RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 FAM231AP0DMU4 169 aa6.12□□□□□ -1.43
CHD7-202ENST00000524602 FAM231CP0DMU5 169 aa6.12□□□□□ -1.43
CHD7-202ENST00000524602 HOXD3P31249 432 aaPredicted RBP6.12□□□□□ -1.43
CHD7-202ENST00000524602 C10orf126Q8N4M7 172 aa6.12□□□□□ -1.43
CHD7-202ENST00000524602 C10orf99Q6UWK7 81 aa6.12□□□□□ -1.43
CHD7-202ENST00000524602 RHODO00212 210 aa6.11□□□□□ -1.43
CHD7-202ENST00000524602 FSHBP01225 129 aa6.11□□□□□ -1.43
CHD7-202ENST00000524602 CFC1BP0CG36 223 aa6.11□□□□□ -1.43
CHD7-202ENST00000524602 CFC1P0CG37 223 aa6.11□□□□□ -1.43
CHD7-202ENST00000524602 ZFAND6Q6FIF0 208 aa6.11□□□□□ -1.43
CHD7-202ENST00000524602 Q6YL49 198 aa6.11□□□□□ -1.43
CHD7-202ENST00000524602 C1orf43Q9BWL3 253 aa6.11□□□□□ -1.43
CHD7-202ENST00000524602 VCX2Q9H322 139 aa6.11□□□□□ -1.43
CHD7-202ENST00000524602 PRO1854Q9UHT4 67 aa6.11□□□□□ -1.43
CHD7-202ENST00000524602 IGLV4-3A0A075B6K6 122 aa6.11□□□□□ -1.43
CHD7-202ENST00000524602 ZNF22P17026 224 aaPredicted RBP6.11□□□□□ -1.43
CHD7-202ENST00000524602 ZNF702PQ9H963 129 aa6.11□□□□□ -1.43
CHD7-202ENST00000524602 NOTCH2Q04721 2471 aa6.11□□□□□ -1.43
CHD7-202ENST00000524602 CR1P17927 2039 aa6.11□□□□□ -1.43
CHD7-202ENST00000524602 A8MWV9 139 aa6.11□□□□□ -1.43
CHD7-202ENST00000524602 TENM4Q6N022 2769 aa6.1□□□□□ -1.43
CHD7-202ENST00000524602 A0A0B4J2C4 111 aa6.1□□□□□ -1.43
CHD7-202ENST00000524602 LINC00467Q9BRT7 94 aa6.1□□□□□ -1.43
CHD7-202ENST00000524602 SBSPONQ8IVN8 264 aa6.1□□□□□ -1.43
CHD7-202ENST00000524602 APCP25054 2843 aa6.1□□□□□ -1.43
CHD7-202ENST00000524602 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.09□□□□□ -1.43
CHD7-202ENST00000524602 M0QXV9 152 aa6.09□□□□□ -1.43
CHD7-202ENST00000524602 M0R2P5 195 aa6.09□□□□□ -1.43
CHD7-202ENST00000524602 CHD6Q8TD26 2715 aa6.09□□□□□ -1.43
CHD7-202ENST00000524602 SMCPP49901 116 aaPredicted RBP6.09□□□□□ -1.43
CHD7-202ENST00000524602 MRPS36P82909 103 aaKnown RBP6.09□□□□□ -1.43
CHD7-202ENST00000524602 PEMTQ9UBM1 199 aa6.09□□□□□ -1.43
CHD7-202ENST00000524602 ZNF415Q09FC8 603 aa6.09□□□□□ -1.44
CHD7-202ENST00000524602 TTC32Q5I0X7 151 aa6.09□□□□□ -1.44
CHD7-202ENST00000524602 Q8N2B8 174 aa6.09□□□□□ -1.44
CHD7-202ENST00000524602 DUX5Q96PT3 197 aa6.09□□□□□ -1.44
CHD7-202ENST00000524602 OPRPNQ99935 248 aaPredicted RBP6.09□□□□□ -1.44
CHD7-202ENST00000524602 TNFRSF18Q9Y5U5 241 aa6.09□□□□□ -1.44
CHD7-202ENST00000524602 JMJD1CQ15652 2540 aa6.09□□□□□ -1.44
CHD7-202ENST00000524602 MXRA5Q9NR99 2828 aa6.08□□□□□ -1.44
CHD7-202ENST00000524602 H3BMM0 161 aa6.08□□□□□ -1.44
CHD7-202ENST00000524602 SPANXA1Q9NS26 97 aa6.08□□□□□ -1.44
CHD7-202ENST00000524602 NAV2Q8IVL1 2488 aa6.08□□□□□ -1.44
CHD7-202ENST00000524602 TCL1BO95988 128 aa6.08□□□□□ -1.44
CHD7-202ENST00000524602 RBMY1A1P0DJD3 496 aaKnown RBP6.08□□□□□ -1.44
CHD7-202ENST00000524602 RBMY1CP0DJD4 496 aa6.08□□□□□ -1.44
CHD7-202ENST00000524602 CD28P10747 220 aa6.08□□□□□ -1.44
CHD7-202ENST00000524602 RBMY1FQ15415 496 aaKnown RBP6.08□□□□□ -1.44
CHD7-202ENST00000524602 TEN1Q86WV5 123 aa6.08□□□□□ -1.44
CHD7-202ENST00000524602 PPDPFLQ8WWR9 84 aa6.08□□□□□ -1.44
CHD7-202ENST00000524602 DNAJC30Q96LL9 226 aa6.08□□□□□ -1.44
CHD7-202ENST00000524602 AKAP9Q99996 3911 aa6.08□□□□□ -1.44
CHD7-202ENST00000524602 A0A0J9YXV3 536 aa6.08□□□□□ -1.44
CHD7-202ENST00000524602 TMEM263Q8WUH6 116 aaKnown RBP6.08□□□□□ -1.44
CHD7-202ENST00000524602 TEX15Q9BXT5 2789 aa6.07□□□□□ -1.44
CHD7-202ENST00000524602 GAGE12JA6NER3 117 aa6.07□□□□□ -1.44
CHD7-202ENST00000524602 H7C2G1 150 aa6.07□□□□□ -1.44
CHD7-202ENST00000524602 GAGE7O76087 117 aa6.07□□□□□ -1.44
CHD7-202ENST00000524602 GAGE12FP0CL80 117 aa6.07□□□□□ -1.44
CHD7-202ENST00000524602 GAGE12GP0CL81 117 aa6.07□□□□□ -1.44
CHD7-202ENST00000524602 GAGE12IP0CL82 117 aa6.07□□□□□ -1.44
CHD7-202ENST00000524602 DEFB131AP59861 70 aa6.07□□□□□ -1.44
CHD7-202ENST00000524602 GAGE4Q13068 117 aa6.07□□□□□ -1.44
CHD7-202ENST00000524602 DUX3Q96PT4 197 aa6.07□□□□□ -1.44
CHD7-202ENST00000524602 SPXQ9BT56 116 aa6.07□□□□□ -1.44
CHD7-202ENST00000524602 TIMM21Q9BVV7 248 aa6.07□□□□□ -1.44
CHD7-202ENST00000524602 PPDPFQ9H3Y8 114 aa6.07□□□□□ -1.44
CHD7-202ENST00000524602 TINCRA0A1B0GVN0 87 aa6.07□□□□□ -1.44
CHD7-202ENST00000524602 KNCNA6PVL3 124 aa6.07□□□□□ -1.44
CHD7-202ENST00000524602 SCGB1C2P0DMR2 95 aa6.07□□□□□ -1.44
CHD7-202ENST00000524602 GAGE2BQ13066 116 aa6.07□□□□□ -1.44
CHD7-202ENST00000524602 DEFB113Q30KQ7 82 aa6.07□□□□□ -1.44
CHD7-202ENST00000524602 GAGE2EQ4V326 116 aa6.07□□□□□ -1.44
CHD7-202ENST00000524602 C4orf3Q8WVX3 66 aa6.07□□□□□ -1.44
CHD7-202ENST00000524602 GAGE2DQ9UEU5 116 aa6.07□□□□□ -1.44
CHD7-202ENST00000524602 IGHV3-33P01772 117 aa6.06□□□□□ -1.44
CHD7-202ENST00000524602 IGHV3-30-3P0DP02 117 aa6.06□□□□□ -1.44
CHD7-202ENST00000524602 NF1P21359 2839 aa6.06□□□□□ -1.44
CHD7-202ENST00000524602 A0A0J9YXY3 114 aa6.06□□□□□ -1.44
CHD7-202ENST00000524602 IGHV4-31P0DP07 118 aa6.06□□□□□ -1.44
CHD7-202ENST00000524602 FAM104AQ969W3 186 aa6.06□□□□□ -1.44
CHD7-202ENST00000524602 TRAV4A0A0B4J268 109 aa6.06□□□□□ -1.44
CHD7-202ENST00000524602 IGHV1-58A0A0C4DH39 117 aa6.06□□□□□ -1.44
CHD7-202ENST00000524602 MRPL23Q16540 153 aaKnown RBP6.06□□□□□ -1.44
CHD7-202ENST00000524602 MUSTN1Q8IVN3 82 aa6.06□□□□□ -1.44
CHD7-202ENST00000524602 FAM110AQ9BQ89 295 aa6.06□□□□□ -1.44
CHD7-202ENST00000524602 SPANXDQ9BXN6 97 aa6.06□□□□□ -1.44
CHD7-202ENST00000524602 YAE1D1Q9NRH1 226 aa6.06□□□□□ -1.44
CHD7-202ENST00000524602 BEX4Q9NWD9 120 aaPredicted RBP6.06□□□□□ -1.44
CHD7-202ENST00000524602 SPANXCQ9NY87 97 aa6.06□□□□□ -1.44
CHD7-202ENST00000524602 SNCGO76070 127 aa6.05□□□□□ -1.44
CHD7-202ENST00000524602 NHLRC4P0CG21 123 aaPredicted RBP6.05□□□□□ -1.44
CHD7-202ENST00000524602 SLURP1P55000 103 aa6.05□□□□□ -1.44
CHD7-202ENST00000524602 BEAN1Q3B7T3 259 aa6.05□□□□□ -1.44
CHD7-202ENST00000524602 RAX2Q96IS3 184 aa6.05□□□□□ -1.44
CHD7-202ENST00000524602 FN1P02751 2386 aaKnown RBP6.05□□□□□ -1.44
CHD7-202ENST00000524602 RBMY1BA6NDE4 496 aaKnown RBP6.05□□□□□ -1.44
CHD7-202ENST00000524602 RBMY1EA6NEQ0 496 aaKnown RBP6.05□□□□□ -1.44
CHD7-202ENST00000524602 CRLF1O75462 422 aa6.05□□□□□ -1.44
CHD7-202ENST00000524602 IGHV3-53P01767 116 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms