RNA–Protein interactions for RNA: ENST00000524238.3

HMBOX1-211, Transcript of homeobox containing 1, humanhuman

TSL 2 BASIC

Gene HMBOX1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-211ENST00000524238 LMO4P61968 165 aa5.49□□□□□ -1.53
HMBOX1-211ENST00000524238 S100A7L2Q5SY68 101 aa5.49□□□□□ -1.53
HMBOX1-211ENST00000524238 CEMP1Q6PRD7 247 aaPredicted RBP5.49□□□□□ -1.53
HMBOX1-211ENST00000524238 Q6ZSV7 163 aa5.49□□□□□ -1.53
HMBOX1-211ENST00000524238 PRIMA1Q86XR5 153 aa5.49□□□□□ -1.53
HMBOX1-211ENST00000524238 Q9H8V8 135 aa5.49□□□□□ -1.53
HMBOX1-211ENST00000524238 CDKN2A-AS1Q9UH64 79 aa5.49□□□□□ -1.53
HMBOX1-211ENST00000524238 VPS13AQ96RL7 3174 aa5.49□□□□□ -1.53
HMBOX1-211ENST00000524238 WNK2Q9Y3S1 2297 aa5.48□□□□□ -1.53
HMBOX1-211ENST00000524238 TRAV12-2A0A075B6T6 113 aa5.48□□□□□ -1.53
HMBOX1-211ENST00000524238 SPINK13Q1W4C9 94 aa5.48□□□□□ -1.53
HMBOX1-211ENST00000524238 FAM19A5Q7Z5A7 132 aaPredicted RBP5.48□□□□□ -1.53
HMBOX1-211ENST00000524238 SERP2Q8N6R1 65 aa5.48□□□□□ -1.53
HMBOX1-211ENST00000524238 C2orf48Q96LS8 159 aa5.48□□□□□ -1.53
HMBOX1-211ENST00000524238 A6NDX4 124 aa5.48□□□□□ -1.53
HMBOX1-211ENST00000524238 IGHV3-53P01767 116 aa5.48□□□□□ -1.53
HMBOX1-211ENST00000524238 CRPP02741 224 aa5.48□□□□□ -1.53
HMBOX1-211ENST00000524238 GRNP28799 593 aaKnown RBP5.48□□□□□ -1.53
HMBOX1-211ENST00000524238 C3orf56Q8N813 242 aa5.48□□□□□ -1.53
HMBOX1-211ENST00000524238 LINC00467Q9BRT7 94 aa5.48□□□□□ -1.53
HMBOX1-211ENST00000524238 UBTD1Q9HAC8 227 aa5.48□□□□□ -1.53
HMBOX1-211ENST00000524238 ABCA4P78363 2273 aa5.47□□□□□ -1.53
HMBOX1-211ENST00000524238 POLEQ07864 2286 aa5.47□□□□□ -1.53
HMBOX1-211ENST00000524238 GPR179Q6PRD1 2367 aa5.46□□□□□ -1.53
HMBOX1-211ENST00000524238 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.46□□□□□ -1.54
HMBOX1-211ENST00000524238 IGKV2-29A2NJV5 120 aaPredicted RBP5.46□□□□□ -1.54
HMBOX1-211ENST00000524238 A8MZ25 164 aa5.46□□□□□ -1.54
HMBOX1-211ENST00000524238 NDUFC2-KCTD14E9PQ53 114 aa5.46□□□□□ -1.54
HMBOX1-211ENST00000524238 IGKV3-20P01619 116 aa5.46□□□□□ -1.54
HMBOX1-211ENST00000524238 CFHR3Q02985 330 aa5.46□□□□□ -1.54
HMBOX1-211ENST00000524238 RNASE13Q5GAN3 156 aaKnown RBP5.46□□□□□ -1.54
HMBOX1-211ENST00000524238 ATP5EP2Q5VTU8 51 aa5.46□□□□□ -1.54
HMBOX1-211ENST00000524238 BPESC1Q9GZL8 116 aa5.46□□□□□ -1.54
HMBOX1-211ENST00000524238 IGHV3OR16-10A0A075B7F0 116 aa5.45□□□□□ -1.54
HMBOX1-211ENST00000524238 A8MTW9 85 aa5.45□□□□□ -1.54
HMBOX1-211ENST00000524238 KLRB1Q12918 225 aa5.45□□□□□ -1.54
HMBOX1-211ENST00000524238 ZNF625Q96I27 306 aaPredicted RBP5.45□□□□□ -1.54
HMBOX1-211ENST00000524238 DSPP15924 2871 aaKnown RBP5.45□□□□□ -1.54
HMBOX1-211ENST00000524238 ZZEF1O43149 2961 aa5.45□□□□□ -1.54
HMBOX1-211ENST00000524238 LOC107984640A0A0U1RRK4 108 aa5.45□□□□□ -1.54
HMBOX1-211ENST00000524238 hADV29S1A0JD25 119 aa5.45□□□□□ -1.54
HMBOX1-211ENST00000524238 SMIM1B2RUZ4 78 aa5.45□□□□□ -1.54
HMBOX1-211ENST00000524238 H3BUX3 64 aa5.45□□□□□ -1.54
HMBOX1-211ENST00000524238 K7ENP7 123 aa5.45□□□□□ -1.54
HMBOX1-211ENST00000524238 LINC00242Q5T6M2 205 aa5.45□□□□□ -1.54
HMBOX1-211ENST00000524238 KLK5Q9Y337 293 aaPredicted RBP5.45□□□□□ -1.54
HMBOX1-211ENST00000524238 TPRP12270 2363 aaKnown RBP5.44□□□□□ -1.54
HMBOX1-211ENST00000524238 IGHV3-73A0A0B4J1V6 119 aa5.44□□□□□ -1.54
HMBOX1-211ENST00000524238 RBMY1BA6NDE4 496 aaKnown RBP5.44□□□□□ -1.54
HMBOX1-211ENST00000524238 RBMY1EA6NEQ0 496 aaKnown RBP5.44□□□□□ -1.54
HMBOX1-211ENST00000524238 RS1O15537 224 aa5.44□□□□□ -1.54
HMBOX1-211ENST00000524238 NDUFC2O95298 119 aa5.44□□□□□ -1.54
HMBOX1-211ENST00000524238 RBMY1DP0C7P1 496 aaKnown RBP5.44□□□□□ -1.54
HMBOX1-211ENST00000524238 RBMY1A1P0DJD3 496 aaKnown RBP5.44□□□□□ -1.54
HMBOX1-211ENST00000524238 RBMY1CP0DJD4 496 aa5.44□□□□□ -1.54
HMBOX1-211ENST00000524238 PSMB8P28062 276 aa5.44□□□□□ -1.54
HMBOX1-211ENST00000524238 ADORA2A-AS1P86434 159 aa5.44□□□□□ -1.54
HMBOX1-211ENST00000524238 LY6EQ16553 131 aa5.44□□□□□ -1.54
HMBOX1-211ENST00000524238 DPH3Q96FX2 82 aa5.44□□□□□ -1.54
HMBOX1-211ENST00000524238 OBSCN-AS1Q96MR7 158 aa5.44□□□□□ -1.54
HMBOX1-211ENST00000524238 IGHV3OR16-12A0A075B7B8 117 aa5.43□□□□□ -1.54
HMBOX1-211ENST00000524238 TRBV10-1A0A0K0K1A3 114 aa5.43□□□□□ -1.54
HMBOX1-211ENST00000524238 SOSTDC1Q6X4U4 206 aa5.43□□□□□ -1.54
HMBOX1-211ENST00000524238 Q8N2B8 174 aa5.43□□□□□ -1.54
HMBOX1-211ENST00000524238 C22orf24Q9Y442 160 aa5.43□□□□□ -1.54
HMBOX1-211ENST00000524238 TRIOBPQ9H2D6 2365 aa5.43□□□□□ -1.54
HMBOX1-211ENST00000524238 TRAV25A0A0B4J276 109 aa5.43□□□□□ -1.54
HMBOX1-211ENST00000524238 JMJD7-PLA2G4BH0Y9G9 81 aa5.43□□□□□ -1.54
HMBOX1-211ENST00000524238 BCE1O60756 84 aa5.43□□□□□ -1.54
HMBOX1-211ENST00000524238 RPL36AP83881 106 aaKnown RBP5.43□□□□□ -1.54
HMBOX1-211ENST00000524238 RPL36ALQ969Q0 106 aaKnown RBP5.43□□□□□ -1.54
HMBOX1-211ENST00000524238 NCOR1O75376 2440 aa5.42□□□□□ -1.54
HMBOX1-211ENST00000524238 RP1L1Q8IWN7 2480 aaPredicted RBP5.42□□□□□ -1.54
HMBOX1-211ENST00000524238 TRAV13-1A0A0B4J241 112 aa5.42□□□□□ -1.54
HMBOX1-211ENST00000524238 TRBV10-3A0A0K0K1G6 114 aa5.42□□□□□ -1.54
HMBOX1-211ENST00000524238 USP17L23D6RBM5 183 aa5.42□□□□□ -1.54
HMBOX1-211ENST00000524238 SYNJ2BPP57105 145 aa5.42□□□□□ -1.54
HMBOX1-211ENST00000524238 PROK1P58294 105 aa5.42□□□□□ -1.54
HMBOX1-211ENST00000524238 BLCAPP62952 87 aa5.42□□□□□ -1.54
HMBOX1-211ENST00000524238 COX6A2Q02221 97 aa5.42□□□□□ -1.54
HMBOX1-211ENST00000524238 BRD3OSQ6XYD6 125 aa5.42□□□□□ -1.54
HMBOX1-211ENST00000524238 FAM218AQ96MZ4 157 aa5.42□□□□□ -1.54
HMBOX1-211ENST00000524238 UPK3BQ9BT76 320 aa5.42□□□□□ -1.54
HMBOX1-211ENST00000524238 SND1-IT1Q9HBX3 110 aa5.42□□□□□ -1.54
HMBOX1-211ENST00000524238 PCNX1Q96RV3 2341 aa5.42□□□□□ -1.54
HMBOX1-211ENST00000524238 APC2O95996 2303 aa5.41□□□□□ -1.54
HMBOX1-211ENST00000524238 A0A0U1RRA0 63 aa5.41□□□□□ -1.54
HMBOX1-211ENST00000524238 INSP01308 110 aa5.41□□□□□ -1.54
HMBOX1-211ENST00000524238 HTN1P15515 57 aa5.41□□□□□ -1.54
HMBOX1-211ENST00000524238 ATP5J2P56134 94 aa5.41□□□□□ -1.54
HMBOX1-211ENST00000524238 ORMDL1Q9P0S3 153 aa5.41□□□□□ -1.54
HMBOX1-211ENST00000524238 PRRC2CQ9Y520 2896 aaKnown RBP5.41□□□□□ -1.54
HMBOX1-211ENST00000524238 KNCNA6PVL3 124 aa5.4□□□□□ -1.54
HMBOX1-211ENST00000524238 F5H768 121 aa5.4□□□□□ -1.54
HMBOX1-211ENST00000524238 UBE2L6O14933 153 aa5.4□□□□□ -1.54
HMBOX1-211ENST00000524238 EDN2P20800 178 aa5.4□□□□□ -1.54
HMBOX1-211ENST00000524238 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.4□□□□□ -1.54
HMBOX1-211ENST00000524238 MRAPQ8TCY5 172 aa5.4□□□□□ -1.54
HMBOX1-211ENST00000524238 COX7B2Q8TF08 81 aa5.4□□□□□ -1.54
HMBOX1-211ENST00000524238 Q9HAA7 133 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms