RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 TPRXLQ17RH7 258 aa10.32□□□□□ -0.76
PVT1-220ENST00000524165 TSKUQ8WUA8 353 aa10.32□□□□□ -0.76
PVT1-220ENST00000524165 BCL2P10415 239 aa10.31□□□□□ -0.76
PVT1-220ENST00000524165 CAMPP49913 170 aa10.31□□□□□ -0.76
PVT1-220ENST00000524165 UBE2G1P62253 170 aa10.31□□□□□ -0.76
PVT1-220ENST00000524165 COTL1Q14019 142 aa10.31□□□□□ -0.76
PVT1-220ENST00000524165 SUMO4Q6EEV6 95 aa10.31□□□□□ -0.76
PVT1-220ENST00000524165 APOMO95445 188 aa10.3□□□□□ -0.76
PVT1-220ENST00000524165 LTAP01374 205 aa10.3□□□□□ -0.76
PVT1-220ENST00000524165 XCL1P47992 114 aa10.3□□□□□ -0.76
PVT1-220ENST00000524165 NKX6-2Q9C056 277 aaPredicted RBP10.3□□□□□ -0.76
PVT1-220ENST00000524165 MGPP08493 103 aa10.29□□□□□ -0.76
PVT1-220ENST00000524165 SSTP61278 116 aa10.29□□□□□ -0.76
PVT1-220ENST00000524165 AMMECR1LQ6DCA0 310 aa10.29□□□□□ -0.76
PVT1-220ENST00000524165 RASL11AQ6T310 242 aa10.29□□□□□ -0.76
PVT1-220ENST00000524165 KRTAP11-1Q8IUC1 163 aa10.29□□□□□ -0.76
PVT1-220ENST00000524165 PPP1R1CQ8WVI7 109 aa10.29□□□□□ -0.76
PVT1-220ENST00000524165 IGLV4-69A0A075B6H9 119 aa10.28□□□□□ -0.76
PVT1-220ENST00000524165 MBP02144 154 aa10.28□□□□□ -0.76
PVT1-220ENST00000524165 DEFA3P59666 94 aa10.28□□□□□ -0.76
PVT1-220ENST00000524165 NUP35Q8NFH5 326 aa10.28□□□□□ -0.76
PVT1-220ENST00000524165 OR5A1Q8NGJ0 315 aa10.28□□□□□ -0.76
PVT1-220ENST00000524165 RPP21Q9H633 154 aaKnown RBP10.28□□□□□ -0.76
PVT1-220ENST00000524165 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.27□□□□□ -0.77
PVT1-220ENST00000524165 CCL25O15444 150 aa10.27□□□□□ -0.77
PVT1-220ENST00000524165 PET100P0DJ07 73 aa10.27□□□□□ -0.77
PVT1-220ENST00000524165 MEF2BQ02080 365 aaPredicted RBP10.27□□□□□ -0.77
PVT1-220ENST00000524165 ACTR3CQ9C0K3 210 aaPredicted RBP10.27□□□□□ -0.77
PVT1-220ENST00000524165 NIT2Q9NQR4 276 aa10.27□□□□□ -0.77
PVT1-220ENST00000524165 UBE2G2P60604 165 aa10.26□□□□□ -0.77
PVT1-220ENST00000524165 RPL18AQ02543 176 aaKnown RBP10.26□□□□□ -0.77
PVT1-220ENST00000524165 PSMG3Q9BT73 122 aaPredicted RBP10.26□□□□□ -0.77
PVT1-220ENST00000524165 FAM74A7A6NL05 159 aa10.25□□□□□ -0.77
PVT1-220ENST00000524165 H7C423 109 aa10.25□□□□□ -0.77
PVT1-220ENST00000524165 MPC2O95563 127 aa10.25□□□□□ -0.77
PVT1-220ENST00000524165 ATP6V0CP27449 155 aa10.25□□□□□ -0.77
PVT1-220ENST00000524165 RNASEKQ6P5S7 137 aaKnown RBP10.25□□□□□ -0.77
PVT1-220ENST00000524165 LINC00959A0A1B0GUT2 108 aa10.24□□□□□ -0.77
PVT1-220ENST00000524165 KRTAP9-7A8MTY7 169 aa10.24□□□□□ -0.77
PVT1-220ENST00000524165 SERF2P84101 59 aa10.24□□□□□ -0.77
PVT1-220ENST00000524165 CRYGAP11844 174 aa10.23□□□□□ -0.77
PVT1-220ENST00000524165 CD164L2Q6UWJ8 174 aa10.23□□□□□ -0.77
PVT1-220ENST00000524165 CAMK2N2Q96S95 79 aa10.23□□□□□ -0.77
PVT1-220ENST00000524165 ZNF25P17030 456 aaPredicted RBP10.22□□□□□ -0.77
PVT1-220ENST00000524165 H2BFSP57053 126 aa10.22□□□□□ -0.77
PVT1-220ENST00000524165 EIF5AL1Q6IS14 154 aaKnown RBP10.22□□□□□ -0.77
PVT1-220ENST00000524165 RETNLBQ9BQ08 111 aa10.22□□□□□ -0.77
PVT1-220ENST00000524165 TNFSF18Q9UNG2 199 aa10.22□□□□□ -0.77
PVT1-220ENST00000524165 NTF3P20783 257 aa10.21□□□□□ -0.77
PVT1-220ENST00000524165 TCEAL7Q9BRU2 100 aa10.21□□□□□ -0.77
PVT1-220ENST00000524165 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.2□□□□□ -0.78
PVT1-220ENST00000524165 IGKV2-29A2NJV5 120 aaPredicted RBP10.2□□□□□ -0.78
PVT1-220ENST00000524165 NCR2O95944 276 aa10.2□□□□□ -0.78
PVT1-220ENST00000524165 SS18Q15532 418 aa10.2□□□□□ -0.78
PVT1-220ENST00000524165 C2orf48Q96LS8 159 aa10.2□□□□□ -0.78
PVT1-220ENST00000524165 IGLV7-46A0A075B6I9 117 aa10.19□□□□□ -0.78
PVT1-220ENST00000524165 FAM240BA0A1B0GVZ2 78 aa10.19□□□□□ -0.78
PVT1-220ENST00000524165 RNF151Q2KHN1 245 aa10.19□□□□□ -0.78
PVT1-220ENST00000524165 FAM168BA1KXE4 195 aa10.18□□□□□ -0.78
PVT1-220ENST00000524165 CCDC160A6NGH7 325 aa10.18□□□□□ -0.78
PVT1-220ENST00000524165 BCL2L11O43521 198 aa10.18□□□□□ -0.78
PVT1-220ENST00000524165 ESDP10768 282 aa10.18□□□□□ -0.78
PVT1-220ENST00000524165 TYMSOSQ8TAI1 123 aa10.18□□□□□ -0.78
PVT1-220ENST00000524165 A0A087X002 238 aa10.17□□□□□ -0.78
PVT1-220ENST00000524165 C19orf71A6NCJ1 209 aa10.17□□□□□ -0.78
PVT1-220ENST00000524165 MALP21145 153 aa10.17□□□□□ -0.78
PVT1-220ENST00000524165 AKR1C3P42330 323 aa10.17□□□□□ -0.78
PVT1-220ENST00000524165 ZNF726P1Q15940 193 aa10.17□□□□□ -0.78
PVT1-220ENST00000524165 Q6ZNX1 250 aa10.17□□□□□ -0.78
PVT1-220ENST00000524165 TMEM101Q96IK0 257 aa10.17□□□□□ -0.78
PVT1-220ENST00000524165 BTF3L4Q96K17 158 aa10.17□□□□□ -0.78
PVT1-220ENST00000524165 OPRPNQ99935 248 aaPredicted RBP10.17□□□□□ -0.78
PVT1-220ENST00000524165 CTXND1A0A1B0GTU2 59 aa10.16□□□□□ -0.78
PVT1-220ENST00000524165 ZNF861PO60384 105 aa10.16□□□□□ -0.78
PVT1-220ENST00000524165 APCSP02743 223 aa10.16□□□□□ -0.78
PVT1-220ENST00000524165 CCDC32Q9BV29 185 aa10.16□□□□□ -0.78
PVT1-220ENST00000524165 FHITP49789 147 aa10.15□□□□□ -0.78
PVT1-220ENST00000524165 UBE2BP63146 152 aa10.15□□□□□ -0.78
PVT1-220ENST00000524165 FAM19A5Q7Z5A7 132 aaPredicted RBP10.15□□□□□ -0.78
PVT1-220ENST00000524165 S100A9P06702 114 aaKnown RBP10.14□□□□□ -0.79
PVT1-220ENST00000524165 IGLC6P0CF74 106 aa10.14□□□□□ -0.79
PVT1-220ENST00000524165 STOML3Q8TAV4 291 aa10.14□□□□□ -0.79
PVT1-220ENST00000524165 COX7A2LO14548 114 aa10.13□□□□□ -0.79
PVT1-220ENST00000524165 TRGC1P0CF51 173 aa10.13□□□□□ -0.79
PVT1-220ENST00000524165 LINC00173Q6ZV60 143 aa10.13□□□□□ -0.79
PVT1-220ENST00000524165 IMMP2LQ96T52 175 aa10.13□□□□□ -0.79
PVT1-220ENST00000524165 TPPP3Q9BW30 176 aa10.13□□□□□ -0.79
PVT1-220ENST00000524165 ASB16-AS1Q495Z4 193 aa10.12□□□□□ -0.79
PVT1-220ENST00000524165 M0QXV9 152 aa10.11□□□□□ -0.79
PVT1-220ENST00000524165 CST9LP1Q5W188 147 aa10.11□□□□□ -0.79
PVT1-220ENST00000524165 BAGE2Q86Y30 109 aa10.11□□□□□ -0.79
PVT1-220ENST00000524165 KRTAP7-1Q8IUC3 87 aa10.11□□□□□ -0.79
PVT1-220ENST00000524165 OR2D3Q8NGH3 330 aa10.11□□□□□ -0.79
PVT1-220ENST00000524165 MRPL35Q9NZE8 188 aaKnown RBP10.11□□□□□ -0.79
PVT1-220ENST00000524165 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.1□□□□□ -0.79
PVT1-220ENST00000524165 G3V3Q6 166 aa10.1□□□□□ -0.79
PVT1-220ENST00000524165 TLX1NBP0CAT3 122 aa10.1□□□□□ -0.79
PVT1-220ENST00000524165 MZT2BQ6NZ67 158 aa10.1□□□□□ -0.79
PVT1-220ENST00000524165 KRTAP4-1Q9BYQ7 146 aa10.1□□□□□ -0.79
PVT1-220ENST00000524165 CDC42SE2Q9NRR3 84 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms