RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 K7EMI3 77 aa10.95□□□□□ -0.66
TSPAN4-213ENST00000524895 LINC00614P0C842 121 aa10.95□□□□□ -0.66
TSPAN4-213ENST00000524895 LAGE3Q14657 143 aa10.95□□□□□ -0.66
TSPAN4-213ENST00000524895 ORMDL2Q53FV1 153 aa10.95□□□□□ -0.66
TSPAN4-213ENST00000524895 LYPD5Q6UWN5 251 aa10.95□□□□□ -0.66
TSPAN4-213ENST00000524895 APLNQ9ULZ1 77 aa10.95□□□□□ -0.66
TSPAN4-213ENST00000524895 TRBV25-1A0A075B6N4 114 aa10.94□□□□□ -0.66
TSPAN4-213ENST00000524895 TRBV6-8A0A0A6YYG3 113 aa10.94□□□□□ -0.66
TSPAN4-213ENST00000524895 IGHV1-24A0A0C4DH33 117 aa10.94□□□□□ -0.66
TSPAN4-213ENST00000524895 SERF1AO75920 110 aa10.94□□□□□ -0.66
TSPAN4-213ENST00000524895 NDUFA6P56556 154 aa10.94□□□□□ -0.66
TSPAN4-213ENST00000524895 TIRAPP58753 221 aa10.94□□□□□ -0.66
TSPAN4-213ENST00000524895 NTM-AS1Q6ZSK4 140 aa10.94□□□□□ -0.66
TSPAN4-213ENST00000524895 CHCHD1Q96BP2 118 aaKnown RBP10.94□□□□□ -0.66
TSPAN4-213ENST00000524895 URB1-AS1Q96HZ7 61 aa10.94□□□□□ -0.66
TSPAN4-213ENST00000524895 LINC01546A6NGU7 62 aa10.93□□□□□ -0.66
TSPAN4-213ENST00000524895 ESRGQ1W209 222 aa10.93□□□□□ -0.66
TSPAN4-213ENST00000524895 CSMD3Q7Z407 3707 aa10.92□□□□□ -0.66
TSPAN4-213ENST00000524895 C3orf84H3BNL1 204 aa10.92□□□□□ -0.66
TSPAN4-213ENST00000524895 HSBP1O75506 76 aa10.92□□□□□ -0.66
TSPAN4-213ENST00000524895 CCL18P55774 89 aa10.92□□□□□ -0.66
TSPAN4-213ENST00000524895 LELP1Q5T871 98 aa10.92□□□□□ -0.66
TSPAN4-213ENST00000524895 TMEM243Q9BU79 118 aa10.92□□□□□ -0.66
TSPAN4-213ENST00000524895 TMA7Q9Y2S6 64 aaKnown RBP10.92□□□□□ -0.66
TSPAN4-213ENST00000524895 S100A6P06703 90 aa10.91□□□□□ -0.66
TSPAN4-213ENST00000524895 LINC00310P59036 64 aa10.91□□□□□ -0.66
TSPAN4-213ENST00000524895 CHCHD5Q9BSY4 110 aa10.91□□□□□ -0.66
TSPAN4-213ENST00000524895 CHCHD7Q9BUK0 85 aa10.91□□□□□ -0.66
TSPAN4-213ENST00000524895 DYNC2H1Q8NCM8 4307 aaKnown RBP10.91□□□□□ -0.66
TSPAN4-213ENST00000524895 TRAV8-6A0A0B4J262 113 aa10.9□□□□□ -0.66
TSPAN4-213ENST00000524895 UBE2L6O14933 153 aa10.9□□□□□ -0.66
TSPAN4-213ENST00000524895 BTF3P20290 206 aaKnown RBP10.9□□□□□ -0.66
TSPAN4-213ENST00000524895 COA6Q5JTJ3 125 aaKnown RBP10.9□□□□□ -0.66
TSPAN4-213ENST00000524895 CASC10Q5T4H9 136 aa10.9□□□□□ -0.66
TSPAN4-213ENST00000524895 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.89□□□□□ -0.67
TSPAN4-213ENST00000524895 IGKV2-29A2NJV5 120 aaPredicted RBP10.89□□□□□ -0.67
TSPAN4-213ENST00000524895 ESDP10768 282 aa10.89□□□□□ -0.67
TSPAN4-213ENST00000524895 G0S2P27469 103 aa10.89□□□□□ -0.67
TSPAN4-213ENST00000524895 PMCHL1Q16048 86 aa10.89□□□□□ -0.67
TSPAN4-213ENST00000524895 UBE2DNLQ8IWF7 75 aa10.89□□□□□ -0.67
TSPAN4-213ENST00000524895 C20orf203Q8NBC4 194 aa10.89□□□□□ -0.67
TSPAN4-213ENST00000524895 TMEM18Q96B42 140 aa10.89□□□□□ -0.67
TSPAN4-213ENST00000524895 LINC00588Q9Y4M8 146 aa10.89□□□□□ -0.67
TSPAN4-213ENST00000524895 HBDP02042 147 aa10.88□□□□□ -0.67
TSPAN4-213ENST00000524895 C2orf66Q6UXQ4 117 aa10.88□□□□□ -0.67
TSPAN4-213ENST00000524895 CYSLTR1Q9Y271 337 aa10.88□□□□□ -0.67
TSPAN4-213ENST00000524895 MRPS16Q9Y3D3 137 aaKnown RBP10.88□□□□□ -0.67
TSPAN4-213ENST00000524895 STARD9Q9P2P6 4700 aa10.87□□□□□ -0.67
TSPAN4-213ENST00000524895 NUPR1O60356 82 aa10.87□□□□□ -0.67
TSPAN4-213ENST00000524895 RPL39P62891 51 aaKnown RBP10.87□□□□□ -0.67
TSPAN4-213ENST00000524895 GAGE6Q13070 117 aa10.87□□□□□ -0.67
TSPAN4-213ENST00000524895 TMEM262E9PQX1 116 aa10.86□□□□□ -0.67
TSPAN4-213ENST00000524895 H7C423 109 aa10.86□□□□□ -0.67
TSPAN4-213ENST00000524895 PKIAP61925 76 aa10.86□□□□□ -0.67
TSPAN4-213ENST00000524895 SMAGPQ0VAQ4 97 aa10.86□□□□□ -0.67
TSPAN4-213ENST00000524895 AMMECR1LQ6DCA0 310 aa10.86□□□□□ -0.67
TSPAN4-213ENST00000524895 WFDC10BQ8IUB3 73 aa10.86□□□□□ -0.67
TSPAN4-213ENST00000524895 FAM19A2Q8N3H0 131 aa10.86□□□□□ -0.67
TSPAN4-213ENST00000524895 A0A096LNJ9 63 aa10.85□□□□□ -0.67
TSPAN4-213ENST00000524895 FGF6P10767 208 aa10.85□□□□□ -0.67
TSPAN4-213ENST00000524895 PDZD11Q5EBL8 140 aa10.85□□□□□ -0.67
TSPAN4-213ENST00000524895 TOMM6Q96B49 74 aa10.85□□□□□ -0.67
TSPAN4-213ENST00000524895 A0A087WX48 190 aa10.84□□□□□ -0.67
TSPAN4-213ENST00000524895 LINC01549A6NIU2 74 aa10.84□□□□□ -0.67
TSPAN4-213ENST00000524895 UPK3BQ9BT76 320 aa10.84□□□□□ -0.67
TSPAN4-213ENST00000524895 TENM2Q9NT68 2774 aa10.84□□□□□ -0.67
TSPAN4-213ENST00000524895 SNRPEP62304 92 aaKnown RBP10.83□□□□□ -0.68
TSPAN4-213ENST00000524895 DGAT2L7PQ6IED9 249 aa10.83□□□□□ -0.68
TSPAN4-213ENST00000524895 TMEM101Q96IK0 257 aa10.83□□□□□ -0.68
TSPAN4-213ENST00000524895 SCGB3A1Q96QR1 104 aa10.83□□□□□ -0.68
TSPAN4-213ENST00000524895 SPANXA1Q9NS26 97 aa10.83□□□□□ -0.68
TSPAN4-213ENST00000524895 UBE2D4Q9Y2X8 147 aa10.83□□□□□ -0.68
TSPAN4-213ENST00000524895 ZNF25P17030 456 aaPredicted RBP10.82□□□□□ -0.68
TSPAN4-213ENST00000524895 MPV17L2Q567V2 206 aa10.82□□□□□ -0.68
TSPAN4-213ENST00000524895 MRPL52Q86TS9 123 aaKnown RBP10.82□□□□□ -0.68
TSPAN4-213ENST00000524895 OR5A1Q8NGJ0 315 aa10.82□□□□□ -0.68
TSPAN4-213ENST00000524895 TIMM21Q9BVV7 248 aa10.82□□□□□ -0.68
TSPAN4-213ENST00000524895 PLECQ15149 4684 aaKnown RBP10.81□□□□□ -0.68
TSPAN4-213ENST00000524895 SIVA1O15304 175 aa10.81□□□□□ -0.68
TSPAN4-213ENST00000524895 S100A2P29034 98 aa10.81□□□□□ -0.68
TSPAN4-213ENST00000524895 RBX1P62877 108 aa10.81□□□□□ -0.68
TSPAN4-213ENST00000524895 HIST3H2BBQ8N257 126 aa10.81□□□□□ -0.68
TSPAN4-213ENST00000524895 Q8N976 141 aa10.81□□□□□ -0.68
TSPAN4-213ENST00000524895 PYGO1Q9Y3Y4 419 aa10.81□□□□□ -0.68
TSPAN4-213ENST00000524895 C5orf52A6NGY3 159 aa10.8□□□□□ -0.68
TSPAN4-213ENST00000524895 LEPROTL1O95214 131 aa10.8□□□□□ -0.68
TSPAN4-213ENST00000524895 IGHV3-30P01768 117 aa10.8□□□□□ -0.68
TSPAN4-213ENST00000524895 IGHV3-33P01772 117 aa10.8□□□□□ -0.68
TSPAN4-213ENST00000524895 IGHV3-30-3P0DP02 117 aa10.8□□□□□ -0.68
TSPAN4-213ENST00000524895 IGHV3-30-5P0DP03 117 aa10.8□□□□□ -0.68
TSPAN4-213ENST00000524895 ERASQ7Z444 233 aa10.8□□□□□ -0.68
TSPAN4-213ENST00000524895 Q8N3U1 123 aa10.8□□□□□ -0.68
TSPAN4-213ENST00000524895 TIMM17AQ99595 171 aa10.8□□□□□ -0.68
TSPAN4-213ENST00000524895 A0A1B0GUV1 79 aa10.79□□□□□ -0.68
TSPAN4-213ENST00000524895 IGIPA6NJ69 53 aa10.79□□□□□ -0.68
TSPAN4-213ENST00000524895 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.79□□□□□ -0.68
TSPAN4-213ENST00000524895 ATP5LO75964 103 aa10.79□□□□□ -0.68
TSPAN4-213ENST00000524895 DNAH10OSP0CZ25 163 aa10.79□□□□□ -0.68
TSPAN4-213ENST00000524895 FABP4P15090 132 aa10.79□□□□□ -0.68
TSPAN4-213ENST00000524895 LINC01556Q5JQF7 62 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms