RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 DEFB130BP0DP73 79 aa7.13□□□□□ -1.27
VPS13B-212ENST00000524330 DEFB130AP0DP74 79 aa7.13□□□□□ -1.27
VPS13B-212ENST00000524330 DAD1P61803 113 aa7.13□□□□□ -1.27
VPS13B-212ENST00000524330 LBHQ53QV2 105 aaPredicted RBP7.13□□□□□ -1.27
VPS13B-212ENST00000524330 OXLD1Q5BKU9 147 aa7.13□□□□□ -1.27
VPS13B-212ENST00000524330 Q6ZSN1 163 aa7.13□□□□□ -1.27
VPS13B-212ENST00000524330 C2orf88Q9BSF0 95 aa7.13□□□□□ -1.27
VPS13B-212ENST00000524330 GAGE12JA6NER3 117 aa7.12□□□□□ -1.27
VPS13B-212ENST00000524330 PRSS29PA6NIE9 313 aa7.12□□□□□ -1.27
VPS13B-212ENST00000524330 CYSRT1A8MQ03 144 aa7.12□□□□□ -1.27
VPS13B-212ENST00000524330 H7C423 109 aa7.12□□□□□ -1.27
VPS13B-212ENST00000524330 M0R143 59 aa7.12□□□□□ -1.27
VPS13B-212ENST00000524330 P0DMU3 169 aa7.12□□□□□ -1.27
VPS13B-212ENST00000524330 FAM231AP0DMU4 169 aa7.12□□□□□ -1.27
VPS13B-212ENST00000524330 FAM231CP0DMU5 169 aa7.12□□□□□ -1.27
VPS13B-212ENST00000524330 UBE2D3P61077 147 aa7.12□□□□□ -1.27
VPS13B-212ENST00000524330 UBE2D2P62837 147 aa7.12□□□□□ -1.27
VPS13B-212ENST00000524330 GAGE1Q13065 139 aa7.12□□□□□ -1.27
VPS13B-212ENST00000524330 GAGE4Q13068 117 aa7.12□□□□□ -1.27
VPS13B-212ENST00000524330 GAGE5Q13069 117 aa7.12□□□□□ -1.27
VPS13B-212ENST00000524330 GAGE13Q4V321 117 aa7.12□□□□□ -1.27
VPS13B-212ENST00000524330 SLC25A29Q8N8R3 303 aa7.12□□□□□ -1.27
VPS13B-212ENST00000524330 PHLDA1Q8WV24 401 aaPredicted RBP7.12□□□□□ -1.27
VPS13B-212ENST00000524330 TIMM21Q9BVV7 248 aa7.12□□□□□ -1.27
VPS13B-212ENST00000524330 GTSF1LQ9H1H1 148 aa7.12□□□□□ -1.27
VPS13B-212ENST00000524330 MRPL35Q9NZE8 188 aaKnown RBP7.12□□□□□ -1.27
VPS13B-212ENST00000524330 DKK2Q9UBU2 259 aa7.12□□□□□ -1.27
VPS13B-212ENST00000524330 IGHV4-28A0A0C4DH34 117 aa7.11□□□□□ -1.27
VPS13B-212ENST00000524330 COX8AP10176 69 aa7.11□□□□□ -1.27
VPS13B-212ENST00000524330 FHL2Q14192 279 aa7.11□□□□□ -1.27
VPS13B-212ENST00000524330 FAM222AQ5U5X8 452 aa7.11□□□□□ -1.27
VPS13B-212ENST00000524330 SH2D6Q7Z4S9 175 aa7.11□□□□□ -1.27
VPS13B-212ENST00000524330 C14orf144Q96I85 54 aa7.11□□□□□ -1.27
VPS13B-212ENST00000524330 TMEM101Q96IK0 257 aa7.11□□□□□ -1.27
VPS13B-212ENST00000524330 CST9LQ9H4G1 147 aa7.11□□□□□ -1.27
VPS13B-212ENST00000524330 PRO0255Q9UI72 69 aa7.11□□□□□ -1.27
VPS13B-212ENST00000524330 HHLA3Q9XRX5 114 aa7.11□□□□□ -1.27
VPS13B-212ENST00000524330 MRPS16Q9Y3D3 137 aaKnown RBP7.11□□□□□ -1.27
VPS13B-212ENST00000524330 TRBV25-1A0A075B6N4 114 aa7.1□□□□□ -1.27
VPS13B-212ENST00000524330 SIVA1O15304 175 aa7.1□□□□□ -1.27
VPS13B-212ENST00000524330 DLEU1O43261 78 aa7.1□□□□□ -1.27
VPS13B-212ENST00000524330 ATP5G1P05496 136 aa7.1□□□□□ -1.27
VPS13B-212ENST00000524330 RPL39P62891 51 aaKnown RBP7.1□□□□□ -1.27
VPS13B-212ENST00000524330 MAJINQ3KP22 176 aa7.1□□□□□ -1.27
VPS13B-212ENST00000524330 ZC2HC1BQ5TFG8 222 aa7.1□□□□□ -1.27
VPS13B-212ENST00000524330 AMMECR1LQ6DCA0 310 aa7.1□□□□□ -1.27
VPS13B-212ENST00000524330 TMEM243Q9BU79 118 aa7.1□□□□□ -1.27
VPS13B-212ENST00000524330 IGHV3-38A0A0C4DH36 116 aa7.09□□□□□ -1.27
VPS13B-212ENST00000524330 NMUP48645 174 aa7.09□□□□□ -1.27
VPS13B-212ENST00000524330 SEC11AP67812 179 aa7.09□□□□□ -1.27
VPS13B-212ENST00000524330 MRPS36P82909 103 aaKnown RBP7.09□□□□□ -1.27
VPS13B-212ENST00000524330 CHCHD7Q9BUK0 85 aa7.09□□□□□ -1.27
VPS13B-212ENST00000524330 TEP1Q99973 2627 aaKnown RBP7.09□□□□□ -1.27
VPS13B-212ENST00000524330 NACAE9PAV3 2078 aa7.08□□□□□ -1.28
VPS13B-212ENST00000524330 JMJD1CQ15652 2540 aa7.08□□□□□ -1.28
VPS13B-212ENST00000524330 IGLV4-3A0A075B6K6 122 aa7.08□□□□□ -1.28
VPS13B-212ENST00000524330 PAX4O43316 350 aa7.08□□□□□ -1.28
VPS13B-212ENST00000524330 ZNF25P17030 456 aaPredicted RBP7.08□□□□□ -1.28
VPS13B-212ENST00000524330 KRTAP10-11P60412 298 aa7.08□□□□□ -1.28
VPS13B-212ENST00000524330 SAMD5Q5TGI4 173 aa7.08□□□□□ -1.28
VPS13B-212ENST00000524330 STPG4Q8N801 248 aa7.08□□□□□ -1.28
VPS13B-212ENST00000524330 Q8NAQ8 132 aa7.08□□□□□ -1.28
VPS13B-212ENST00000524330 CSDC2Q9Y534 153 aaKnown RBP7.08□□□□□ -1.28
VPS13B-212ENST00000524330 C11orf86A6NJI1 115 aa7.07□□□□□ -1.28
VPS13B-212ENST00000524330 GYPEP15421 78 aa7.07□□□□□ -1.28
VPS13B-212ENST00000524330 CTAG1AP78358 180 aa7.07□□□□□ -1.28
VPS13B-212ENST00000524330 ANKRD39Q53RE8 183 aa7.07□□□□□ -1.28
VPS13B-212ENST00000524330 TMEM170BQ5T4T1 132 aa7.07□□□□□ -1.28
VPS13B-212ENST00000524330 NFE4Q86UQ8 179 aa7.07□□□□□ -1.28
VPS13B-212ENST00000524330 OR5A1Q8NGJ0 315 aa7.07□□□□□ -1.28
VPS13B-212ENST00000524330 ATP6V0E2Q8NHE4 81 aa7.07□□□□□ -1.28
VPS13B-212ENST00000524330 UBE2D4Q9Y2X8 147 aa7.07□□□□□ -1.28
VPS13B-212ENST00000524330 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.06□□□□□ -1.28
VPS13B-212ENST00000524330 IGKV2-29A2NJV5 120 aaPredicted RBP7.06□□□□□ -1.28
VPS13B-212ENST00000524330 G3V4G9 280 aa7.06□□□□□ -1.28
VPS13B-212ENST00000524330 H3BRM9 83 aa7.06□□□□□ -1.28
VPS13B-212ENST00000524330 BOD1L2Q8IYS8 172 aa7.06□□□□□ -1.28
VPS13B-212ENST00000524330 DEFB104AQ8WTQ1 72 aa7.06□□□□□ -1.28
VPS13B-212ENST00000524330 AMELXQ99217 191 aa7.06□□□□□ -1.28
VPS13B-212ENST00000524330 CHAC1Q9BUX1 264 aa7.06□□□□□ -1.28
VPS13B-212ENST00000524330 C11orf68Q9H3H3 251 aaKnown RBP7.06□□□□□ -1.28
VPS13B-212ENST00000524330 GEMIN7Q9H840 131 aaKnown RBP7.06□□□□□ -1.28
VPS13B-212ENST00000524330 ATRQ13535 2644 aa7.05□□□□□ -1.28
VPS13B-212ENST00000524330 TRAV26-1A0A087WT03 109 aa7.05□□□□□ -1.28
VPS13B-212ENST00000524330 E9PLD3 99 aa7.05□□□□□ -1.28
VPS13B-212ENST00000524330 F5H768 121 aa7.05□□□□□ -1.28
VPS13B-212ENST00000524330 FGF6P10767 208 aa7.05□□□□□ -1.28
VPS13B-212ENST00000524330 MRPL23Q16540 153 aaKnown RBP7.05□□□□□ -1.28
VPS13B-212ENST00000524330 PLEKHB2Q96CS7 222 aa7.05□□□□□ -1.28
VPS13B-212ENST00000524330 SPATA25Q9BR10 227 aa7.05□□□□□ -1.28
VPS13B-212ENST00000524330 TRBV6-8A0A0A6YYG3 113 aa7.04□□□□□ -1.28
VPS13B-212ENST00000524330 TINCRA0A1B0GVN0 87 aa7.04□□□□□ -1.28
VPS13B-212ENST00000524330 COL5A1-AS1Q5SY13 56 aa7.04□□□□□ -1.28
VPS13B-212ENST00000524330 CHCHD5Q9BSY4 110 aa7.04□□□□□ -1.28
VPS13B-212ENST00000524330 HIGD1BQ9P298 99 aa7.04□□□□□ -1.28
VPS13B-212ENST00000524330 ICOSQ9Y6W8 199 aa7.04□□□□□ -1.28
VPS13B-212ENST00000524330 CUBNO60494 3623 aa7.03□□□□□ -1.28
VPS13B-212ENST00000524330 NOTCH3Q9UM47 2321 aa7.03□□□□□ -1.28
VPS13B-212ENST00000524330 IGLV4-69A0A075B6H9 119 aa7.03□□□□□ -1.28
VPS13B-212ENST00000524330 TRAV8-6A0A0B4J262 113 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms