RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	SPRY2	O43597	315 aa		5.77	□□□□□ -1.49
SPIDR-223	ENST00000524033	IGHV3-30	P01768	117 aa		5.77	□□□□□ -1.49
SPIDR-223	ENST00000524033	MGP	P08493	103 aa		5.77	□□□□□ -1.49
SPIDR-223	ENST00000524033	IGHV3-30-5	P0DP03	117 aa		5.77	□□□□□ -1.49
SPIDR-223	ENST00000524033	FOXI1	Q12951	378 aa		5.77	□□□□□ -1.49
SPIDR-223	ENST00000524033	HIST2H2BD	Q6DRA6	164 aa		5.77	□□□□□ -1.49
SPIDR-223	ENST00000524033	SUMO4	Q6EEV6	95 aa		5.77	□□□□□ -1.49
SPIDR-223	ENST00000524033	ZFP2	Q6ZN57	461 aa		5.77	□□□□□ -1.49
SPIDR-223	ENST00000524033	NFE4	Q86UQ8	179 aa		5.77	□□□□□ -1.49
SPIDR-223	ENST00000524033	TMEM219	Q86XT9	240 aa		5.77	□□□□□ -1.49
SPIDR-223	ENST00000524033	C14orf178	Q8N769	122 aa	Predicted RBP	5.77	□□□□□ -1.49
SPIDR-223	ENST00000524033	USMG5	Q96IX5	58 aa		5.77	□□□□□ -1.49
SPIDR-223	ENST00000524033	ODF3	Q96PU9	254 aa		5.77	□□□□□ -1.49
SPIDR-223	ENST00000524033	KLK15	Q9H2R5	256 aa		5.77	□□□□□ -1.49
SPIDR-223	ENST00000524033	PHLDA3	Q9Y5J5	127 aa		5.77	□□□□□ -1.49
SPIDR-223	ENST00000524033	TRBV27	A0A0K0K1C4	114 aa		5.76	□□□□□ -1.49
SPIDR-223	ENST00000524033		A6NDX4	124 aa		5.76	□□□□□ -1.49
SPIDR-223	ENST00000524033	GNRH2	O43555	120 aa		5.76	□□□□□ -1.49
SPIDR-223	ENST00000524033	IGHG2	P01859	326 aa		5.76	□□□□□ -1.49
SPIDR-223	ENST00000524033	CD28	P10747	220 aa		5.76	□□□□□ -1.49
SPIDR-223	ENST00000524033	S100A4	P26447	101 aa	Known RBP	5.76	□□□□□ -1.49
SPIDR-223	ENST00000524033	DEFB1	P60022	68 aa		5.76	□□□□□ -1.49
SPIDR-223	ENST00000524033	HERVK_113	P61574	105 aa		5.76	□□□□□ -1.49
SPIDR-223	ENST00000524033	BLCAP	P62952	87 aa		5.76	□□□□□ -1.49
SPIDR-223	ENST00000524033	CFHR3	Q02985	330 aa		5.76	□□□□□ -1.49
SPIDR-223	ENST00000524033	SMAGP	Q0VAQ4	97 aa		5.76	□□□□□ -1.49
SPIDR-223	ENST00000524033	FHL3	Q13643	280 aa		5.76	□□□□□ -1.49
SPIDR-223	ENST00000524033	PMVK	Q15126	192 aa		5.76	□□□□□ -1.49
SPIDR-223	ENST00000524033	RHOH	Q15669	191 aa		5.76	□□□□□ -1.49
SPIDR-223	ENST00000524033	NSUN5P1	Q3KNT7	163 aa		5.76	□□□□□ -1.49
SPIDR-223	ENST00000524033	ZNF876P	Q49A33	203 aa		5.76	□□□□□ -1.49
SPIDR-223	ENST00000524033	LYRM7	Q5U5X0	104 aa		5.76	□□□□□ -1.49
SPIDR-223	ENST00000524033	NDUFA11	Q86Y39	141 aa		5.76	□□□□□ -1.49
SPIDR-223	ENST00000524033		Q8N2B8	174 aa		5.76	□□□□□ -1.49
SPIDR-223	ENST00000524033	MTURN	Q8N3F0	131 aa		5.76	□□□□□ -1.49
SPIDR-223	ENST00000524033	CARD19	Q96LW7	228 aa		5.76	□□□□□ -1.49
SPIDR-223	ENST00000524033	ZNF702P	Q9H963	129 aa		5.76	□□□□□ -1.49
SPIDR-223	ENST00000524033	ZNF580	Q9UK33	172 aa		5.76	□□□□□ -1.49
SPIDR-223	ENST00000524033	TP53TG1	Q9Y2A0	90 aa		5.76	□□□□□ -1.49
SPIDR-223	ENST00000524033		A0A1B0GV72	72 aa		5.75	□□□□□ -1.49
SPIDR-223	ENST00000524033		F6UB75	175 aa		5.75	□□□□□ -1.49
SPIDR-223	ENST00000524033	APOM	O95445	188 aa		5.75	□□□□□ -1.49
SPIDR-223	ENST00000524033	RNASE4	P34096	147 aa	Known RBP	5.75	□□□□□ -1.49
SPIDR-223	ENST00000524033	KRTAP19-4	Q3LI73	84 aa		5.75	□□□□□ -1.49
SPIDR-223	ENST00000524033	RNF152	Q8N8N0	203 aa		5.75	□□□□□ -1.49
SPIDR-223	ENST00000524033	SLC25A29	Q8N8R3	303 aa		5.75	□□□□□ -1.49
SPIDR-223	ENST00000524033	PPDPFL	Q8WWR9	84 aa		5.75	□□□□□ -1.49
SPIDR-223	ENST00000524033	MRPL16	Q9NX20	251 aa	Known RBP	5.75	□□□□□ -1.49
SPIDR-223	ENST00000524033	IGHV3-16	A0A0C4DH30	117 aa		5.74	□□□□□ -1.49
SPIDR-223	ENST00000524033		A0A0J9YX75	114 aa		5.74	□□□□□ -1.49
SPIDR-223	ENST00000524033	TMEM223	A0PJW6	202 aa		5.74	□□□□□ -1.49
SPIDR-223	ENST00000524033		J3KRW8	73 aa		5.74	□□□□□ -1.49
SPIDR-223	ENST00000524033		K7EMT4	169 aa		5.74	□□□□□ -1.49
SPIDR-223	ENST00000524033	VCY	O14598	125 aa		5.74	□□□□□ -1.49
SPIDR-223	ENST00000524033	LEPROT	O15243	131 aa		5.74	□□□□□ -1.49
SPIDR-223	ENST00000524033	TCL1B	O95988	128 aa		5.74	□□□□□ -1.49
SPIDR-223	ENST00000524033	PRB2	P02812	416 aa	Predicted RBP	5.74	□□□□□ -1.49
SPIDR-223	ENST00000524033	CFC1B	P0CG36	223 aa		5.74	□□□□□ -1.49
SPIDR-223	ENST00000524033	CFC1	P0CG37	223 aa		5.74	□□□□□ -1.49
SPIDR-223	ENST00000524033	CRYBA4	P53673	196 aa		5.74	□□□□□ -1.49
SPIDR-223	ENST00000524033	BEAN1	Q3B7T3	259 aa		5.74	□□□□□ -1.49
SPIDR-223	ENST00000524033	KPRP	Q5T749	579 aa	Predicted RBP	5.74	□□□□□ -1.49
SPIDR-223	ENST00000524033	TEN1	Q86WV5	123 aa		5.74	□□□□□ -1.49
SPIDR-223	ENST00000524033	C10orf126	Q8N4M7	172 aa		5.74	□□□□□ -1.49
SPIDR-223	ENST00000524033	KLHL30-AS1	Q8NEE0	82 aa		5.74	□□□□□ -1.49
SPIDR-223	ENST00000524033	ZNRF2	Q8NHG8	242 aa		5.74	□□□□□ -1.49
SPIDR-223	ENST00000524033	CITED2	Q99967	270 aa	Predicted RBP	5.74	□□□□□ -1.49
SPIDR-223	ENST00000524033	EDA2R	Q9HAV5	297 aa		5.74	□□□□□ -1.49
SPIDR-223	ENST00000524033	ZNF256	Q9Y2P7	627 aa	Predicted RBP	5.74	□□□□□ -1.49
SPIDR-223	ENST00000524033	TRBV20-1	A0A075B6N2	111 aa		5.73	□□□□□ -1.49
SPIDR-223	ENST00000524033		A0A0B4J2C4	111 aa		5.73	□□□□□ -1.49
SPIDR-223	ENST00000524033		B5MCH6	92 aa		5.73	□□□□□ -1.49
SPIDR-223	ENST00000524033	RPL39	P62891	51 aa	Known RBP	5.73	□□□□□ -1.49
SPIDR-223	ENST00000524033	SCGB1D4	Q6XE38	83 aa		5.73	□□□□□ -1.49
SPIDR-223	ENST00000524033	DCANP1	Q8TF63	244 aa		5.73	□□□□□ -1.49
SPIDR-223	ENST00000524033	RHPN1-AS1	Q9BWJ2	59 aa		5.73	□□□□□ -1.49
SPIDR-223	ENST00000524033	JPT2	Q9H910	190 aa		5.73	□□□□□ -1.49
SPIDR-223	ENST00000524033	MDFIC	Q9P1T7	246 aa		5.73	□□□□□ -1.49
SPIDR-223	ENST00000524033	LINC00527	Q9UJ94	153 aa		5.73	□□□□□ -1.49
SPIDR-223	ENST00000524033	NBEAL2	Q6ZNJ1	2754 aa		5.72	□□□□□ -1.49
SPIDR-223	ENST00000524033	SDHAF1	A6NFY7	115 aa		5.72	□□□□□ -1.49
SPIDR-223	ENST00000524033		J3QQQ9	107 aa		5.72	□□□□□ -1.49
SPIDR-223	ENST00000524033	IGHV3-33	P01772	117 aa		5.72	□□□□□ -1.49
SPIDR-223	ENST00000524033		P0DMU3	169 aa		5.72	□□□□□ -1.49
SPIDR-223	ENST00000524033	FAM231A	P0DMU4	169 aa		5.72	□□□□□ -1.49
SPIDR-223	ENST00000524033	FAM231C	P0DMU5	169 aa		5.72	□□□□□ -1.49
SPIDR-223	ENST00000524033	ZNF22	P17026	224 aa	Predicted RBP	5.72	□□□□□ -1.49
SPIDR-223	ENST00000524033	MAL	P21145	153 aa		5.72	□□□□□ -1.49
SPIDR-223	ENST00000524033	PSMB2	P49721	201 aa		5.72	□□□□□ -1.49
SPIDR-223	ENST00000524033	SRSF9	Q13242	221 aa	Known RBP eCLIP	5.72	□□□□□ -1.49
SPIDR-223	ENST00000524033		Q6ZUT4	128 aa		5.72	□□□□□ -1.49
SPIDR-223	ENST00000524033	TMEM263	Q8WUH6	116 aa	Known RBP	5.72	□□□□□ -1.49
SPIDR-223	ENST00000524033	VCX2	Q9H322	139 aa		5.72	□□□□□ -1.49
SPIDR-223	ENST00000524033	DAZ1	Q9NQZ3	744 aa	Known RBP	5.72	□□□□□ -1.49
SPIDR-223	ENST00000524033	COL7A1	Q02388	2944 aa		5.72	□□□□□ -1.49
SPIDR-223	ENST00000524033		A8MTW9	85 aa		5.71	□□□□□ -1.5
SPIDR-223	ENST00000524033		M0QY20	66 aa		5.71	□□□□□ -1.5
SPIDR-223	ENST00000524033		M0R2P5	195 aa		5.71	□□□□□ -1.5
SPIDR-223	ENST00000524033	MT-ATP8	P03928	68 aa		5.71	□□□□□ -1.5
SPIDR-223	ENST00000524033	EDN2	P20800	178 aa		5.71	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms