RNA–Protein interactions for RNA: ENST00000525124.1

DEPDC1-205, Transcript of DEP domain containing 1, humanhuman

TSL 3

Gene DEPDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-205ENST00000525124 PFDN1O60925 122 aa5.32□□□□□ -1.56
DEPDC1-205ENST00000525124 PTTG1IPP53801 180 aa5.32□□□□□ -1.56
DEPDC1-205ENST00000525124 ZNF345Q14585 488 aa5.32□□□□□ -1.56
DEPDC1-205ENST00000525124 C20orf203Q8NBC4 194 aa5.32□□□□□ -1.56
DEPDC1-205ENST00000525124 PGLYRP4Q96LB8 373 aa5.32□□□□□ -1.56
DEPDC1-205ENST00000525124 BATF3Q9NR55 127 aa5.32□□□□□ -1.56
DEPDC1-205ENST00000525124 IGHV3-64A0A075B6Q5 118 aa5.31□□□□□ -1.56
DEPDC1-205ENST00000525124 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.31□□□□□ -1.56
DEPDC1-205ENST00000525124 IGLC6P0CF74 106 aa5.31□□□□□ -1.56
DEPDC1-205ENST00000525124 GAGE6Q13070 117 aa5.31□□□□□ -1.56
DEPDC1-205ENST00000525124 TMUB2Q71RG4 321 aa5.31□□□□□ -1.56
DEPDC1-205ENST00000525124 SMIM12Q96EX1 92 aa5.31□□□□□ -1.56
DEPDC1-205ENST00000525124 ARPC5O15511 151 aa5.3□□□□□ -1.56
DEPDC1-205ENST00000525124 RPS20P60866 119 aaKnown RBP5.3□□□□□ -1.56
DEPDC1-205ENST00000525124 CACNG7P62955 275 aa5.3□□□□□ -1.56
DEPDC1-205ENST00000525124 CLPSL2Q6UWE3 100 aa5.3□□□□□ -1.56
DEPDC1-205ENST00000525124 KCNRGQ8N5I3 272 aa5.3□□□□□ -1.56
DEPDC1-205ENST00000525124 SPACA4Q8TDM5 124 aa5.3□□□□□ -1.56
DEPDC1-205ENST00000525124 SFT2D1Q8WV19 159 aa5.3□□□□□ -1.56
DEPDC1-205ENST00000525124 C11orf52Q96A22 123 aa5.3□□□□□ -1.56
DEPDC1-205ENST00000525124 PLAC8Q9NZF1 115 aa5.3□□□□□ -1.56
DEPDC1-205ENST00000525124 IGLV4-60A0A075B6I1 120 aa5.29□□□□□ -1.56
DEPDC1-205ENST00000525124 A0A087WYN8 130 aa5.29□□□□□ -1.56
DEPDC1-205ENST00000525124 hDV102S1A0JD36 115 aa5.29□□□□□ -1.56
DEPDC1-205ENST00000525124 C19orf71A6NCJ1 209 aa5.29□□□□□ -1.56
DEPDC1-205ENST00000525124 HMSDA8MTL9 139 aa5.29□□□□□ -1.56
DEPDC1-205ENST00000525124 F2Z2F3 143 aa5.29□□□□□ -1.56
DEPDC1-205ENST00000525124 RPL35P42766 123 aaKnown RBP5.29□□□□□ -1.56
DEPDC1-205ENST00000525124 SUMO4Q6EEV6 95 aa5.29□□□□□ -1.56
DEPDC1-205ENST00000525124 WDR73Q6P4I2 378 aa5.29□□□□□ -1.56
DEPDC1-205ENST00000525124 RASL11AQ6T310 242 aa5.29□□□□□ -1.56
DEPDC1-205ENST00000525124 FER1L6-AS1Q8NA97 138 aa5.29□□□□□ -1.56
DEPDC1-205ENST00000525124 FAM213BQ8TBF2 198 aa5.29□□□□□ -1.56
DEPDC1-205ENST00000525124 TMEM243Q9BU79 118 aa5.29□□□□□ -1.56
DEPDC1-205ENST00000525124 MANBALQ9NQG1 85 aa5.29□□□□□ -1.56
DEPDC1-205ENST00000525124 NIT2Q9NQR4 276 aa5.29□□□□□ -1.56
DEPDC1-205ENST00000525124 IGLV10-54A0A075B6I4 117 aa5.28□□□□□ -1.56
DEPDC1-205ENST00000525124 MUC21A0A0G2JKD1 596 aa5.28□□□□□ -1.56
DEPDC1-205ENST00000525124 MUC21A0A140T8X8 626 aa5.28□□□□□ -1.56
DEPDC1-205ENST00000525124 XKRY2A2RUG3 117 aa5.28□□□□□ -1.56
DEPDC1-205ENST00000525124 TRGC1P0CF51 173 aa5.28□□□□□ -1.56
DEPDC1-205ENST00000525124 CFAP161Q6P656 301 aa5.28□□□□□ -1.56
DEPDC1-205ENST00000525124 DPH3P1Q9H4G8 78 aa5.28□□□□□ -1.56
DEPDC1-205ENST00000525124 TRAV1-1A0A0B4J248 108 aa5.27□□□□□ -1.57
DEPDC1-205ENST00000525124 MGPP08493 103 aa5.27□□□□□ -1.57
DEPDC1-205ENST00000525124 EIF5AP63241 154 aaKnown RBP5.27□□□□□ -1.57
DEPDC1-205ENST00000525124 CCL20P78556 96 aa5.27□□□□□ -1.57
DEPDC1-205ENST00000525124 C15orf56Q8N910 161 aa5.27□□□□□ -1.57
DEPDC1-205ENST00000525124 C7orf33Q8WU49 177 aa5.27□□□□□ -1.57
DEPDC1-205ENST00000525124 LINC01600Q96MT4 127 aa5.27□□□□□ -1.57
DEPDC1-205ENST00000525124 CNFNQ9BYD5 112 aa5.27□□□□□ -1.57
DEPDC1-205ENST00000525124 GFRA4Q9GZZ7 299 aa5.27□□□□□ -1.57
DEPDC1-205ENST00000525124 BIN3Q9NQY0 253 aa5.27□□□□□ -1.57
DEPDC1-205ENST00000525124 LRP2P98164 4655 aa5.26□□□□□ -1.57
DEPDC1-205ENST00000525124 H7C423 109 aa5.26□□□□□ -1.57
DEPDC1-205ENST00000525124 PHOX2AO14813 284 aa5.26□□□□□ -1.57
DEPDC1-205ENST00000525124 UBE2L6O14933 153 aa5.26□□□□□ -1.57
DEPDC1-205ENST00000525124 BCL2L11O43521 198 aa5.26□□□□□ -1.57
DEPDC1-205ENST00000525124 NDUFS6O75380 124 aaKnown RBP5.26□□□□□ -1.57
DEPDC1-205ENST00000525124 RPS10P46783 165 aaKnown RBP5.26□□□□□ -1.57
DEPDC1-205ENST00000525124 NKX2-5P52952 324 aaPredicted RBP5.26□□□□□ -1.57
DEPDC1-205ENST00000525124 COTL1Q14019 142 aa5.26□□□□□ -1.57
DEPDC1-205ENST00000525124 CENPWQ5EE01 88 aa5.26□□□□□ -1.57
DEPDC1-205ENST00000525124 C9orf62Q8N4C0 152 aa5.26□□□□□ -1.57
DEPDC1-205ENST00000525124 OR2D3Q8NGH3 330 aa5.26□□□□□ -1.57
DEPDC1-205ENST00000525124 GVQW2A0A096LPI5 108 aaPredicted RBP5.25□□□□□ -1.57
DEPDC1-205ENST00000525124 KANTRA0A1W2PQU2 76 aa5.25□□□□□ -1.57
DEPDC1-205ENST00000525124 NCR2O95944 276 aa5.25□□□□□ -1.57
DEPDC1-205ENST00000525124 CHTF8P0CG12 524 aa5.25□□□□□ -1.57
DEPDC1-205ENST00000525124 NTF3P20783 257 aa5.25□□□□□ -1.57
DEPDC1-205ENST00000525124 CTRLP40313 264 aa5.25□□□□□ -1.57
DEPDC1-205ENST00000525124 AMTP48728 403 aa5.25□□□□□ -1.57
DEPDC1-205ENST00000525124 RAB5CP51148 216 aa5.25□□□□□ -1.57
DEPDC1-205ENST00000525124 SSTP61278 116 aa5.25□□□□□ -1.57
DEPDC1-205ENST00000525124 LYZL1Q6UWQ5 148 aa5.25□□□□□ -1.57
DEPDC1-205ENST00000525124 DPH3Q96FX2 82 aa5.25□□□□□ -1.57
DEPDC1-205ENST00000525124 FAM210AQ96ND0 272 aa5.25□□□□□ -1.57
DEPDC1-205ENST00000525124 PKIGQ9Y2B9 76 aa5.25□□□□□ -1.57
DEPDC1-205ENST00000525124 A0A1B0GV50 99 aa5.24□□□□□ -1.57
DEPDC1-205ENST00000525124 TEX46H3BTG2 121 aa5.24□□□□□ -1.57
DEPDC1-205ENST00000525124 PDE6DO43924 150 aa5.24□□□□□ -1.57
DEPDC1-205ENST00000525124 GNG4P50150 75 aa5.24□□□□□ -1.57
DEPDC1-205ENST00000525124 SULT1A2P50226 295 aa5.24□□□□□ -1.57
DEPDC1-205ENST00000525124 COX6A2Q02221 97 aa5.24□□□□□ -1.57
DEPDC1-205ENST00000525124 RGS21Q2M5E4 152 aa5.24□□□□□ -1.57
DEPDC1-205ENST00000525124 TPPP3Q9BW30 176 aa5.24□□□□□ -1.57
DEPDC1-205ENST00000525124 TRBV20OR9-2A0A075B6H5 130 aa5.23□□□□□ -1.57
DEPDC1-205ENST00000525124 GAGE12HA6NDE8 117 aa5.23□□□□□ -1.57
DEPDC1-205ENST00000525124 SMLR1H3BR10 107 aa5.23□□□□□ -1.57
DEPDC1-205ENST00000525124 IFNA1P01562 189 aa5.23□□□□□ -1.57
DEPDC1-205ENST00000525124 ZNF25P17030 456 aaPredicted RBP5.23□□□□□ -1.57
DEPDC1-205ENST00000525124 PRR3P79522 188 aaKnown RBP5.23□□□□□ -1.57
DEPDC1-205ENST00000525124 MEF2BQ02080 365 aaPredicted RBP5.23□□□□□ -1.57
DEPDC1-205ENST00000525124 TEX261Q6UWH6 196 aa5.23□□□□□ -1.57
DEPDC1-205ENST00000525124 GATD1Q8NB37 220 aa5.23□□□□□ -1.57
DEPDC1-205ENST00000525124 PRSS3P2Q8NHM4 247 aa5.23□□□□□ -1.57
DEPDC1-205ENST00000525124 GNG13Q9P2W3 67 aa5.23□□□□□ -1.57
DEPDC1-205ENST00000525124 LINC00474Q9P2X8 69 aa5.23□□□□□ -1.57
DEPDC1-205ENST00000525124 A0A0J9YXV3 536 aa5.22□□□□□ -1.57
DEPDC1-205ENST00000525124 RAB19A4D1S5 217 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms