RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 BIN3Q9NQY0 253 aa16.55■□□□□ 0.24
TRIM3-206ENST00000528227 MED9Q9NWA0 146 aa16.55■□□□□ 0.24
TRIM3-206ENST00000528227 C9orf62Q8N4C0 152 aa16.54■□□□□ 0.24
TRIM3-206ENST00000528227 CTRLP40313 264 aa16.53■□□□□ 0.24
TRIM3-206ENST00000528227 CIRBPQ14011 172 aaKnown RBP16.53■□□□□ 0.24
TRIM3-206ENST00000528227 BCL2P10415 239 aa16.52■□□□□ 0.24
TRIM3-206ENST00000528227 WDR73Q6P4I2 378 aa16.52■□□□□ 0.24
TRIM3-206ENST00000528227 HMCN2Q8NDA2 5059 aa16.52■□□□□ 0.23
TRIM3-206ENST00000528227 UBE2L6O14933 153 aa16.51■□□□□ 0.23
TRIM3-206ENST00000528227 AMTP48728 403 aa16.51■□□□□ 0.23
TRIM3-206ENST00000528227 COTL1Q14019 142 aa16.51■□□□□ 0.23
TRIM3-206ENST00000528227 NUDT10Q8NFP7 164 aa16.51■□□□□ 0.23
TRIM3-206ENST00000528227 NUDT11Q96G61 164 aa16.51■□□□□ 0.23
TRIM3-206ENST00000528227 SLPIP03973 132 aa16.5■□□□□ 0.23
TRIM3-206ENST00000528227 CNFNQ9BYD5 112 aa16.5■□□□□ 0.23
TRIM3-206ENST00000528227 AP5S1Q9NUS5 200 aa16.5■□□□□ 0.23
TRIM3-206ENST00000528227 IGHV3-64A0A075B6Q5 118 aa16.48■□□□□ 0.23
TRIM3-206ENST00000528227 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.48■□□□□ 0.23
TRIM3-206ENST00000528227 TWIST1Q15672 202 aa16.48■□□□□ 0.23
TRIM3-206ENST00000528227 GATD1Q8NB37 220 aa16.47■□□□□ 0.23
TRIM3-206ENST00000528227 RPP21Q9H633 154 aaKnown RBP16.46■□□□□ 0.23
TRIM3-206ENST00000528227 TRAV26-2A0A0B4J265 109 aa16.45■□□□□ 0.22
TRIM3-206ENST00000528227 RNASE7Q9H1E1 156 aaKnown RBP16.45■□□□□ 0.22
TRIM3-206ENST00000528227 PLA2G2DQ9UNK4 145 aa16.45■□□□□ 0.22
TRIM3-206ENST00000528227 K7EN84 100 aa16.44■□□□□ 0.22
TRIM3-206ENST00000528227 CHTF8P0CG12 524 aa16.44■□□□□ 0.22
TRIM3-206ENST00000528227 TAGLN2P37802 199 aaKnown RBP16.44■□□□□ 0.22
TRIM3-206ENST00000528227 C15orf56Q8N910 161 aa16.44■□□□□ 0.22
TRIM3-206ENST00000528227 SPACA4Q8TDM5 124 aa16.44■□□□□ 0.22
TRIM3-206ENST00000528227 RNF185Q96GF1 192 aa16.44■□□□□ 0.22
TRIM3-206ENST00000528227 GAGE12HA6NDE8 117 aa16.43■□□□□ 0.22
TRIM3-206ENST00000528227 SLC51BQ86UW2 128 aa16.43■□□□□ 0.22
TRIM3-206ENST00000528227 OCC1Q8TAD7 63 aa16.43■□□□□ 0.22
TRIM3-206ENST00000528227 A0A087WYN8 130 aa16.42■□□□□ 0.22
TRIM3-206ENST00000528227 TCTE3Q8IZS6 198 aa16.42■□□□□ 0.22
TRIM3-206ENST00000528227 DPH3Q96FX2 82 aa16.42■□□□□ 0.22
TRIM3-206ENST00000528227 Q6ZNX1 250 aa16.41■□□□□ 0.22
TRIM3-206ENST00000528227 GTSF1Q8WW33 167 aa16.41■□□□□ 0.22
TRIM3-206ENST00000528227 RPL39LQ96EH5 51 aaKnown RBP16.41■□□□□ 0.22
TRIM3-206ENST00000528227 IGKV3OR2-268A0A0C4DH90 116 aa16.4■□□□□ 0.22
TRIM3-206ENST00000528227 CFAP161Q6P656 301 aa16.4■□□□□ 0.22
TRIM3-206ENST00000528227 Q6ZRU5 148 aa16.4■□□□□ 0.22
TRIM3-206ENST00000528227 NCR2O95944 276 aa16.39■□□□□ 0.21
TRIM3-206ENST00000528227 MT1HL1P0DM35 61 aa16.39■□□□□ 0.21
TRIM3-206ENST00000528227 FOXA3P55318 350 aaPredicted RBP16.38■□□□□ 0.21
TRIM3-206ENST00000528227 AMMECR1LQ6DCA0 310 aa16.38■□□□□ 0.21
TRIM3-206ENST00000528227 PLAC8Q9NZF1 115 aa16.38■□□□□ 0.21
TRIM3-206ENST00000528227 H7C423 109 aa16.37■□□□□ 0.21
TRIM3-206ENST00000528227 SMIM15Q7Z3B0 74 aa16.37■□□□□ 0.21
TRIM3-206ENST00000528227 CHCHD10Q8WYQ3 142 aaPredicted RBP16.37■□□□□ 0.21
TRIM3-206ENST00000528227 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.36■□□□□ 0.21
TRIM3-206ENST00000528227 IGKV2-29A2NJV5 120 aaPredicted RBP16.36■□□□□ 0.21
TRIM3-206ENST00000528227 APCSP02743 223 aa16.36■□□□□ 0.21
TRIM3-206ENST00000528227 RPS10P46783 165 aaKnown RBP16.36■□□□□ 0.21
TRIM3-206ENST00000528227 HIGD2BQ4VC39 106 aa16.36■□□□□ 0.21
TRIM3-206ENST00000528227 TEX261Q6UWH6 196 aa16.36■□□□□ 0.21
TRIM3-206ENST00000528227 SDHAF1A6NFY7 115 aa16.35■□□□□ 0.21
TRIM3-206ENST00000528227 COX6A2Q02221 97 aa16.35■□□□□ 0.21
TRIM3-206ENST00000528227 RNASEKQ6P5S7 137 aaKnown RBP16.35■□□□□ 0.21
TRIM3-206ENST00000528227 FGF6P10767 208 aa16.34■□□□□ 0.21
TRIM3-206ENST00000528227 GVQW2A0A096LPI5 108 aaPredicted RBP16.32■□□□□ 0.2
TRIM3-206ENST00000528227 TMEM250H0YL14 139 aa16.32■□□□□ 0.2
TRIM3-206ENST00000528227 GATCO43716 136 aaKnown RBP16.32■□□□□ 0.2
TRIM3-206ENST00000528227 NDUFS6O75380 124 aaKnown RBP16.32■□□□□ 0.2
TRIM3-206ENST00000528227 FAM231DQ6ZW35 169 aa16.32■□□□□ 0.2
TRIM3-206ENST00000528227 PRSS3P2Q8NHM4 247 aa16.32■□□□□ 0.2
TRIM3-206ENST00000528227 PHOX2AO14813 284 aa16.31■□□□□ 0.2
TRIM3-206ENST00000528227 FOXI1Q12951 378 aa16.31■□□□□ 0.2
TRIM3-206ENST00000528227 A8MWL6 223 aa16.3■□□□□ 0.2
TRIM3-206ENST00000528227 I3L3M4 83 aa16.3■□□□□ 0.2
TRIM3-206ENST00000528227 ZNF25P17030 456 aaPredicted RBP16.3■□□□□ 0.2
TRIM3-206ENST00000528227 C7orf33Q8WU49 177 aa16.3■□□□□ 0.2
TRIM3-206ENST00000528227 UBR4Q5T4S7 5183 aa16.3■□□□□ 0.2
TRIM3-206ENST00000528227 TRBV6-5A0A0K0K1A5 114 aa16.29■□□□□ 0.2
TRIM3-206ENST00000528227 FAM231BA6NCW3 169 aa16.29■□□□□ 0.2
TRIM3-206ENST00000528227 MAJINQ3KP22 176 aa16.29■□□□□ 0.2
TRIM3-206ENST00000528227 OR5A1Q8NGJ0 315 aa16.29■□□□□ 0.2
TRIM3-206ENST00000528227 IGKV2-24A0A0C4DH68 120 aa16.28■□□□□ 0.2
TRIM3-206ENST00000528227 PMCHP20382 165 aa16.28■□□□□ 0.2
TRIM3-206ENST00000528227 CT83Q5H943 113 aa16.27■□□□□ 0.2
TRIM3-206ENST00000528227 GAS8-AS1O95177 125 aa16.26■□□□□ 0.19
TRIM3-206ENST00000528227 ESDP10768 282 aa16.26■□□□□ 0.19
TRIM3-206ENST00000528227 BLOC1S1P78537 153 aa16.26■□□□□ 0.19
TRIM3-206ENST00000528227 BTF3L4Q96K17 158 aa16.26■□□□□ 0.19
TRIM3-206ENST00000528227 TSHBP01222 138 aa16.25■□□□□ 0.19
TRIM3-206ENST00000528227 XCL1P47992 114 aa16.25■□□□□ 0.19
TRIM3-206ENST00000528227 ALKAL2Q6UX46 152 aa16.25■□□□□ 0.19
TRIM3-206ENST00000528227 LYPD6BQ8NI32 183 aa16.25■□□□□ 0.19
TRIM3-206ENST00000528227 TMEM101Q96IK0 257 aa16.25■□□□□ 0.19
TRIM3-206ENST00000528227 LINC00959A0A1B0GUT2 108 aa16.24■□□□□ 0.19
TRIM3-206ENST00000528227 STPG4Q8N801 248 aa16.24■□□□□ 0.19
TRIM3-206ENST00000528227 ST20Q9HBF5 79 aa16.24■□□□□ 0.19
TRIM3-206ENST00000528227 A0A096LNI7 61 aa16.23■□□□□ 0.19
TRIM3-206ENST00000528227 CCL25O15444 150 aa16.23■□□□□ 0.19
TRIM3-206ENST00000528227 CEBPGP53567 150 aa16.23■□□□□ 0.19
TRIM3-206ENST00000528227 BORCS7Q96B45 105 aa16.23■□□□□ 0.19
TRIM3-206ENST00000528227 TMEM242Q9NWH2 141 aa16.23■□□□□ 0.19
TRIM3-206ENST00000528227 MRAP2Q96G30 205 aa16.22■□□□□ 0.19
TRIM3-206ENST00000528227 FAM210AQ96ND0 272 aa16.22■□□□□ 0.19
TRIM3-206ENST00000528227 IGHV1-58A0A0C4DH39 117 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms