RNA–Protein interactions for RNA: ENST00000525913.1

SSH3-204, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2

Gene SSH3, Length 264 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-204ENST00000525913 ZFP30Q9Y2G7 519 aa4.06□□□□□ -1.76
SSH3-204ENST00000525913 HSPB11Q9Y547 144 aa4.06□□□□□ -1.76
SSH3-204ENST00000525913 IGLV4-69A0A075B6H9 119 aa4.05□□□□□ -1.76
SSH3-204ENST00000525913 IGLV7-46A0A075B6I9 117 aa4.05□□□□□ -1.76
SSH3-204ENST00000525913 FAM168BA1KXE4 195 aa4.05□□□□□ -1.76
SSH3-204ENST00000525913 CENPXA8MT69 81 aa4.05□□□□□ -1.76
SSH3-204ENST00000525913 PEX7O00628 323 aa4.05□□□□□ -1.76
SSH3-204ENST00000525913 UBE2L6O14933 153 aa4.05□□□□□ -1.76
SSH3-204ENST00000525913 CXCL1P09341 107 aa4.05□□□□□ -1.76
SSH3-204ENST00000525913 OR5AL1P0C617 328 aa4.05□□□□□ -1.76
SSH3-204ENST00000525913 CRYGAP11844 174 aa4.05□□□□□ -1.76
SSH3-204ENST00000525913 CDC34P49427 236 aaPredicted RBP4.05□□□□□ -1.76
SSH3-204ENST00000525913 NKX2-5P52952 324 aaPredicted RBP4.05□□□□□ -1.76
SSH3-204ENST00000525913 DEFA3P59666 94 aa4.05□□□□□ -1.76
SSH3-204ENST00000525913 KRTAP19-2Q3LHN2 52 aa4.05□□□□□ -1.76
SSH3-204ENST00000525913 LRRC37A5PQ49AS3 106 aa4.05□□□□□ -1.76
SSH3-204ENST00000525913 SUMO4Q6EEV6 95 aa4.05□□□□□ -1.76
SSH3-204ENST00000525913 MLST8Q9BVC4 326 aa4.05□□□□□ -1.76
SSH3-204ENST00000525913 TMEM167BQ9NRX6 74 aa4.05□□□□□ -1.76
SSH3-204ENST00000525913 LINC00959A0A1B0GUT2 108 aa4.04□□□□□ -1.76
SSH3-204ENST00000525913 A6NHS1 94 aa4.04□□□□□ -1.76
SSH3-204ENST00000525913 ZNF561-AS1K7EIQ3 104 aa4.04□□□□□ -1.76
SSH3-204ENST00000525913 CCL25O15444 150 aa4.04□□□□□ -1.76
SSH3-204ENST00000525913 APOMO95445 188 aa4.04□□□□□ -1.76
SSH3-204ENST00000525913 XCL1P47992 114 aa4.04□□□□□ -1.76
SSH3-204ENST00000525913 CAMPP49913 170 aa4.04□□□□□ -1.76
SSH3-204ENST00000525913 SSTP61278 116 aa4.04□□□□□ -1.76
SSH3-204ENST00000525913 ASB16-AS1Q495Z4 193 aa4.04□□□□□ -1.76
SSH3-204ENST00000525913 TRIQKQ629K1 86 aa4.04□□□□□ -1.76
SSH3-204ENST00000525913 OR5A1Q8NGJ0 315 aa4.04□□□□□ -1.76
SSH3-204ENST00000525913 CXorf1O96002 111 aa4.03□□□□□ -1.76
SSH3-204ENST00000525913 LTAP01374 205 aa4.03□□□□□ -1.76
SSH3-204ENST00000525913 IL7P13232 177 aa4.03□□□□□ -1.76
SSH3-204ENST00000525913 S100A5P33763 92 aa4.03□□□□□ -1.76
SSH3-204ENST00000525913 MT1HP80294 61 aa4.03□□□□□ -1.76
SSH3-204ENST00000525913 SPANXN1Q5VSR9 72 aa4.03□□□□□ -1.76
SSH3-204ENST00000525913 RASL11AQ6T310 242 aa4.03□□□□□ -1.76
SSH3-204ENST00000525913 HIST1H2BAQ96A08 127 aa4.03□□□□□ -1.76
SSH3-204ENST00000525913 OPRPNQ99935 248 aaPredicted RBP4.03□□□□□ -1.76
SSH3-204ENST00000525913 NIT2Q9NQR4 276 aa4.03□□□□□ -1.76
SSH3-204ENST00000525913 NUDT15Q9NV35 164 aa4.03□□□□□ -1.76
SSH3-204ENST00000525913 FAM74A7A6NL05 159 aa4.02□□□□□ -1.77
SSH3-204ENST00000525913 LYRM1O43325 122 aa4.02□□□□□ -1.77
SSH3-204ENST00000525913 ZNF861PO60384 105 aa4.02□□□□□ -1.77
SSH3-204ENST00000525913 H2AFB2P0C5Z0 115 aa4.02□□□□□ -1.77
SSH3-204ENST00000525913 SMIM17P0DL12 118 aa4.02□□□□□ -1.77
SSH3-204ENST00000525913 COTL1Q14019 142 aa4.02□□□□□ -1.77
SSH3-204ENST00000525913 CD164L2Q6UWJ8 174 aa4.02□□□□□ -1.77
SSH3-204ENST00000525913 TYMSOSQ8TAI1 123 aa4.02□□□□□ -1.77
SSH3-204ENST00000525913 ISOC2Q96AB3 205 aa4.02□□□□□ -1.77
SSH3-204ENST00000525913 SSPOA2VEC9 5147 aa4.02□□□□□ -1.77
SSH3-204ENST00000525913 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.01□□□□□ -1.77
SSH3-204ENST00000525913 IGKV2-29A2NJV5 120 aaPredicted RBP4.01□□□□□ -1.77
SSH3-204ENST00000525913 H7C423 109 aa4.01□□□□□ -1.77
SSH3-204ENST00000525913 NTF3P20783 257 aa4.01□□□□□ -1.77
SSH3-204ENST00000525913 ATP6V0CP27449 155 aa4.01□□□□□ -1.77
SSH3-204ENST00000525913 UBE2G2P60604 165 aa4.01□□□□□ -1.77
SSH3-204ENST00000525913 RPL18AQ02543 176 aaKnown RBP4.01□□□□□ -1.77
SSH3-204ENST00000525913 ZNF726P1Q15940 193 aa4.01□□□□□ -1.77
SSH3-204ENST00000525913 RNF151Q2KHN1 245 aa4.01□□□□□ -1.77
SSH3-204ENST00000525913 KRTAP13-2Q52LG2 175 aa4.01□□□□□ -1.77
SSH3-204ENST00000525913 RNASEKQ6P5S7 137 aaKnown RBP4.01□□□□□ -1.77
SSH3-204ENST00000525913 Q6ZNX1 250 aa4.01□□□□□ -1.77
SSH3-204ENST00000525913 TSKUQ8WUA8 353 aa4.01□□□□□ -1.77
SSH3-204ENST00000525913 PPP1R1CQ8WVI7 109 aa4.01□□□□□ -1.77
SSH3-204ENST00000525913 FMC1Q96HJ9 113 aa4.01□□□□□ -1.77
SSH3-204ENST00000525913 C2orf48Q96LS8 159 aa4.01□□□□□ -1.77
SSH3-204ENST00000525913 AP1S3Q96PC3 154 aa4.01□□□□□ -1.77
SSH3-204ENST00000525913 CAMK2N2Q96S95 79 aa4.01□□□□□ -1.77
SSH3-204ENST00000525913 PPDPFQ9H3Y8 114 aa4.01□□□□□ -1.77
SSH3-204ENST00000525913 BCL2L11O43521 198 aa4□□□□□ -1.77
SSH3-204ENST00000525913 MPC2O95563 127 aa4□□□□□ -1.77
SSH3-204ENST00000525913 MGPP08493 103 aa4□□□□□ -1.77
SSH3-204ENST00000525913 ESDP10768 282 aa4□□□□□ -1.77
SSH3-204ENST00000525913 H2BFSP57053 126 aa4□□□□□ -1.77
SSH3-204ENST00000525913 KRTAP10-6P60371 365 aaPredicted RBP4□□□□□ -1.77
SSH3-204ENST00000525913 SS18Q15532 418 aa4□□□□□ -1.77
SSH3-204ENST00000525913 LCE1DQ5T752 114 aa4□□□□□ -1.77
SSH3-204ENST00000525913 AMMECR1LQ6DCA0 310 aa4□□□□□ -1.77
SSH3-204ENST00000525913 LINC00173Q6ZV60 143 aa4□□□□□ -1.77
SSH3-204ENST00000525913 ACTR3CQ9C0K3 210 aaPredicted RBP4□□□□□ -1.77
SSH3-204ENST00000525913 C19orf71A6NCJ1 209 aa3.99□□□□□ -1.77
SSH3-204ENST00000525913 TLX1NBP0CAT3 122 aa3.99□□□□□ -1.77
SSH3-204ENST00000525913 IGLC6P0CF74 106 aa3.99□□□□□ -1.77
SSH3-204ENST00000525913 UBE2G1P62253 170 aa3.99□□□□□ -1.77
SSH3-204ENST00000525913 EIF5AL1Q6IS14 154 aaKnown RBP3.99□□□□□ -1.77
SSH3-204ENST00000525913 PSMG3Q9BT73 122 aaPredicted RBP3.99□□□□□ -1.77
SSH3-204ENST00000525913 NKX6-2Q9C056 277 aaPredicted RBP3.99□□□□□ -1.77
SSH3-204ENST00000525913 CDC42SE2Q9NRR3 84 aa3.99□□□□□ -1.77
SSH3-204ENST00000525913 ANAPC11Q9NYG5 84 aa3.99□□□□□ -1.77
SSH3-204ENST00000525913 TNFSF18Q9UNG2 199 aa3.99□□□□□ -1.77
SSH3-204ENST00000525913 FLGP20930 4061 aaPredicted RBP3.99□□□□□ -1.77
SSH3-204ENST00000525913 USH2AO75445 5202 aa3.99□□□□□ -1.77
SSH3-204ENST00000525913 G3V3Q6 166 aa3.98□□□□□ -1.77
SSH3-204ENST00000525913 NCR2O95944 276 aa3.98□□□□□ -1.77
SSH3-204ENST00000525913 TSHBP01222 138 aa3.98□□□□□ -1.77
SSH3-204ENST00000525913 MBP02144 154 aa3.98□□□□□ -1.77
SSH3-204ENST00000525913 CFC1BP0CG36 223 aa3.98□□□□□ -1.77
SSH3-204ENST00000525913 ZNF25P17030 456 aaPredicted RBP3.98□□□□□ -1.77
SSH3-204ENST00000525913 SERF2P84101 59 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms