RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 GATD1Q8NB37 220 aa7.87□□□□□ -1.15
COPB1-206ENST00000529210 C20orf203Q8NBC4 194 aa7.87□□□□□ -1.15
COPB1-206ENST00000529210 TMEM243Q9BU79 118 aa7.87□□□□□ -1.15
COPB1-206ENST00000529210 TRAV8-4A0A0B4J246 113 aa7.86□□□□□ -1.15
COPB1-206ENST00000529210 FAM231BA6NCW3 169 aa7.86□□□□□ -1.15
COPB1-206ENST00000529210 SMR3BP02814 79 aaPredicted RBP7.86□□□□□ -1.15
COPB1-206ENST00000529210 INAFM2P0DMQ5 153 aa7.86□□□□□ -1.15
COPB1-206ENST00000529210 LINC01551Q86U37 167 aa7.86□□□□□ -1.15
COPB1-206ENST00000529210 LINC00269Q8N2A0 174 aa7.86□□□□□ -1.15
COPB1-206ENST00000529210 GFRA4Q9GZZ7 299 aa7.86□□□□□ -1.15
COPB1-206ENST00000529210 REG3AQ06141 175 aa7.85□□□□□ -1.15
COPB1-206ENST00000529210 COTL1Q14019 142 aa7.85□□□□□ -1.15
COPB1-206ENST00000529210 SMIM15Q7Z3B0 74 aa7.85□□□□□ -1.15
COPB1-206ENST00000529210 SMIM7Q9BQ49 75 aa7.85□□□□□ -1.15
COPB1-206ENST00000529210 EIF5A2Q9GZV4 153 aaKnown RBP7.85□□□□□ -1.15
COPB1-206ENST00000529210 OSTCQ9NRP0 149 aa7.85□□□□□ -1.15
COPB1-206ENST00000529210 MYCBP2O75592 4640 aa7.85□□□□□ -1.15
COPB1-206ENST00000529210 TRBV6-5A0A0K0K1A5 114 aa7.84□□□□□ -1.15
COPB1-206ENST00000529210 A0A1B0GVG6 124 aa7.84□□□□□ -1.15
COPB1-206ENST00000529210 USP17L23D6RBM5 183 aa7.84□□□□□ -1.15
COPB1-206ENST00000529210 NCR2O95944 276 aa7.84□□□□□ -1.15
COPB1-206ENST00000529210 SRP19P09132 144 aaKnown RBP7.84□□□□□ -1.15
COPB1-206ENST00000529210 HAMPP81172 84 aa7.84□□□□□ -1.15
COPB1-206ENST00000529210 DGAT2L7PQ6IED9 249 aa7.84□□□□□ -1.15
COPB1-206ENST00000529210 TSKUQ8WUA8 353 aa7.84□□□□□ -1.15
COPB1-206ENST00000529210 IGLV4-60A0A075B6I1 120 aa7.83□□□□□ -1.16
COPB1-206ENST00000529210 H7C423 109 aa7.83□□□□□ -1.16
COPB1-206ENST00000529210 AMTP48728 403 aa7.83□□□□□ -1.16
COPB1-206ENST00000529210 CLRN3Q8NCR9 226 aa7.83□□□□□ -1.16
COPB1-206ENST00000529210 CHAC1Q9BUX1 264 aa7.83□□□□□ -1.16
COPB1-206ENST00000529210 TRAV26-2A0A0B4J265 109 aa7.82□□□□□ -1.16
COPB1-206ENST00000529210 A0A1B0GUT8 65 aa7.82□□□□□ -1.16
COPB1-206ENST00000529210 ZNF727A8MUV8 499 aa7.82□□□□□ -1.16
COPB1-206ENST00000529210 HLA-DQA1P01909 254 aa7.82□□□□□ -1.16
COPB1-206ENST00000529210 PRSS1P07477 247 aa7.82□□□□□ -1.16
COPB1-206ENST00000529210 FAM74A3Q4VXF1 159 aa7.82□□□□□ -1.16
COPB1-206ENST00000529210 SCXQ7RTU7 201 aa7.82□□□□□ -1.16
COPB1-206ENST00000529210 TMEM191AQ9H0A3 160 aa7.82□□□□□ -1.16
COPB1-206ENST00000529210 SDHAF1A6NFY7 115 aa7.81□□□□□ -1.16
COPB1-206ENST00000529210 HIGD1CA8MV81 97 aa7.81□□□□□ -1.16
COPB1-206ENST00000529210 UBE2L6O14933 153 aa7.81□□□□□ -1.16
COPB1-206ENST00000529210 CEBPGP53567 150 aa7.81□□□□□ -1.16
COPB1-206ENST00000529210 LINC01620Q4KN68 170 aa7.81□□□□□ -1.16
COPB1-206ENST00000529210 CLPSL2Q6UWE3 100 aa7.81□□□□□ -1.16
COPB1-206ENST00000529210 C9orf163Q8N9P6 203 aa7.81□□□□□ -1.16
COPB1-206ENST00000529210 RPL39LQ96EH5 51 aaKnown RBP7.81□□□□□ -1.16
COPB1-206ENST00000529210 SMDT1Q9H4I9 107 aa7.81□□□□□ -1.16
COPB1-206ENST00000529210 DMBT1Q9UGM3 2413 aaPredicted RBP7.81□□□□□ -1.16
COPB1-206ENST00000529210 FLG2Q5D862 2391 aaPredicted RBP7.8□□□□□ -1.16
COPB1-206ENST00000529210 PLA2G1BP04054 148 aaKnown RBP7.8□□□□□ -1.16
COPB1-206ENST00000529210 CNBPP62633 177 aaKnown RBP7.8□□□□□ -1.16
COPB1-206ENST00000529210 ISOC2Q96AB3 205 aa7.8□□□□□ -1.16
COPB1-206ENST00000529210 BORCS7Q96B45 105 aa7.8□□□□□ -1.16
COPB1-206ENST00000529210 V9GYV3 84 aa7.8□□□□□ -1.16
COPB1-206ENST00000529210 TMEM241Q24JQ0 296 aa7.79□□□□□ -1.16
COPB1-206ENST00000529210 CIRBP-AS1Q8TBR5 109 aa7.79□□□□□ -1.16
COPB1-206ENST00000529210 RNF185Q96GF1 192 aa7.79□□□□□ -1.16
COPB1-206ENST00000529210 IGLV10-54A0A075B6I4 117 aa7.78□□□□□ -1.16
COPB1-206ENST00000529210 I3L3M4 83 aa7.78□□□□□ -1.16
COPB1-206ENST00000529210 APCSP02743 223 aa7.78□□□□□ -1.16
COPB1-206ENST00000529210 ESDP10768 282 aa7.78□□□□□ -1.16
COPB1-206ENST00000529210 ZNF25P17030 456 aaPredicted RBP7.78□□□□□ -1.16
COPB1-206ENST00000529210 RAB4AP20338 218 aa7.78□□□□□ -1.16
COPB1-206ENST00000529210 POLR2KP53803 58 aaKnown RBP7.78□□□□□ -1.16
COPB1-206ENST00000529210 RPL23P62829 140 aaKnown RBP7.78□□□□□ -1.16
COPB1-206ENST00000529210 MRAP2Q96G30 205 aa7.78□□□□□ -1.16
COPB1-206ENST00000529210 TRBV27A0A0K0K1C4 114 aa7.77□□□□□ -1.17
COPB1-206ENST00000529210 KRTAP10-4P60372 401 aaPredicted RBP7.77□□□□□ -1.17
COPB1-206ENST00000529210 CIRBPQ14011 172 aaKnown RBP7.77□□□□□ -1.17
COPB1-206ENST00000529210 NUP35Q8NFH5 326 aa7.77□□□□□ -1.17
COPB1-206ENST00000529210 NAT8Q9UHE5 227 aa7.77□□□□□ -1.17
COPB1-206ENST00000529210 HERC1Q15751 4861 aa7.77□□□□□ -1.17
COPB1-206ENST00000529210 C9JQL5 133 aa7.76□□□□□ -1.17
COPB1-206ENST00000529210 GAS8-AS1O95177 125 aa7.76□□□□□ -1.17
COPB1-206ENST00000529210 PPP1R17O96001 155 aa7.76□□□□□ -1.17
COPB1-206ENST00000529210 FGF6P10767 208 aa7.76□□□□□ -1.17
COPB1-206ENST00000529210 RIGQ13278 110 aa7.76□□□□□ -1.17
COPB1-206ENST00000529210 PEA15Q15121 130 aa7.76□□□□□ -1.17
COPB1-206ENST00000529210 SDIM1Q6ZPB5 146 aa7.76□□□□□ -1.17
COPB1-206ENST00000529210 DEFB104AQ8WTQ1 72 aa7.76□□□□□ -1.17
COPB1-206ENST00000529210 ST20Q9HBF5 79 aa7.76□□□□□ -1.17
COPB1-206ENST00000529210 NAT8BQ9UHF3 227 aa7.76□□□□□ -1.17
COPB1-206ENST00000529210 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.75□□□□□ -1.17
COPB1-206ENST00000529210 SMIM27A0A1W2PRY6 76 aa7.75□□□□□ -1.17
COPB1-206ENST00000529210 IGKV2-29A2NJV5 120 aaPredicted RBP7.75□□□□□ -1.17
COPB1-206ENST00000529210 TSHBP01222 138 aa7.75□□□□□ -1.17
COPB1-206ENST00000529210 PMCHP20382 165 aa7.75□□□□□ -1.17
COPB1-206ENST00000529210 AMMECR1LQ6DCA0 310 aa7.75□□□□□ -1.17
COPB1-206ENST00000529210 MRPL52Q86TS9 123 aaKnown RBP7.75□□□□□ -1.17
COPB1-206ENST00000529210 AMN1Q8IY45 258 aa7.75□□□□□ -1.17
COPB1-206ENST00000529210 A0A1B0GW15 77 aa7.74□□□□□ -1.17
COPB1-206ENST00000529210 hDV102S1A0JD36 115 aa7.74□□□□□ -1.17
COPB1-206ENST00000529210 RPS10P46783 165 aaKnown RBP7.74□□□□□ -1.17
COPB1-206ENST00000529210 SRSF3P84103 164 aaKnown RBP7.74□□□□□ -1.17
COPB1-206ENST00000529210 CFAP161Q6P656 301 aa7.74□□□□□ -1.17
COPB1-206ENST00000529210 C15orf56Q8N910 161 aa7.74□□□□□ -1.17
COPB1-206ENST00000529210 OR5A1Q8NGJ0 315 aa7.74□□□□□ -1.17
COPB1-206ENST00000529210 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.73□□□□□ -1.17
COPB1-206ENST00000529210 A6NJY4 79 aa7.73□□□□□ -1.17
COPB1-206ENST00000529210 KRTAP29-1A8MX34 341 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms