RNA–Protein interactions for RNA: ENST00000525936.1

EXOSC4-202, Transcript of exosome component 4, humanhuman

TSL 3 BASIC

Gene EXOSC4, Length 606 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-202ENST00000525936 HBBP68871 147 aa13.14□□□□□ -0.31
EXOSC4-202ENST00000525936 MRPL51Q4U2R6 128 aaKnown RBP13.14□□□□□ -0.31
EXOSC4-202ENST00000525936 COMMD7Q86VX2 200 aa13.14□□□□□ -0.31
EXOSC4-202ENST00000525936 MAPKAPK5-AS1Q8N8E1 139 aa13.14□□□□□ -0.31
EXOSC4-202ENST00000525936 NRACQ8N912 160 aa13.14□□□□□ -0.31
EXOSC4-202ENST00000525936 DEFB104AQ8WTQ1 72 aa13.14□□□□□ -0.31
EXOSC4-202ENST00000525936 TMEM70Q9BUB7 260 aa13.14□□□□□ -0.31
EXOSC4-202ENST00000525936 SEC11CQ9BY50 192 aa13.14□□□□□ -0.31
EXOSC4-202ENST00000525936 PRR34Q9NV39 138 aa13.14□□□□□ -0.31
EXOSC4-202ENST00000525936 F8W036 122 aa13.13□□□□□ -0.31
EXOSC4-202ENST00000525936 I3L3M4 83 aa13.13□□□□□ -0.31
EXOSC4-202ENST00000525936 EREGO14944 169 aa13.13□□□□□ -0.31
EXOSC4-202ENST00000525936 PSCAO43653 123 aa13.13□□□□□ -0.31
EXOSC4-202ENST00000525936 Q0VG73 95 aa13.13□□□□□ -0.31
EXOSC4-202ENST00000525936 MRPL54Q6P161 138 aaKnown RBP13.13□□□□□ -0.31
EXOSC4-202ENST00000525936 ATP5L2Q7Z4Y8 100 aa13.13□□□□□ -0.31
EXOSC4-202ENST00000525936 UBE2WQ96B02 151 aa13.13□□□□□ -0.31
EXOSC4-202ENST00000525936 ST20Q9HBF5 79 aa13.13□□□□□ -0.31
EXOSC4-202ENST00000525936 PGPEP1Q9NXJ5 209 aa13.13□□□□□ -0.31
EXOSC4-202ENST00000525936 COX11Q9Y6N1 276 aa13.13□□□□□ -0.31
EXOSC4-202ENST00000525936 TRBV27A0A0K0K1C4 114 aa13.12□□□□□ -0.31
EXOSC4-202ENST00000525936 SMKR1H3BMG3 65 aa13.12□□□□□ -0.31
EXOSC4-202ENST00000525936 S100A8P05109 93 aa13.12□□□□□ -0.31
EXOSC4-202ENST00000525936 AMTP48728 403 aa13.12□□□□□ -0.31
EXOSC4-202ENST00000525936 C10orf91Q5T1B1 145 aa13.12□□□□□ -0.31
EXOSC4-202ENST00000525936 C16orf90A8MZG2 172 aa13.11□□□□□ -0.31
EXOSC4-202ENST00000525936 PPP1R17O96001 155 aa13.11□□□□□ -0.31
EXOSC4-202ENST00000525936 ANGP03950 147 aaKnown RBP13.11□□□□□ -0.31
EXOSC4-202ENST00000525936 C20orf203Q8NBC4 194 aa13.11□□□□□ -0.31
EXOSC4-202ENST00000525936 RMI2Q96E14 147 aa13.11□□□□□ -0.31
EXOSC4-202ENST00000525936 TRBV24-1A0A075B6N3 115 aa13.1□□□□□ -0.31
EXOSC4-202ENST00000525936 TSHBP01222 138 aa13.1□□□□□ -0.31
EXOSC4-202ENST00000525936 HERC2O95714 4834 aa13.09□□□□□ -0.31
EXOSC4-202ENST00000525936 PMCHP20382 165 aa13.09□□□□□ -0.31
EXOSC4-202ENST00000525936 LINC00269Q8N2A0 174 aa13.09□□□□□ -0.31
EXOSC4-202ENST00000525936 IMMP2LQ96T52 175 aa13.09□□□□□ -0.31
EXOSC4-202ENST00000525936 IGLV4-60A0A075B6I1 120 aa13.08□□□□□ -0.32
EXOSC4-202ENST00000525936 IGKV2D-24A0A075B6R9 120 aa13.08□□□□□ -0.32
EXOSC4-202ENST00000525936 H7C423 109 aa13.08□□□□□ -0.32
EXOSC4-202ENST00000525936 ESDP10768 282 aa13.08□□□□□ -0.32
EXOSC4-202ENST00000525936 SUMO2P61956 95 aaKnown RBP13.08□□□□□ -0.32
EXOSC4-202ENST00000525936 WFDC2Q14508 124 aa13.08□□□□□ -0.32
EXOSC4-202ENST00000525936 MIAQ16674 131 aa13.08□□□□□ -0.32
EXOSC4-202ENST00000525936 CDPF1Q6NVV7 123 aa13.08□□□□□ -0.32
EXOSC4-202ENST00000525936 VCYO14598 125 aa13.07□□□□□ -0.32
EXOSC4-202ENST00000525936 APCSP02743 223 aa13.07□□□□□ -0.32
EXOSC4-202ENST00000525936 Q8N814 137 aa13.07□□□□□ -0.32
EXOSC4-202ENST00000525936 CTDSP1Q9GZU7 261 aa13.07□□□□□ -0.32
EXOSC4-202ENST00000525936 UBE2L6O14933 153 aa13.06□□□□□ -0.32
EXOSC4-202ENST00000525936 CRPP02741 224 aa13.06□□□□□ -0.32
EXOSC4-202ENST00000525936 CKS2P33552 79 aa13.06□□□□□ -0.32
EXOSC4-202ENST00000525936 RPL32P62910 135 aaKnown RBP13.06□□□□□ -0.32
EXOSC4-202ENST00000525936 KRTAP26-1Q6PEX3 210 aa13.06□□□□□ -0.32
EXOSC4-202ENST00000525936 BTF3L4Q96K17 158 aa13.06□□□□□ -0.32
EXOSC4-202ENST00000525936 C20orf78Q9BR46 151 aa13.06□□□□□ -0.32
EXOSC4-202ENST00000525936 CARHSP1Q9Y2V2 147 aaKnown RBP13.06□□□□□ -0.32
EXOSC4-202ENST00000525936 PPBPP02775 128 aa13.05□□□□□ -0.32
EXOSC4-202ENST00000525936 FUSP35637 526 aaKnown RBP eCLIP13.05□□□□□ -0.32
EXOSC4-202ENST00000525936 REG3AQ06141 175 aa13.05□□□□□ -0.32
EXOSC4-202ENST00000525936 C1orf43Q9BWL3 253 aa13.05□□□□□ -0.32
EXOSC4-202ENST00000525936 TMEM242Q9NWH2 141 aa13.05□□□□□ -0.32
EXOSC4-202ENST00000525936 APOBP04114 4563 aaKnown RBP13.05□□□□□ -0.32
EXOSC4-202ENST00000525936 RYR1P21817 5038 aa13.04□□□□□ -0.32
EXOSC4-202ENST00000525936 NTN5Q8WTR8 489 aaPredicted RBP13.04□□□□□ -0.32
EXOSC4-202ENST00000525936 BAALCQ8WXS3 180 aa13.04□□□□□ -0.32
EXOSC4-202ENST00000525936 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.03□□□□□ -0.32
EXOSC4-202ENST00000525936 IGKV2-29A2NJV5 120 aaPredicted RBP13.03□□□□□ -0.32
EXOSC4-202ENST00000525936 D6R8Y8 96 aa13.03□□□□□ -0.32
EXOSC4-202ENST00000525936 PHOX2AO14813 284 aa13.03□□□□□ -0.32
EXOSC4-202ENST00000525936 TNFRSF6BO95407 300 aa13.03□□□□□ -0.32
EXOSC4-202ENST00000525936 HSPG2P98160 4391 aa13.02□□□□□ -0.32
EXOSC4-202ENST00000525936 FGF6P10767 208 aa13.02□□□□□ -0.33
EXOSC4-202ENST00000525936 CLPSL2Q6UWE3 100 aa13.02□□□□□ -0.33
EXOSC4-202ENST00000525936 TRAV8-4A0A0B4J246 113 aa13.01□□□□□ -0.33
EXOSC4-202ENST00000525936 CDK2AP2O75956 126 aa13.01□□□□□ -0.33
EXOSC4-202ENST00000525936 MRPL52Q86TS9 123 aaKnown RBP13.01□□□□□ -0.33
EXOSC4-202ENST00000525936 TRAV9-1A0A075B6T8 112 aa13□□□□□ -0.33
EXOSC4-202ENST00000525936 C7orf77A4D0Y5 90 aa13□□□□□ -0.33
EXOSC4-202ENST00000525936 LECT2O14960 151 aa13□□□□□ -0.33
EXOSC4-202ENST00000525936 NPYP01303 97 aa13□□□□□ -0.33
EXOSC4-202ENST00000525936 ZNF25P17030 456 aaPredicted RBP13□□□□□ -0.33
EXOSC4-202ENST00000525936 TMEM136Q6ZRR5 245 aa13□□□□□ -0.33
EXOSC4-202ENST00000525936 ORMDL3Q8N138 153 aa13□□□□□ -0.33
EXOSC4-202ENST00000525936 KIR2DL4Q99706 377 aa13□□□□□ -0.33
EXOSC4-202ENST00000525936 AMMECR1LQ6DCA0 310 aa12.99□□□□□ -0.33
EXOSC4-202ENST00000525936 CLRN3Q8NCR9 226 aa12.99□□□□□ -0.33
EXOSC4-202ENST00000525936 PRSS47A8MTI9 375 aa12.98□□□□□ -0.33
EXOSC4-202ENST00000525936 RHEBQ15382 184 aa12.98□□□□□ -0.33
EXOSC4-202ENST00000525936 SMIM2Q9BVW6 85 aa12.98□□□□□ -0.33
EXOSC4-202ENST00000525936 IGLV5-52A0A0A0MRZ9 124 aa12.97□□□□□ -0.33
EXOSC4-202ENST00000525936 FCER1GP30273 86 aa12.97□□□□□ -0.33
EXOSC4-202ENST00000525936 KRTAP10-1P60331 282 aa12.97□□□□□ -0.33
EXOSC4-202ENST00000525936 RNASEKQ6P5S7 137 aaKnown RBP12.97□□□□□ -0.33
EXOSC4-202ENST00000525936 PRELID3AQ96N28 172 aa12.97□□□□□ -0.33
EXOSC4-202ENST00000525936 LAMTOR2Q9Y2Q5 125 aa12.97□□□□□ -0.33
EXOSC4-202ENST00000525936 IGLV10-54A0A075B6I4 117 aa12.96□□□□□ -0.33
EXOSC4-202ENST00000525936 TCAPO15273 167 aa12.96□□□□□ -0.33
EXOSC4-202ENST00000525936 GCSHP23434 173 aa12.96□□□□□ -0.33
EXOSC4-202ENST00000525936 CDC42SE2Q9NRR3 84 aa12.96□□□□□ -0.33
EXOSC4-202ENST00000525936 CSDC2Q9Y534 153 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms