RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 APOC3P02656 99 aa2.79□□□□□ -1.96
CD44-213ENST00000525209 MGST1P10620 155 aaKnown RBP2.79□□□□□ -1.96
CD44-213ENST00000525209 IGFBP7Q16270 282 aa2.79□□□□□ -1.96
CD44-213ENST00000525209 SPANXN1Q5VSR9 72 aa2.79□□□□□ -1.96
CD44-213ENST00000525209 ZNF826PQ6ZT77 177 aa2.79□□□□□ -1.96
CD44-213ENST00000525209 ARPINQ7Z6K5 226 aa2.79□□□□□ -1.96
CD44-213ENST00000525209 ARL17AQ8IVW1 177 aa2.79□□□□□ -1.96
CD44-213ENST00000525209 MUCL1Q96DR8 90 aa2.79□□□□□ -1.96
CD44-213ENST00000525209 SMCO4Q9NRQ5 59 aa2.79□□□□□ -1.96
CD44-213ENST00000525209 PIEZO2Q9H5I5 2752 aa2.79□□□□□ -1.96
CD44-213ENST00000525209 PLXNA2O75051 1894 aa2.79□□□□□ -1.96
CD44-213ENST00000525209 DMXL2Q8TDJ6 3036 aa2.79□□□□□ -1.96
CD44-213ENST00000525209 CCDC88CQ9P219 2028 aa2.78□□□□□ -1.96
CD44-213ENST00000525209 APC2O95996 2303 aa2.78□□□□□ -1.96
CD44-213ENST00000525209 IGHV3-64A0A075B6Q5 118 aa2.78□□□□□ -1.96
CD44-213ENST00000525209 A0A087WSZ3 146 aa2.78□□□□□ -1.96
CD44-213ENST00000525209 ADCYAP1P18509 176 aa2.78□□□□□ -1.96
CD44-213ENST00000525209 CBLN1P23435 193 aa2.78□□□□□ -1.96
CD44-213ENST00000525209 DSCR4P56555 118 aaPredicted RBP2.78□□□□□ -1.96
CD44-213ENST00000525209 C14orf177Q52M58 125 aa2.78□□□□□ -1.96
CD44-213ENST00000525209 SPANXN5Q5MJ07 72 aa2.78□□□□□ -1.96
CD44-213ENST00000525209 COMMD6Q7Z4G1 85 aa2.78□□□□□ -1.96
CD44-213ENST00000525209 KRTAP7-1Q8IUC3 87 aa2.78□□□□□ -1.96
CD44-213ENST00000525209 Q8N9P0 234 aaPredicted RBP2.78□□□□□ -1.96
CD44-213ENST00000525209 DYNLRB2Q8TF09 96 aa2.78□□□□□ -1.96
CD44-213ENST00000525209 TSLPQ969D9 159 aa2.78□□□□□ -1.96
CD44-213ENST00000525209 OR8B2Q96RD0 313 aa2.78□□□□□ -1.96
CD44-213ENST00000525209 COL4A2P08572 1712 aa2.78□□□□□ -1.96
CD44-213ENST00000525209 MYO18BQ8IUG5 2567 aa2.77□□□□□ -1.97
CD44-213ENST00000525209 SPEGQ15772 3267 aa2.77□□□□□ -1.97
CD44-213ENST00000525209 NACAE9PAV3 2078 aa2.77□□□□□ -1.97
CD44-213ENST00000525209 CREBBPQ92793 2442 aa2.77□□□□□ -1.97
CD44-213ENST00000525209 SCN3AQ9NY46 2000 aa2.77□□□□□ -1.97
CD44-213ENST00000525209 IGLV10-54A0A075B6I4 117 aa2.77□□□□□ -1.97
CD44-213ENST00000525209 IGHV3OR16-8A0A075B7F1 116 aa2.77□□□□□ -1.97
CD44-213ENST00000525209 hADV29S1A0JD25 119 aa2.77□□□□□ -1.97
CD44-213ENST00000525209 E7EUB6 86 aa2.77□□□□□ -1.97
CD44-213ENST00000525209 PDCD5O14737 125 aa2.77□□□□□ -1.97
CD44-213ENST00000525209 HCRTO43612 131 aa2.77□□□□□ -1.97
CD44-213ENST00000525209 IGKCP01834 107 aa2.77□□□□□ -1.97
CD44-213ENST00000525209 BAALC-AS2P0C853 105 aa2.77□□□□□ -1.97
CD44-213ENST00000525209 ZNF345Q14585 488 aa2.77□□□□□ -1.97
CD44-213ENST00000525209 C9orf106Q8NAJ2 232 aa2.77□□□□□ -1.97
CD44-213ENST00000525209 S100A16Q96FQ6 103 aaKnown RBP2.77□□□□□ -1.97
CD44-213ENST00000525209 C20orf78Q9BR46 151 aa2.77□□□□□ -1.97
CD44-213ENST00000525209 NDUFA12Q9UI09 145 aa2.77□□□□□ -1.97
CD44-213ENST00000525209 S4R3C0 116 aa2.77□□□□□ -1.97
CD44-213ENST00000525209 SDK2Q58EX2 2172 aa2.77□□□□□ -1.97
CD44-213ENST00000525209 HELZ2Q9BYK8 2649 aaKnown RBP2.76□□□□□ -1.97
CD44-213ENST00000525209 IGKV1D-17A0A075B6S4 117 aa2.76□□□□□ -1.97
CD44-213ENST00000525209 TRAV2A0A0B4J234 112 aa2.76□□□□□ -1.97
CD44-213ENST00000525209 PIGBOS1A0A0B4J2F0 54 aa2.76□□□□□ -1.97
CD44-213ENST00000525209 ATOX1O00244 68 aa2.76□□□□□ -1.97
CD44-213ENST00000525209 NUPR1O60356 82 aa2.76□□□□□ -1.97
CD44-213ENST00000525209 CCKP06307 115 aa2.76□□□□□ -1.97
CD44-213ENST00000525209 RBM3P98179 157 aaKnown RBP2.76□□□□□ -1.97
CD44-213ENST00000525209 DEFA5Q01523 94 aa2.76□□□□□ -1.97
CD44-213ENST00000525209 RHOHQ15669 191 aa2.76□□□□□ -1.97
CD44-213ENST00000525209 Q1T7F1 81 aa2.76□□□□□ -1.97
CD44-213ENST00000525209 KRTAP25-1Q3LHN0 102 aa2.76□□□□□ -1.97
CD44-213ENST00000525209 CASC2Q6XLA1 102 aa2.76□□□□□ -1.97
CD44-213ENST00000525209 TMEM136Q6ZRR5 245 aa2.76□□□□□ -1.97
CD44-213ENST00000525209 LINC00612Q8N6U2 182 aa2.76□□□□□ -1.97
CD44-213ENST00000525209 MYOZ3Q8TDC0 251 aa2.76□□□□□ -1.97
CD44-213ENST00000525209 TMEM141Q96I45 108 aa2.76□□□□□ -1.97
CD44-213ENST00000525209 RABAC1Q9UI14 185 aa2.76□□□□□ -1.97
CD44-213ENST00000525209 IGSF10Q6WRI0 2623 aa2.76□□□□□ -1.97
CD44-213ENST00000525209 PCDH15Q96QU1 1955 aa2.76□□□□□ -1.97
CD44-213ENST00000525209 KIAA1549Q9HCM3 1950 aa2.76□□□□□ -1.97
CD44-213ENST00000525209 UNC13CQ8NB66 2214 aa2.76□□□□□ -1.97
CD44-213ENST00000525209 ZZEF1O43149 2961 aa2.76□□□□□ -1.97
CD44-213ENST00000525209 MUC4Q99102 2169 aa2.76□□□□□ -1.97
CD44-213ENST00000525209 SPTA1P02549 2419 aa2.76□□□□□ -1.97
CD44-213ENST00000525209 PTPRQQ9UMZ3 2332 aa2.75□□□□□ -1.97
CD44-213ENST00000525209 WDFY3Q8IZQ1 3526 aa2.75□□□□□ -1.97
CD44-213ENST00000525209 AHCTF1Q8WYP5 2266 aa2.75□□□□□ -1.97
CD44-213ENST00000525209 LOC400499M0QZD8 3231 aa2.75□□□□□ -1.97
CD44-213ENST00000525209 MIFP14174 115 aa2.75□□□□□ -1.97
CD44-213ENST00000525209 HMGA1P17096 107 aaKnown RBP2.75□□□□□ -1.97
CD44-213ENST00000525209 POLR2JP52435 117 aaKnown RBP2.75□□□□□ -1.97
CD44-213ENST00000525209 S100A7L2Q5SY68 101 aa2.75□□□□□ -1.97
CD44-213ENST00000525209 KPRPQ5T749 579 aaPredicted RBP2.75□□□□□ -1.97
CD44-213ENST00000525209 MAPK1IP1LQ8NDC0 245 aa2.75□□□□□ -1.97
CD44-213ENST00000525209 MRPL35Q9NZE8 188 aaKnown RBP2.75□□□□□ -1.97
CD44-213ENST00000525209 CPAMD8Q8IZJ3 1885 aa2.75□□□□□ -1.97
CD44-213ENST00000525209 ZNF462Q96JM2 2506 aa2.75□□□□□ -1.97
CD44-213ENST00000525209 HECTD1Q9ULT8 2610 aa2.74□□□□□ -1.97
CD44-213ENST00000525209 SNRNP200O75643 2136 aaKnown RBP2.74□□□□□ -1.97
CD44-213ENST00000525209 IGLV2-18A0A075B6J9 118 aa2.74□□□□□ -1.97
CD44-213ENST00000525209 DEFB133Q30KQ1 61 aa2.74□□□□□ -1.97
CD44-213ENST00000525209 DEFB109BQ30KR1 87 aa2.74□□□□□ -1.97
CD44-213ENST00000525209 KLK12Q9UKR0 248 aa2.74□□□□□ -1.97
CD44-213ENST00000525209 FREM2Q5SZK8 3169 aa2.74□□□□□ -1.97
CD44-213ENST00000525209 RP1P56715 2156 aa2.74□□□□□ -1.97
CD44-213ENST00000525209 ESPL1Q14674 2120 aa2.74□□□□□ -1.97
CD44-213ENST00000525209 MDC1Q14676 2089 aaKnown RBP2.73□□□□□ -1.97
CD44-213ENST00000525209 A0A0J9YX75 114 aa2.73□□□□□ -1.97
CD44-213ENST00000525209 ODF3BA8MYP8 253 aa2.73□□□□□ -1.97
CD44-213ENST00000525209 H3BRM9 83 aa2.73□□□□□ -1.97
CD44-213ENST00000525209 FAUP35544 74 aaKnown RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms