RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 PIMREGQ9BSJ6 248 aa7.52□□□□□ -1.21
SPIDR-225ENST00000524141 PSMB8P28062 276 aa7.52□□□□□ -1.21
SPIDR-225ENST00000524141 PIK3CD-AS1Q5SR53 167 aa7.52□□□□□ -1.21
SPIDR-225ENST00000524141 CEP295Q9C0D2 2601 aa7.51□□□□□ -1.21
SPIDR-225ENST00000524141 SPTAN1Q13813 2472 aaKnown RBP7.51□□□□□ -1.21
SPIDR-225ENST00000524141 TRBV7-7A0A0K0K1E9 115 aa7.51□□□□□ -1.21
SPIDR-225ENST00000524141 ACYP1P07311 99 aa7.51□□□□□ -1.21
SPIDR-225ENST00000524141 CIRBPQ14011 172 aaKnown RBP7.51□□□□□ -1.21
SPIDR-225ENST00000524141 CEMP1Q6PRD7 247 aaPredicted RBP7.51□□□□□ -1.21
SPIDR-225ENST00000524141 UBE2D4Q9Y2X8 147 aa7.51□□□□□ -1.21
SPIDR-225ENST00000524141 AKAP6Q13023 2319 aa7.51□□□□□ -1.21
SPIDR-225ENST00000524141 TMEM89A2RUT3 159 aa7.5□□□□□ -1.21
SPIDR-225ENST00000524141 NDUFA1O15239 70 aa7.5□□□□□ -1.21
SPIDR-225ENST00000524141 COPS9Q8WXC6 57 aa7.5□□□□□ -1.21
SPIDR-225ENST00000524141 TMEM101Q96IK0 257 aa7.5□□□□□ -1.21
SPIDR-225ENST00000524141 DOPEY2Q9Y3R5 2298 aa7.5□□□□□ -1.21
SPIDR-225ENST00000524141 NPC2P61916 151 aa7.5□□□□□ -1.21
SPIDR-225ENST00000524141 IMUPQ9GZP8 106 aa7.5□□□□□ -1.21
SPIDR-225ENST00000524141 IGHV4-61A0A0C4DH41 118 aa7.49□□□□□ -1.21
SPIDR-225ENST00000524141 RNASE13Q5GAN3 156 aaKnown RBP7.49□□□□□ -1.21
SPIDR-225ENST00000524141 DUX3Q96PT4 197 aa7.49□□□□□ -1.21
SPIDR-225ENST00000524141 CHCHD7Q9BUK0 85 aa7.49□□□□□ -1.21
SPIDR-225ENST00000524141 IGHV3-73A0A0B4J1V6 119 aa7.49□□□□□ -1.21
SPIDR-225ENST00000524141 TIRAPP58753 221 aa7.49□□□□□ -1.21
SPIDR-225ENST00000524141 FAM110AQ9BQ89 295 aa7.49□□□□□ -1.21
SPIDR-225ENST00000524141 HIVEP3Q5T1R4 2406 aa7.49□□□□□ -1.21
SPIDR-225ENST00000524141 IGLV5-45A0A087WSX0 123 aa7.48□□□□□ -1.21
SPIDR-225ENST00000524141 Q6ZSV7 163 aa7.48□□□□□ -1.21
SPIDR-225ENST00000524141 DNAJC30Q96LL9 226 aa7.48□□□□□ -1.21
SPIDR-225ENST00000524141 A8MZ25 164 aa7.48□□□□□ -1.21
SPIDR-225ENST00000524141 ZFHX3Q15911 3703 aa7.48□□□□□ -1.21
SPIDR-225ENST00000524141 ZNF415Q09FC8 603 aa7.48□□□□□ -1.21
SPIDR-225ENST00000524141 MEIG1Q5JSS6 88 aa7.48□□□□□ -1.21
SPIDR-225ENST00000524141 PROK1P58294 105 aa7.47□□□□□ -1.21
SPIDR-225ENST00000524141 TMEM95Q3KNT9 176 aa7.47□□□□□ -1.21
SPIDR-225ENST00000524141 C10orf105Q8TEF2 133 aa7.47□□□□□ -1.21
SPIDR-225ENST00000524141 CDKN2A-AS1Q9UH64 79 aa7.47□□□□□ -1.21
SPIDR-225ENST00000524141 NACAE9PAV3 2078 aa7.47□□□□□ -1.21
SPIDR-225ENST00000524141 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.47□□□□□ -1.21
SPIDR-225ENST00000524141 IGKV2-29A2NJV5 120 aaPredicted RBP7.47□□□□□ -1.21
SPIDR-225ENST00000524141 COX7A2LO14548 114 aa7.47□□□□□ -1.21
SPIDR-225ENST00000524141 HTN1P15515 57 aa7.47□□□□□ -1.21
SPIDR-225ENST00000524141 SYNJ2BPP57105 145 aa7.47□□□□□ -1.21
SPIDR-225ENST00000524141 CITED2Q99967 270 aaPredicted RBP7.47□□□□□ -1.21
SPIDR-225ENST00000524141 LINC00467Q9BRT7 94 aa7.47□□□□□ -1.21
SPIDR-225ENST00000524141 PRORYQ9H606 182 aa7.47□□□□□ -1.21
SPIDR-225ENST00000524141 MSMBP08118 114 aa7.46□□□□□ -1.21
SPIDR-225ENST00000524141 RBMY1A1P0DJD3 496 aaKnown RBP7.46□□□□□ -1.21
SPIDR-225ENST00000524141 RBMY1CP0DJD4 496 aa7.46□□□□□ -1.21
SPIDR-225ENST00000524141 RBMY1FQ15415 496 aaKnown RBP7.46□□□□□ -1.21
SPIDR-225ENST00000524141 LINC00308Q8TCZ7 52 aa7.46□□□□□ -1.21
SPIDR-225ENST00000524141 TMEM126AQ9H061 195 aa7.46□□□□□ -1.21
SPIDR-225ENST00000524141 HERVK_113P63121 156 aa7.46□□□□□ -1.22
SPIDR-225ENST00000524141 MUC6Q6W4X9 2439 aa7.45□□□□□ -1.22
SPIDR-225ENST00000524141 A8MTW9 85 aa7.45□□□□□ -1.22
SPIDR-225ENST00000524141 IGHV3-53P01767 116 aa7.45□□□□□ -1.22
SPIDR-225ENST00000524141 DGAT2L7PQ6IED9 249 aa7.45□□□□□ -1.22
SPIDR-225ENST00000524141 SMIM20Q8N5G0 67 aa7.45□□□□□ -1.22
SPIDR-225ENST00000524141 DAND5Q8N907 189 aa7.45□□□□□ -1.22
SPIDR-225ENST00000524141 IGLV5-39A0A0G2JS06 123 aa7.45□□□□□ -1.22
SPIDR-225ENST00000524141 SORL1Q92673 2214 aa7.45□□□□□ -1.22
SPIDR-225ENST00000524141 ATRXP46100 2492 aa7.44□□□□□ -1.22
SPIDR-225ENST00000524141 KNCNA6PVL3 124 aa7.44□□□□□ -1.22
SPIDR-225ENST00000524141 TRACP01848 142 aa7.44□□□□□ -1.22
SPIDR-225ENST00000524141 LINC00643Q86TS7 51 aa7.44□□□□□ -1.22
SPIDR-225ENST00000524141 CHCHD5Q9BSY4 110 aa7.44□□□□□ -1.22
SPIDR-225ENST00000524141 Q9H8V8 135 aa7.44□□□□□ -1.22
SPIDR-225ENST00000524141 SHISA2Q6UWI4 295 aa7.44□□□□□ -1.22
SPIDR-225ENST00000524141 ATP5G1P05496 136 aa7.43□□□□□ -1.22
SPIDR-225ENST00000524141 HOXD3P31249 432 aaPredicted RBP7.43□□□□□ -1.22
SPIDR-225ENST00000524141 Q6ZSN1 163 aa7.43□□□□□ -1.22
SPIDR-225ENST00000524141 FAM236AA0A1B0GUQ0 79 aa7.43□□□□□ -1.22
SPIDR-225ENST00000524141 FAM236BA0A1B0GV22 79 aa7.43□□□□□ -1.22
SPIDR-225ENST00000524141 DUX5Q96PT3 197 aa7.43□□□□□ -1.22
SPIDR-225ENST00000524141 CCL19Q99731 98 aa7.43□□□□□ -1.22
SPIDR-225ENST00000524141 PPDPFQ9H3Y8 114 aa7.43□□□□□ -1.22
SPIDR-225ENST00000524141 C10orf99Q6UWK7 81 aa7.42□□□□□ -1.22
SPIDR-225ENST00000524141 Q9UF83 564 aa7.42□□□□□ -1.22
SPIDR-225ENST00000524141 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.42□□□□□ -1.224e-7■■■■□ 26.6
SPIDR-225ENST00000524141 B4DSR2 109 aa7.42□□□□□ -1.22
SPIDR-225ENST00000524141 C19orf84I3L1E1 186 aa7.42□□□□□ -1.22
SPIDR-225ENST00000524141 DEFB131AP59861 70 aa7.42□□□□□ -1.22
SPIDR-225ENST00000524141 FAM19A3Q7Z5A8 133 aa7.42□□□□□ -1.22
SPIDR-225ENST00000524141 CELSR1Q9NYQ6 3014 aa7.42□□□□□ -1.22
SPIDR-225ENST00000524141 IGHV3-38A0A0C4DH36 116 aa7.42□□□□□ -1.22
SPIDR-225ENST00000524141 IGHV4-59P01825 116 aa7.42□□□□□ -1.22
SPIDR-225ENST00000524141 HERV-K104P63124 156 aa7.42□□□□□ -1.22
SPIDR-225ENST00000524141 LY6DQ14210 128 aa7.42□□□□□ -1.22
SPIDR-225ENST00000524141 BEAN1Q3B7T3 259 aa7.42□□□□□ -1.22
SPIDR-225ENST00000524141 FAM222AQ5U5X8 452 aa7.42□□□□□ -1.22
SPIDR-225ENST00000524141 IGHV3OR16-12A0A075B7B8 117 aa7.41□□□□□ -1.22
SPIDR-225ENST00000524141 IGHV4-30-2A0A087WSY4 118 aa7.41□□□□□ -1.22
SPIDR-225ENST00000524141 INAFM2P0DMQ5 153 aa7.41□□□□□ -1.22
SPIDR-225ENST00000524141 DAZ2Q13117 558 aaKnown RBP7.41□□□□□ -1.22
SPIDR-225ENST00000524141 LINC00242Q5T6M2 205 aa7.41□□□□□ -1.22
SPIDR-225ENST00000524141 DAZ4Q86SG3 579 aaKnown RBP7.41□□□□□ -1.22
SPIDR-225ENST00000524141 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.41□□□□□ -1.22
SPIDR-225ENST00000524141 UBE2E2Q96LR5 201 aa7.41□□□□□ -1.22
SPIDR-225ENST00000524141 DAZ3Q9NR90 486 aaKnown RBP7.41□□□□□ -1.22
SPIDR-225ENST00000524141 ATP5J2P56134 94 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 348.5 ms