RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 SAMD10Q9BYL1 202 aa9.48□□□□□ -0.89
CAPN1-212ENST00000527887 JPT2Q9H910 190 aa9.48□□□□□ -0.89
CAPN1-212ENST00000527887 GRIFINA4D1Z8 144 aa9.47□□□□□ -0.89
CAPN1-212ENST00000527887 HIST1H2BKO60814 126 aa9.47□□□□□ -0.89
CAPN1-212ENST00000527887 HIST1H2BJP06899 126 aa9.47□□□□□ -0.89
CAPN1-212ENST00000527887 TRGC1P0CF51 173 aa9.47□□□□□ -0.89
CAPN1-212ENST00000527887 NTF3P20783 257 aa9.47□□□□□ -0.89
CAPN1-212ENST00000527887 HIST1H2BOP23527 126 aa9.47□□□□□ -0.89
CAPN1-212ENST00000527887 HIST1H2BBP33778 126 aa9.47□□□□□ -0.89
CAPN1-212ENST00000527887 HIST1H2BDP58876 126 aa9.47□□□□□ -0.89
CAPN1-212ENST00000527887 HIST1H2BCP62807 126 aa9.47□□□□□ -0.89
CAPN1-212ENST00000527887 HIST2H2BEQ16778 126 aa9.47□□□□□ -0.89
CAPN1-212ENST00000527887 COA6Q5JTJ3 125 aaKnown RBP9.47□□□□□ -0.89
CAPN1-212ENST00000527887 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.47□□□□□ -0.89
CAPN1-212ENST00000527887 C14orf178Q8N769 122 aaPredicted RBP9.47□□□□□ -0.89
CAPN1-212ENST00000527887 HIST1H2BHQ93079 126 aa9.47□□□□□ -0.89
CAPN1-212ENST00000527887 HIST1H2BNQ99877 126 aa9.47□□□□□ -0.89
CAPN1-212ENST00000527887 HIST1H2BMQ99879 126 aa9.47□□□□□ -0.89
CAPN1-212ENST00000527887 TMEM191AQ9H0A3 160 aa9.47□□□□□ -0.89
CAPN1-212ENST00000527887 FAT1Q14517 4588 aa9.46□□□□□ -0.89
CAPN1-212ENST00000527887 S100A6P06703 90 aa9.46□□□□□ -0.9
CAPN1-212ENST00000527887 CAMPP49913 170 aa9.46□□□□□ -0.9
CAPN1-212ENST00000527887 RAB4BP61018 213 aa9.46□□□□□ -0.9
CAPN1-212ENST00000527887 SMIM15Q7Z3B0 74 aa9.46□□□□□ -0.9
CAPN1-212ENST00000527887 CHCHD7Q9BUK0 85 aa9.46□□□□□ -0.9
CAPN1-212ENST00000527887 TPPP3Q9BW30 176 aa9.46□□□□□ -0.9
CAPN1-212ENST00000527887 VPS13BQ7Z7G8 4022 aa9.46□□□□□ -0.9
CAPN1-212ENST00000527887 M0R381 172 aa9.45□□□□□ -0.9
CAPN1-212ENST00000527887 RPL36AP83881 106 aaKnown RBP9.45□□□□□ -0.9
CAPN1-212ENST00000527887 TWIST1Q15672 202 aa9.45□□□□□ -0.9
CAPN1-212ENST00000527887 FAM74A4Q5TZK3 123 aa9.45□□□□□ -0.9
CAPN1-212ENST00000527887 SPANXN1Q5VSR9 72 aa9.45□□□□□ -0.9
CAPN1-212ENST00000527887 RPL36ALQ969Q0 106 aaKnown RBP9.45□□□□□ -0.9
CAPN1-212ENST00000527887 RMI2Q96E14 147 aa9.45□□□□□ -0.9
CAPN1-212ENST00000527887 TRBV7-3A0A075B6L6 115 aa9.44□□□□□ -0.9
CAPN1-212ENST00000527887 PPBPP02775 128 aa9.44□□□□□ -0.9
CAPN1-212ENST00000527887 Q0VG73 95 aa9.44□□□□□ -0.9
CAPN1-212ENST00000527887 FAM104BQ5XKR9 115 aa9.44□□□□□ -0.9
CAPN1-212ENST00000527887 Q9UF83 564 aa9.44□□□□□ -0.9
CAPN1-212ENST00000527887 SRRM2Q9UQ35 2752 aaKnown RBP9.44□□□□□ -0.9
CAPN1-212ENST00000527887 A0A087WWL8 130 aa9.43□□□□□ -0.9
CAPN1-212ENST00000527887 C5orf52A6NGY3 159 aa9.43□□□□□ -0.9
CAPN1-212ENST00000527887 FAM229AH3BQW9 127 aa9.43□□□□□ -0.9
CAPN1-212ENST00000527887 DAZ4Q86SG3 579 aaKnown RBP9.43□□□□□ -0.9
CAPN1-212ENST00000527887 NIT1Q86X76 327 aa9.43□□□□□ -0.9
CAPN1-212ENST00000527887 DAZ3Q9NR90 486 aaKnown RBP9.43□□□□□ -0.9
CAPN1-212ENST00000527887 A0A087WX48 190 aa9.42□□□□□ -0.9
CAPN1-212ENST00000527887 INAFM2P0DMQ5 153 aa9.42□□□□□ -0.9
CAPN1-212ENST00000527887 Q5VSD8 79 aa9.42□□□□□ -0.9
CAPN1-212ENST00000527887 OR10AG1Q8NH19 301 aa9.42□□□□□ -0.9
CAPN1-212ENST00000527887 ALKBH7Q9BT30 221 aaPredicted RBP9.42□□□□□ -0.9
CAPN1-212ENST00000527887 LAMTOR2Q9Y2Q5 125 aa9.42□□□□□ -0.9
CAPN1-212ENST00000527887 UBE2D3P61077 147 aa9.41□□□□□ -0.9
CAPN1-212ENST00000527887 UBE2D2P62837 147 aa9.41□□□□□ -0.9
CAPN1-212ENST00000527887 ESDP10768 282 aa9.4□□□□□ -0.9
CAPN1-212ENST00000527887 PKIAP61925 76 aa9.4□□□□□ -0.9
CAPN1-212ENST00000527887 Q8N3U1 123 aa9.4□□□□□ -0.9
CAPN1-212ENST00000527887 Q8N976 141 aa9.4□□□□□ -0.9
CAPN1-212ENST00000527887 AP1S3Q96PC3 154 aa9.4□□□□□ -0.9
CAPN1-212ENST00000527887 DNAH8Q96JB1 4490 aa9.4□□□□□ -0.9
CAPN1-212ENST00000527887 RAB4AP20338 218 aa9.39□□□□□ -0.91
CAPN1-212ENST00000527887 NDUFA6P56556 154 aa9.39□□□□□ -0.91
CAPN1-212ENST00000527887 TMEM97Q5BJF2 176 aa9.39□□□□□ -0.91
CAPN1-212ENST00000527887 ORMDL3Q8N138 153 aa9.39□□□□□ -0.91
CAPN1-212ENST00000527887 MRAP2Q96G30 205 aa9.39□□□□□ -0.91
CAPN1-212ENST00000527887 DPH3P1Q9H4G8 78 aa9.39□□□□□ -0.91
CAPN1-212ENST00000527887 TRBV6-8A0A0A6YYG3 113 aa9.38□□□□□ -0.91
CAPN1-212ENST00000527887 PPP1R17O96001 155 aa9.38□□□□□ -0.91
CAPN1-212ENST00000527887 SMR3BP02814 79 aaPredicted RBP9.38□□□□□ -0.91
CAPN1-212ENST00000527887 SNRPEP62304 92 aaKnown RBP9.38□□□□□ -0.91
CAPN1-212ENST00000527887 PACRGQ96M98 296 aaPredicted RBP9.38□□□□□ -0.91
CAPN1-212ENST00000527887 KLK12Q9UKR0 248 aa9.38□□□□□ -0.91
CAPN1-212ENST00000527887 IGKV2D-24A0A075B6R9 120 aa9.37□□□□□ -0.91
CAPN1-212ENST00000527887 LOC105371267A0A1B0GV96 52 aa9.37□□□□□ -0.91
CAPN1-212ENST00000527887 PRSS47A8MTI9 375 aa9.37□□□□□ -0.91
CAPN1-212ENST00000527887 SMIM17P0DL12 118 aa9.37□□□□□ -0.91
CAPN1-212ENST00000527887 ZNF56Q15929 161 aa9.37□□□□□ -0.91
CAPN1-212ENST00000527887 KIAA1644Q3SXP7 199 aa9.37□□□□□ -0.91
CAPN1-212ENST00000527887 MRPL51Q4U2R6 128 aaKnown RBP9.37□□□□□ -0.91
CAPN1-212ENST00000527887 Q6ZSA8 131 aa9.37□□□□□ -0.91
CAPN1-212ENST00000527887 AMN1Q8IY45 258 aa9.37□□□□□ -0.91
CAPN1-212ENST00000527887 C18orf32Q8TCD1 76 aa9.37□□□□□ -0.91
CAPN1-212ENST00000527887 RNF185Q96GF1 192 aa9.37□□□□□ -0.91
CAPN1-212ENST00000527887 KIF25-AS1Q9Y6Z4 181 aa9.37□□□□□ -0.91
CAPN1-212ENST00000527887 HERC1Q15751 4861 aa9.37□□□□□ -0.91
CAPN1-212ENST00000527887 MUC21A0A0G2JKD1 596 aa9.36□□□□□ -0.91
CAPN1-212ENST00000527887 MUC21A0A140T8X8 626 aa9.36□□□□□ -0.91
CAPN1-212ENST00000527887 TMEM262E9PQX1 116 aa9.36□□□□□ -0.91
CAPN1-212ENST00000527887 CKS2P33552 79 aa9.36□□□□□ -0.91
CAPN1-212ENST00000527887 WFDC2Q14508 124 aa9.36□□□□□ -0.91
CAPN1-212ENST00000527887 NEXN-AS1Q8NBZ9 246 aa9.36□□□□□ -0.91
CAPN1-212ENST00000527887 BAALCQ8WXS3 180 aa9.36□□□□□ -0.91
CAPN1-212ENST00000527887 UBE2WQ96B02 151 aa9.36□□□□□ -0.91
CAPN1-212ENST00000527887 C14orf177Q52M58 125 aa9.35□□□□□ -0.91
CAPN1-212ENST00000527887 BAGE3Q86Y29 109 aa9.35□□□□□ -0.91
CAPN1-212ENST00000527887 CHCHD1Q96BP2 118 aaKnown RBP9.35□□□□□ -0.91
CAPN1-212ENST00000527887 PRELID3AQ96N28 172 aa9.35□□□□□ -0.91
CAPN1-212ENST00000527887 FAM30AQ9NZY2 134 aa9.35□□□□□ -0.91
CAPN1-212ENST00000527887 DMBT1Q9UGM3 2413 aaPredicted RBP9.35□□□□□ -0.91
CAPN1-212ENST00000527887 D6R8Y8 96 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms