RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 SMCO4Q9NRQ5 59 aa7.26□□□□□ -1.25
NEDD8-205ENST00000527046 TRAV8-6A0A0B4J262 113 aa7.25□□□□□ -1.25
NEDD8-205ENST00000527046 VCYO14598 125 aa7.25□□□□□ -1.25
NEDD8-205ENST00000527046 RTL8CO15255 209 aa7.25□□□□□ -1.25
NEDD8-205ENST00000527046 IGHV3-30P01768 117 aa7.25□□□□□ -1.25
NEDD8-205ENST00000527046 IGHV3-33P01772 117 aa7.25□□□□□ -1.25
NEDD8-205ENST00000527046 HLA-DQA1P01909 254 aa7.25□□□□□ -1.25
NEDD8-205ENST00000527046 APCSP02743 223 aa7.25□□□□□ -1.25
NEDD8-205ENST00000527046 IGHV3-30-3P0DP02 117 aa7.25□□□□□ -1.25
NEDD8-205ENST00000527046 IGHV3-30-5P0DP03 117 aa7.25□□□□□ -1.25
NEDD8-205ENST00000527046 FAM104AQ969W3 186 aa7.25□□□□□ -1.25
NEDD8-205ENST00000527046 MRPL18Q9H0U6 180 aaKnown RBP7.25□□□□□ -1.25
NEDD8-205ENST00000527046 IGHV1-24A0A0C4DH33 117 aa7.24□□□□□ -1.25
NEDD8-205ENST00000527046 IBA57-AS1B1ANH7 110 aa7.24□□□□□ -1.25
NEDD8-205ENST00000527046 PPP1R17O96001 155 aa7.24□□□□□ -1.25
NEDD8-205ENST00000527046 PMCHP20382 165 aa7.24□□□□□ -1.25
NEDD8-205ENST00000527046 COTL1Q14019 142 aa7.24□□□□□ -1.25
NEDD8-205ENST00000527046 COX19Q49B96 90 aa7.24□□□□□ -1.25
NEDD8-205ENST00000527046 MPV17L2Q567V2 206 aa7.24□□□□□ -1.25
NEDD8-205ENST00000527046 TMEM97Q5BJF2 176 aa7.24□□□□□ -1.25
NEDD8-205ENST00000527046 Q6ZRN7 208 aaPredicted RBP7.24□□□□□ -1.25
NEDD8-205ENST00000527046 Q8N976 141 aa7.24□□□□□ -1.25
NEDD8-205ENST00000527046 SMIM2Q9BVW6 85 aa7.24□□□□□ -1.25
NEDD8-205ENST00000527046 DNAH6Q9C0G6 4158 aa7.23□□□□□ -1.25
NEDD8-205ENST00000527046 IGLV4-60A0A075B6I1 120 aa7.23□□□□□ -1.25
NEDD8-205ENST00000527046 TRBV25-1A0A075B6N4 114 aa7.23□□□□□ -1.25
NEDD8-205ENST00000527046 ATP6V1G1O75348 118 aa7.23□□□□□ -1.25
NEDD8-205ENST00000527046 GAGE6Q13070 117 aa7.23□□□□□ -1.25
NEDD8-205ENST00000527046 C20orf203Q8NBC4 194 aa7.23□□□□□ -1.25
NEDD8-205ENST00000527046 URB1-AS1Q96HZ7 61 aa7.23□□□□□ -1.25
NEDD8-205ENST00000527046 LAMTOR2Q9Y2Q5 125 aa7.23□□□□□ -1.25
NEDD8-205ENST00000527046 DNAH2Q9P225 4427 aa7.23□□□□□ -1.25
NEDD8-205ENST00000527046 LINC01546A6NGU7 62 aa7.22□□□□□ -1.25
NEDD8-205ENST00000527046 TCAPO15273 167 aa7.22□□□□□ -1.25
NEDD8-205ENST00000527046 MT-ND6P03923 174 aa7.22□□□□□ -1.25
NEDD8-205ENST00000527046 AMTP48728 403 aa7.22□□□□□ -1.25
NEDD8-205ENST00000527046 RBX1P62877 108 aa7.22□□□□□ -1.25
NEDD8-205ENST00000527046 FABP9Q0Z7S8 132 aa7.22□□□□□ -1.25
NEDD8-205ENST00000527046 ENHOQ6UWT2 76 aa7.22□□□□□ -1.25
NEDD8-205ENST00000527046 TMEM243Q9BU79 118 aa7.22□□□□□ -1.25
NEDD8-205ENST00000527046 TRAPPC1Q9Y5R8 145 aa7.22□□□□□ -1.25
NEDD8-205ENST00000527046 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.21□□□□□ -1.26
NEDD8-205ENST00000527046 LOC389332A0A1B0GUA5 103 aa7.21□□□□□ -1.26
NEDD8-205ENST00000527046 A0A1B0GUV1 79 aa7.21□□□□□ -1.26
NEDD8-205ENST00000527046 IGKV2-29A2NJV5 120 aaPredicted RBP7.21□□□□□ -1.26
NEDD8-205ENST00000527046 K7EP13 123 aa7.21□□□□□ -1.26
NEDD8-205ENST00000527046 IFI27P40305 119 aaPredicted RBP7.21□□□□□ -1.26
NEDD8-205ENST00000527046 Q8N8P6 123 aa7.21□□□□□ -1.26
NEDD8-205ENST00000527046 CHCHD5Q9BSY4 110 aa7.21□□□□□ -1.26
NEDD8-205ENST00000527046 TMEM262E9PQX1 116 aa7.2□□□□□ -1.26
NEDD8-205ENST00000527046 KRTAP26-1Q6PEX3 210 aa7.2□□□□□ -1.26
NEDD8-205ENST00000527046 MAPKAPK5-AS1Q8N8E1 139 aa7.2□□□□□ -1.26
NEDD8-205ENST00000527046 PRR34Q9NV39 138 aa7.2□□□□□ -1.26
NEDD8-205ENST00000527046 KLK12Q9UKR0 248 aa7.2□□□□□ -1.26
NEDD8-205ENST00000527046 DNAH17Q9UFH2 4485 aa7.2□□□□□ -1.26
NEDD8-205ENST00000527046 DNAH10Q8IVF4 4471 aa7.19□□□□□ -1.26
NEDD8-205ENST00000527046 H7C423 109 aa7.19□□□□□ -1.26
NEDD8-205ENST00000527046 FGF6P10767 208 aa7.19□□□□□ -1.26
NEDD8-205ENST00000527046 BTF3P20290 206 aaKnown RBP7.19□□□□□ -1.26
NEDD8-205ENST00000527046 S100A1P23297 94 aa7.19□□□□□ -1.26
NEDD8-205ENST00000527046 TTC32Q5I0X7 151 aa7.19□□□□□ -1.26
NEDD8-205ENST00000527046 C1orf134Q5TEV5 83 aa7.19□□□□□ -1.26
NEDD8-205ENST00000527046 MRPL52Q86TS9 123 aaKnown RBP7.19□□□□□ -1.26
NEDD8-205ENST00000527046 C6orf223Q8N319 242 aa7.19□□□□□ -1.26
NEDD8-205ENST00000527046 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.19□□□□□ -1.26
NEDD8-205ENST00000527046 C18orf32Q8TCD1 76 aa7.19□□□□□ -1.26
NEDD8-205ENST00000527046 TRAV9-2A0A087WT02 112 aa7.18□□□□□ -1.26
NEDD8-205ENST00000527046 TRGC2P03986 189 aa7.18□□□□□ -1.26
NEDD8-205ENST00000527046 RAB5AP20339 215 aa7.18□□□□□ -1.26
NEDD8-205ENST00000527046 RPL39P62891 51 aaKnown RBP7.18□□□□□ -1.26
NEDD8-205ENST00000527046 KIR2DL4Q99706 377 aa7.18□□□□□ -1.26
NEDD8-205ENST00000527046 MAP1LC3AQ9H492 121 aa7.18□□□□□ -1.26
NEDD8-205ENST00000527046 UBE2D4Q9Y2X8 147 aa7.18□□□□□ -1.26
NEDD8-205ENST00000527046 A0A087WX48 190 aa7.17□□□□□ -1.26
NEDD8-205ENST00000527046 TNP2Q05952 138 aa7.17□□□□□ -1.26
NEDD8-205ENST00000527046 LAGE3Q14657 143 aa7.17□□□□□ -1.26
NEDD8-205ENST00000527046 LINC00269Q8N2A0 174 aa7.17□□□□□ -1.26
NEDD8-205ENST00000527046 C10orf126Q8N4M7 172 aa7.17□□□□□ -1.26
NEDD8-205ENST00000527046 OPRPNQ99935 248 aaPredicted RBP7.17□□□□□ -1.26
NEDD8-205ENST00000527046 CDC42SE2Q9NRR3 84 aa7.17□□□□□ -1.26
NEDD8-205ENST00000527046 CSDC2Q9Y534 153 aaKnown RBP7.17□□□□□ -1.26
NEDD8-205ENST00000527046 A0A096LNJ9 63 aa7.16□□□□□ -1.26
NEDD8-205ENST00000527046 A0A1B0GVY2 172 aa7.16□□□□□ -1.26
NEDD8-205ENST00000527046 FCER1GP30273 86 aa7.16□□□□□ -1.26
NEDD8-205ENST00000527046 LINC00310P59036 64 aa7.16□□□□□ -1.26
NEDD8-205ENST00000527046 TIMM21Q9BVV7 248 aa7.16□□□□□ -1.26
NEDD8-205ENST00000527046 NXT2Q9NPJ8 142 aaKnown RBP7.16□□□□□ -1.26
NEDD8-205ENST00000527046 LRCOL1A6NCL2 159 aa7.15□□□□□ -1.26
NEDD8-205ENST00000527046 ANGP03950 147 aaKnown RBP7.15□□□□□ -1.26
NEDD8-205ENST00000527046 UBE2WQ96B02 151 aa7.15□□□□□ -1.26
NEDD8-205ENST00000527046 FAT2Q9NYQ8 4349 aa7.15□□□□□ -1.27
NEDD8-205ENST00000527046 IGIPA6NJ69 53 aa7.14□□□□□ -1.27
NEDD8-205ENST00000527046 K7EMI3 77 aa7.14□□□□□ -1.27
NEDD8-205ENST00000527046 UBE2L6O14933 153 aa7.14□□□□□ -1.27
NEDD8-205ENST00000527046 ZNF25P17030 456 aaPredicted RBP7.14□□□□□ -1.27
NEDD8-205ENST00000527046 PKIAP61925 76 aa7.14□□□□□ -1.27
NEDD8-205ENST00000527046 REG3AQ06141 175 aa7.14□□□□□ -1.27
NEDD8-205ENST00000527046 WFDC2Q14508 124 aa7.14□□□□□ -1.27
NEDD8-205ENST00000527046 CLPSL2Q6UWE3 100 aa7.14□□□□□ -1.27
NEDD8-205ENST00000527046 PRSS3P2Q8NHM4 247 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms