0JD36 115 aa10.05□□□□□ -0.8
TTC39A-216ENST00000530004 TSTD3H0UI37 97 aa10.05□□□□□ -0.8
TTC39A-216ENST00000530004 GTSF1LQ9H1H1 148 aa10.05□□□□□ -0.8
TTC39A-216ENST00000530004 MRPL35Q9NZE8 188 aaKnown RBP10.05□□□□□ -0.8
TTC39A-216ENST00000530004 A0A0J9YY99 117 aa10.04□□□□□ -0.8
TTC39A-216ENST00000530004 PRSS29PA6NIE9 313 aa10.04□□□□□ -0.8
TTC39A-216ENST00000530004 ZC2HC1BQ5TFG8 222 aa10.04□□□□□ -0.8
TTC39A-216ENST00000530004 VSIG2Q96IQ7 327 aa10.04□□□□□ -0.8
TTC39A-216ENST00000530004 WWC2-AS2Q96NR7 200 aa10.04□□□□□ -0.8
TTC39A-216ENST00000530004 OPRPNQ99935 248 aaPredicted RBP10.04□□□□□ -0.8
TTC39A-216ENST00000530004 UBE2D4Q9Y2X8 147 aa10.04□□□□□ -0.8
TTC39A-216ENST00000530004 PYGO1Q9Y3Y4 419 aa10.04□□□□□ -0.8
TTC39A-216ENST00000530004 IGLV4-3A0A075B6K6 122 aa10.03□□□□□ -0.8
TTC39A-216ENST00000530004 TRAV26-1A0A087WT03 109 aa10.03□□□□□ -0.8
TTC39A-216ENST00000530004 HSBP1L1C9JCN9 74 aa10.03□□□□□ -0.8
TTC39A-216ENST00000530004 DPM2O94777 84 aa10.03□□□□□ -0.8
TTC39A-216ENST00000530004 PMVKQ15126 192 aa10.03□□□□□ -0.8
TTC39A-216ENST00000530004 CEMP1Q6PRD7 247 aaPredicted RBP10.03□□□□□ -0.8
TTC39A-216ENST00000530004 CHTOPQ9Y3Y2 248 aaKnown RBP10.03□□□□□ -0.8
TTC39A-216ENST00000530004 TRAV10A0A0B4J240 114 aa10.03□□□□□ -0.8
TTC39A-216ENST00000530004 F8VRH5 84 aa10.03□□□□□ -0.8
TTC39A-216ENST00000530004 IGKCP01834 107 aa10.03□□□□□ -0.8
TTC39A-216ENST00000530004 ATP6V0E2Q8NHE4 81 aa10.03□□□□□ -0.8
TTC39A-216ENST00000530004 CST9LQ9H4G1 147 aa10.03□□□□□ -0.8
TTC39A-216ENST00000530004 SPANXA1Q9NS26 97 aa10.03□□□□□ -0.8
TTC39A-216ENST00000530004 DEFB131BA0A096LNP1 70 aa10.02□□□□□ -0.81
TTC39A-216ENST00000530004 TMEM243Q9BU79 118 aa10.02□□□□□ -0.81
TTC39A-216ENST00000530004 TRBV25-1A0A075B6N4 114 aa10.01□□□□□ -0.81
TTC39A-216ENST00000530004 A0A096LPF7 62 aa10.01□□□□□ -0.81
TTC39A-216ENST00000530004 TGP01266 2768 aa10.01□□□□□ -0.81
TTC39A-216ENST00000530004 TRBV6-8A0A0A6YYG3 113 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms