RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 VPS13BQ7Z7G8 4022 aa7.58□□□□□ -1.2
HIF3A-209ENST00000525854 DNAH8Q96JB1 4490 aa7.57□□□□□ -1.2
HIF3A-209ENST00000525854 SRRM2Q9UQ35 2752 aaKnown RBP7.57□□□□□ -1.2
HIF3A-209ENST00000525854 TRAV8-4A0A0B4J246 113 aa7.57□□□□□ -1.2
HIF3A-209ENST00000525854 UBE2L6O14933 153 aa7.57□□□□□ -1.2
HIF3A-209ENST00000525854 AMTP48728 403 aa7.57□□□□□ -1.2
HIF3A-209ENST00000525854 LYPD6BQ8NI32 183 aa7.57□□□□□ -1.2
HIF3A-209ENST00000525854 A8MWL6 223 aa7.56□□□□□ -1.2
HIF3A-209ENST00000525854 GATCO43716 136 aaKnown RBP7.56□□□□□ -1.2
HIF3A-209ENST00000525854 PEA15Q15121 130 aa7.56□□□□□ -1.2
HIF3A-209ENST00000525854 KRTAP26-1Q6PEX3 210 aa7.56□□□□□ -1.2
HIF3A-209ENST00000525854 FAM231DQ6ZW35 169 aa7.56□□□□□ -1.2
HIF3A-209ENST00000525854 C20orf203Q8NBC4 194 aa7.56□□□□□ -1.2
HIF3A-209ENST00000525854 CLRN3Q8NCR9 226 aa7.56□□□□□ -1.2
HIF3A-209ENST00000525854 GTSF1Q8WW33 167 aa7.56□□□□□ -1.2
HIF3A-209ENST00000525854 NDUFS6O75380 124 aaKnown RBP7.55□□□□□ -1.2
HIF3A-209ENST00000525854 PRSS1P07477 247 aa7.55□□□□□ -1.2
HIF3A-209ENST00000525854 CEBPGP53567 150 aa7.55□□□□□ -1.2
HIF3A-209ENST00000525854 CT83Q5H943 113 aa7.55□□□□□ -1.2
HIF3A-209ENST00000525854 UQCC3Q6UW78 93 aa7.55□□□□□ -1.2
HIF3A-209ENST00000525854 GATD1Q8NB37 220 aa7.55□□□□□ -1.2
HIF3A-209ENST00000525854 CIRBP-AS1Q8TBR5 109 aa7.55□□□□□ -1.2
HIF3A-209ENST00000525854 DEFB104AQ8WTQ1 72 aa7.55□□□□□ -1.2
HIF3A-209ENST00000525854 BORCS7Q96B45 105 aa7.55□□□□□ -1.2
HIF3A-209ENST00000525854 EIF5A2Q9GZV4 153 aaKnown RBP7.55□□□□□ -1.2
HIF3A-209ENST00000525854 IGLV4-60A0A075B6I1 120 aa7.54□□□□□ -1.2
HIF3A-209ENST00000525854 IGLV10-54A0A075B6I4 117 aa7.54□□□□□ -1.2
HIF3A-209ENST00000525854 TRAV26-2A0A0B4J265 109 aa7.54□□□□□ -1.2
HIF3A-209ENST00000525854 NCR2O95944 276 aa7.54□□□□□ -1.2
HIF3A-209ENST00000525854 C9orf163Q8N9P6 203 aa7.54□□□□□ -1.2
HIF3A-209ENST00000525854 J3QL48 77 aa7.53□□□□□ -1.2
HIF3A-209ENST00000525854 FOXA3P55318 350 aaPredicted RBP7.53□□□□□ -1.2
HIF3A-209ENST00000525854 IFITM2Q01629 132 aa7.53□□□□□ -1.2
HIF3A-209ENST00000525854 SMIM7Q9BQ49 75 aa7.53□□□□□ -1.2
HIF3A-209ENST00000525854 HERC1Q15751 4861 aa7.52□□□□□ -1.2
HIF3A-209ENST00000525854 hDV102S1A0JD36 115 aa7.52□□□□□ -1.21
HIF3A-209ENST00000525854 H7C423 109 aa7.52□□□□□ -1.21
HIF3A-209ENST00000525854 APCSP02743 223 aa7.52□□□□□ -1.21
HIF3A-209ENST00000525854 AMMECR1LQ6DCA0 310 aa7.52□□□□□ -1.21
HIF3A-209ENST00000525854 RPL39LQ96EH5 51 aaKnown RBP7.52□□□□□ -1.21
HIF3A-209ENST00000525854 GFRA4Q9GZZ7 299 aa7.52□□□□□ -1.21
HIF3A-209ENST00000525854 AP5S1Q9NUS5 200 aa7.52□□□□□ -1.21
HIF3A-209ENST00000525854 MYCBP2O75592 4640 aa7.52□□□□□ -1.21
HIF3A-209ENST00000525854 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.51□□□□□ -1.21
HIF3A-209ENST00000525854 FAM231BA6NCW3 169 aa7.51□□□□□ -1.21
HIF3A-209ENST00000525854 SDHAF1A6NFY7 115 aa7.51□□□□□ -1.21
HIF3A-209ENST00000525854 ZNF727A8MUV8 499 aa7.51□□□□□ -1.21
HIF3A-209ENST00000525854 CNBPP62633 177 aaKnown RBP7.51□□□□□ -1.21
HIF3A-209ENST00000525854 CFAP161Q6P656 301 aa7.51□□□□□ -1.21
HIF3A-209ENST00000525854 LINC01551Q86U37 167 aa7.51□□□□□ -1.21
HIF3A-209ENST00000525854 TSKUQ8WUA8 353 aa7.51□□□□□ -1.21
HIF3A-209ENST00000525854 FAM210AQ96ND0 272 aa7.51□□□□□ -1.21
HIF3A-209ENST00000525854 TRBV6-5A0A0K0K1A5 114 aa7.5□□□□□ -1.21
HIF3A-209ENST00000525854 A0A1B0GUT8 65 aa7.5□□□□□ -1.21
HIF3A-209ENST00000525854 LINC00862A6NCI5 91 aa7.5□□□□□ -1.21
HIF3A-209ENST00000525854 I3L3M4 83 aa7.5□□□□□ -1.21
HIF3A-209ENST00000525854 PMCHP20382 165 aa7.5□□□□□ -1.21
HIF3A-209ENST00000525854 RNASEKQ6P5S7 137 aaKnown RBP7.5□□□□□ -1.21
HIF3A-209ENST00000525854 COMMD7Q86VX2 200 aa7.5□□□□□ -1.21
HIF3A-209ENST00000525854 OSTCQ9NRP0 149 aa7.5□□□□□ -1.21
HIF3A-209ENST00000525854 HIGD1CA8MV81 97 aa7.49□□□□□ -1.21
HIF3A-209ENST00000525854 SDIM1Q6ZPB5 146 aa7.49□□□□□ -1.21
HIF3A-209ENST00000525854 TMEM191AQ9H0A3 160 aa7.49□□□□□ -1.21
HIF3A-209ENST00000525854 ST20Q9HBF5 79 aa7.49□□□□□ -1.21
HIF3A-209ENST00000525854 IGHV3-64A0A075B6Q5 118 aa7.48□□□□□ -1.21
HIF3A-209ENST00000525854 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.48□□□□□ -1.21
HIF3A-209ENST00000525854 IGKV3OR2-268A0A0C4DH90 116 aa7.48□□□□□ -1.21
HIF3A-209ENST00000525854 IGKV2-29A2NJV5 120 aaPredicted RBP7.48□□□□□ -1.21
HIF3A-209ENST00000525854 GAGE12HA6NDE8 117 aa7.48□□□□□ -1.21
HIF3A-209ENST00000525854 KRTAP29-1A8MX34 341 aaPredicted RBP7.48□□□□□ -1.21
HIF3A-209ENST00000525854 SRP19P09132 144 aaKnown RBP7.48□□□□□ -1.21
HIF3A-209ENST00000525854 FGF6P10767 208 aa7.48□□□□□ -1.21
HIF3A-209ENST00000525854 ZNF25P17030 456 aaPredicted RBP7.48□□□□□ -1.21
HIF3A-209ENST00000525854 FAM74A3Q4VXF1 159 aa7.48□□□□□ -1.21
HIF3A-209ENST00000525854 MRAP2Q96G30 205 aa7.48□□□□□ -1.21
HIF3A-209ENST00000525854 BTF3L4Q96K17 158 aa7.48□□□□□ -1.21
HIF3A-209ENST00000525854 KRTAP10-4P60372 401 aaPredicted RBP7.47□□□□□ -1.21
HIF3A-209ENST00000525854 RPL37AP61513 92 aaKnown RBP7.47□□□□□ -1.21
HIF3A-209ENST00000525854 RIGQ13278 110 aa7.47□□□□□ -1.21
HIF3A-209ENST00000525854 TMEM241Q24JQ0 296 aa7.47□□□□□ -1.21
HIF3A-209ENST00000525854 CHCHD10Q8WYQ3 142 aaPredicted RBP7.47□□□□□ -1.21
HIF3A-209ENST00000525854 TMEM101Q96IK0 257 aa7.47□□□□□ -1.21
HIF3A-209ENST00000525854 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.47□□□□□ -1.21
HIF3A-209ENST00000525854 RAB4AP20338 218 aa7.46□□□□□ -1.22
HIF3A-209ENST00000525854 DPH3Q96FX2 82 aa7.46□□□□□ -1.22
HIF3A-209ENST00000525854 V9GYV3 84 aa7.46□□□□□ -1.22
HIF3A-209ENST00000525854 TRBV27A0A0K0K1C4 114 aa7.45□□□□□ -1.22
HIF3A-209ENST00000525854 PPP1R17O96001 155 aa7.45□□□□□ -1.22
HIF3A-209ENST00000525854 TSHBP01222 138 aa7.45□□□□□ -1.22
HIF3A-209ENST00000525854 SLPIP03973 132 aa7.45□□□□□ -1.22
HIF3A-209ENST00000525854 ESDP10768 282 aa7.45□□□□□ -1.22
HIF3A-209ENST00000525854 S100A1P23297 94 aa7.45□□□□□ -1.22
HIF3A-209ENST00000525854 CIRBPQ14011 172 aaKnown RBP7.45□□□□□ -1.22
HIF3A-209ENST00000525854 AMN1Q8IY45 258 aa7.45□□□□□ -1.22
HIF3A-209ENST00000525854 C15orf56Q8N910 161 aa7.45□□□□□ -1.22
HIF3A-209ENST00000525854 OR5A1Q8NGJ0 315 aa7.45□□□□□ -1.22
HIF3A-209ENST00000525854 ISOC2Q96AB3 205 aa7.45□□□□□ -1.22
HIF3A-209ENST00000525854 RNF185Q96GF1 192 aa7.45□□□□□ -1.22
HIF3A-209ENST00000525854 NAT8BQ9UHF3 227 aa7.45□□□□□ -1.22
HIF3A-209ENST00000525854 PANO1I0J062 215 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms