RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 E9PLD3 99 aa12.51□□□□□ -0.41
PCDHA6-202ENST00000527624 K7EP34 96 aa12.51□□□□□ -0.41
PCDHA6-202ENST00000527624 SPATA3Q8NHX4 192 aa12.51□□□□□ -0.41
PCDHA6-202ENST00000527624 TENM1Q9UKZ4 2725 aa12.51□□□□□ -0.41
PCDHA6-202ENST00000527624 MYMXA0A1B0GTQ4 84 aa12.5□□□□□ -0.41
PCDHA6-202ENST00000527624 Q9UF83 564 aa12.5□□□□□ -0.41
PCDHA6-202ENST00000527624 VWFP04275 2813 aa12.5□□□□□ -0.41
PCDHA6-202ENST00000527624 PCP4P48539 62 aa12.5□□□□□ -0.41
PCDHA6-202ENST00000527624 RIPPLY3P57055 190 aa12.5□□□□□ -0.41
PCDHA6-202ENST00000527624 PIK3CD-AS1Q5SR53 167 aa12.5□□□□□ -0.41
PCDHA6-202ENST00000527624 PHLDA1Q8WV24 401 aaPredicted RBP12.5□□□□□ -0.41
PCDHA6-202ENST00000527624 FAM110AQ9BQ89 295 aa12.5□□□□□ -0.41
PCDHA6-202ENST00000527624 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.49□□□□□ -0.41
PCDHA6-202ENST00000527624 PTH2Q96A98 100 aa12.49□□□□□ -0.41
PCDHA6-202ENST00000527624 TMEM141Q96I45 108 aa12.49□□□□□ -0.41
PCDHA6-202ENST00000527624 NHP2Q9NX24 153 aaKnown RBP12.49□□□□□ -0.41
PCDHA6-202ENST00000527624 SAMD5Q5TGI4 173 aa12.49□□□□□ -0.41
PCDHA6-202ENST00000527624 TIMM17AQ99595 171 aa12.49□□□□□ -0.41
PCDHA6-202ENST00000527624 PRADC1Q9BSG0 188 aa12.49□□□□□ -0.41
PCDHA6-202ENST00000527624 TRGV1A0A0A0MS02 117 aa12.48□□□□□ -0.41
PCDHA6-202ENST00000527624 K7ERJ3 54 aa12.48□□□□□ -0.41
PCDHA6-202ENST00000527624 PMVKQ15126 192 aa12.48□□□□□ -0.41
PCDHA6-202ENST00000527624 NACAE9PAV3 2078 aa12.48□□□□□ -0.41
PCDHA6-202ENST00000527624 IGLV4-69A0A075B6H9 119 aa12.47□□□□□ -0.41
PCDHA6-202ENST00000527624 I3L3M4 83 aa12.47□□□□□ -0.41
PCDHA6-202ENST00000527624 HIST1H4GQ99525 98 aa12.47□□□□□ -0.41
PCDHA6-202ENST00000527624 FABP2P12104 132 aa12.47□□□□□ -0.41
PCDHA6-202ENST00000527624 OCIAD2Q56VL3 154 aa12.47□□□□□ -0.41
PCDHA6-202ENST00000527624 PAPPA-AS1Q5QFB9 102 aa12.47□□□□□ -0.41
PCDHA6-202ENST00000527624 SPCS1Q9Y6A9 102 aa12.47□□□□□ -0.41
PCDHA6-202ENST00000527624 F8P00451 2351 aa12.47□□□□□ -0.41
PCDHA6-202ENST00000527624 ATRQ13535 2644 aa12.46□□□□□ -0.41
PCDHA6-202ENST00000527624 TRBV7-3A0A075B6L6 115 aa12.46□□□□□ -0.41
PCDHA6-202ENST00000527624 C11orf86A6NJI1 115 aa12.46□□□□□ -0.41
PCDHA6-202ENST00000527624 IL17DQ8TAD2 202 aa12.46□□□□□ -0.41
PCDHA6-202ENST00000527624 EDA2RQ9HAV5 297 aa12.46□□□□□ -0.41
PCDHA6-202ENST00000527624 TNFRSF18Q9Y5U5 241 aa12.46□□□□□ -0.41
PCDHA6-202ENST00000527624 RS1O15537 224 aa12.46□□□□□ -0.42
PCDHA6-202ENST00000527624 TMEM263Q8WUH6 116 aaKnown RBP12.46□□□□□ -0.42
PCDHA6-202ENST00000527624 RHODO00212 210 aa12.45□□□□□ -0.42
PCDHA6-202ENST00000527624 RHOHQ15669 191 aa12.45□□□□□ -0.42
PCDHA6-202ENST00000527624 Q6ZTI0 123 aa12.45□□□□□ -0.42
PCDHA6-202ENST00000527624 OR5A1Q8NGJ0 315 aa12.45□□□□□ -0.42
PCDHA6-202ENST00000527624 EMP1P54849 157 aa12.44□□□□□ -0.42
PCDHA6-202ENST00000527624 IGHV3-53P01767 116 aa12.43□□□□□ -0.42
PCDHA6-202ENST00000527624 C12orf74Q32Q52 190 aa12.43□□□□□ -0.42
PCDHA6-202ENST00000527624 NOP10Q9NPE3 64 aaKnown RBP12.43□□□□□ -0.42
PCDHA6-202ENST00000527624 ZNF815PA8K554 130 aa12.43□□□□□ -0.42
PCDHA6-202ENST00000527624 CSNK1G2-AS1Q8NCQ2 148 aa12.43□□□□□ -0.42
PCDHA6-202ENST00000527624 OPRPNQ99935 248 aaPredicted RBP12.43□□□□□ -0.42
PCDHA6-202ENST00000527624 C1QTNF4Q9BXJ3 329 aa12.43□□□□□ -0.42
PCDHA6-202ENST00000527624 C20orf203Q8NBC4 194 aa12.42□□□□□ -0.42
PCDHA6-202ENST00000527624 ZNF479Q96JC4 524 aa12.42□□□□□ -0.42
PCDHA6-202ENST00000527624 HERVK_113P61574 105 aa12.42□□□□□ -0.42
PCDHA6-202ENST00000527624 CITED1Q99966 193 aa12.41□□□□□ -0.42
PCDHA6-202ENST00000527624 IGHV3-38A0A0C4DH36 116 aa12.41□□□□□ -0.42
PCDHA6-202ENST00000527624 IGLL5B9A064 214 aa12.41□□□□□ -0.42
PCDHA6-202ENST00000527624 RNF151Q2KHN1 245 aa12.41□□□□□ -0.42
PCDHA6-202ENST00000527624 ZNRF2Q8NHG8 242 aa12.41□□□□□ -0.42
PCDHA6-202ENST00000527624 TEP1Q99973 2627 aaKnown RBP12.41□□□□□ -0.42
PCDHA6-202ENST00000527624 A0A1B0GWB2 263 aa12.4□□□□□ -0.42
PCDHA6-202ENST00000527624 PLAC8L1A1L4L8 177 aa12.4□□□□□ -0.42
PCDHA6-202ENST00000527624 SCGB1D4Q6XE38 83 aa12.4□□□□□ -0.42
PCDHA6-202ENST00000527624 K7ERU9 68 aa12.39□□□□□ -0.43
PCDHA6-202ENST00000527624 C9orf66Q5T8R8 295 aa12.39□□□□□ -0.43
PCDHA6-202ENST00000527624 PLEKHB2Q96CS7 222 aa12.39□□□□□ -0.43
PCDHA6-202ENST00000527624 C16orf74Q96GX8 76 aa12.39□□□□□ -0.43
PCDHA6-202ENST00000527624 RRN3P1Q2M238 152 aa12.39□□□□□ -0.43
PCDHA6-202ENST00000527624 TMEM170BQ5T4T1 132 aa12.39□□□□□ -0.43
PCDHA6-202ENST00000527624 INSL3P51460 131 aa12.38□□□□□ -0.43
PCDHA6-202ENST00000527624 DAZ2Q13117 558 aaKnown RBP12.38□□□□□ -0.43
PCDHA6-202ENST00000527624 NFE4Q86UQ8 179 aa12.38□□□□□ -0.43
PCDHA6-202ENST00000527624 GAGE7O76087 117 aa12.37□□□□□ -0.43
PCDHA6-202ENST00000527624 GAGE12FP0CL80 117 aa12.37□□□□□ -0.43
PCDHA6-202ENST00000527624 GAGE12GP0CL81 117 aa12.37□□□□□ -0.43
PCDHA6-202ENST00000527624 GAGE12IP0CL82 117 aa12.37□□□□□ -0.43
PCDHA6-202ENST00000527624 CEMP1Q6PRD7 247 aaPredicted RBP12.37□□□□□ -0.43
PCDHA6-202ENST00000527624 DNAJC30Q96LL9 226 aa12.37□□□□□ -0.43
PCDHA6-202ENST00000527624 MAST4O15021 2626 aa12.36□□□□□ -0.43
PCDHA6-202ENST00000527624 TRAV4A0A0B4J268 109 aa12.36□□□□□ -0.43
PCDHA6-202ENST00000527624 TRGV2A0A075B6R0 118 aa12.35□□□□□ -0.43
PCDHA6-202ENST00000527624 TSPEAR-AS2P59090 65 aa12.35□□□□□ -0.43
PCDHA6-202ENST00000527624 SRSF9Q13242 221 aaKnown RBP eCLIP12.35□□□□□ -0.43
PCDHA6-202ENST00000527624 IGLV4-3A0A075B6K6 122 aa12.35□□□□□ -0.43
PCDHA6-202ENST00000527624 A0A0J9YY99 117 aa12.35□□□□□ -0.43
PCDHA6-202ENST00000527624 CHCHD7Q9BUK0 85 aa12.35□□□□□ -0.43
PCDHA6-202ENST00000527624 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.34□□□□□ -0.43
PCDHA6-202ENST00000527624 IGKV2-29A2NJV5 120 aaPredicted RBP12.34□□□□□ -0.43
PCDHA6-202ENST00000527624 TMEM238LA0A1B0GVL6 79 aa12.34□□□□□ -0.43
PCDHA6-202ENST00000527624 A6NJY4 79 aa12.34□□□□□ -0.43
PCDHA6-202ENST00000527624 K7EQD1 137 aa12.34□□□□□ -0.43
PCDHA6-202ENST00000527624 COTL1Q14019 142 aa12.34□□□□□ -0.43
PCDHA6-202ENST00000527624 SLC25A29Q8N8R3 303 aa12.34□□□□□ -0.43
PCDHA6-202ENST00000527624 VPS25Q9BRG1 176 aa12.34□□□□□ -0.43
PCDHA6-202ENST00000527624 TRRAPQ9Y4A5 3859 aa12.33□□□□□ -0.44
PCDHA6-202ENST00000527624 AMELXQ99217 191 aa12.33□□□□□ -0.44
PCDHA6-202ENST00000527624 VCX2Q9H322 139 aa12.33□□□□□ -0.44
PCDHA6-202ENST00000527624 J3QQQ9 107 aa12.33□□□□□ -0.44
PCDHA6-202ENST00000527624 RNASE13Q5GAN3 156 aaKnown RBP12.33□□□□□ -0.44
PCDHA6-202ENST00000527624 PYGO1Q9Y3Y4 419 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms