RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 COTL1Q14019 142 aa5.78□□□□□ -1.48
CTNNA1-240ENST00000523912 PEA15Q15121 130 aa5.78□□□□□ -1.48
CTNNA1-240ENST00000523912 TWIST1Q15672 202 aa5.78□□□□□ -1.48
CTNNA1-240ENST00000523912 DGAT2L7PQ6IED9 249 aa5.78□□□□□ -1.48
CTNNA1-240ENST00000523912 LYZL1Q6UWQ5 148 aa5.78□□□□□ -1.48
CTNNA1-240ENST00000523912 NTM-AS1Q6ZSK4 140 aa5.78□□□□□ -1.48
CTNNA1-240ENST00000523912 CLRN3Q8NCR9 226 aa5.78□□□□□ -1.48
CTNNA1-240ENST00000523912 PGLYRP4Q96LB8 373 aa5.78□□□□□ -1.48
CTNNA1-240ENST00000523912 RPP21Q9H633 154 aaKnown RBP5.78□□□□□ -1.48
CTNNA1-240ENST00000523912 SRP19P09132 144 aaKnown RBP5.77□□□□□ -1.49
CTNNA1-240ENST00000523912 CEBPGP53567 150 aa5.77□□□□□ -1.49
CTNNA1-240ENST00000523912 CIRBP-AS1Q8TBR5 109 aa5.77□□□□□ -1.49
CTNNA1-240ENST00000523912 NIT2Q9NQR4 276 aa5.77□□□□□ -1.49
CTNNA1-240ENST00000523912 AP5S1Q9NUS5 200 aa5.77□□□□□ -1.49
CTNNA1-240ENST00000523912 A0A1B0GUV1 79 aa5.76□□□□□ -1.49
CTNNA1-240ENST00000523912 hDV102S1A0JD36 115 aa5.76□□□□□ -1.49
CTNNA1-240ENST00000523912 NTF3P20783 257 aa5.76□□□□□ -1.49
CTNNA1-240ENST00000523912 NUDT10Q8NFP7 164 aa5.76□□□□□ -1.49
CTNNA1-240ENST00000523912 BORCS7Q96B45 105 aa5.76□□□□□ -1.49
CTNNA1-240ENST00000523912 NUDT11Q96G61 164 aa5.76□□□□□ -1.49
CTNNA1-240ENST00000523912 SMIM7Q9BQ49 75 aa5.76□□□□□ -1.49
CTNNA1-240ENST00000523912 CNFNQ9BYD5 112 aa5.76□□□□□ -1.49
CTNNA1-240ENST00000523912 IGLV10-54A0A075B6I4 117 aa5.75□□□□□ -1.49
CTNNA1-240ENST00000523912 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.75□□□□□ -1.49
CTNNA1-240ENST00000523912 ZNF727A8MUV8 499 aa5.75□□□□□ -1.49
CTNNA1-240ENST00000523912 C9JQL5 133 aa5.75□□□□□ -1.49
CTNNA1-240ENST00000523912 PRSS1P07477 247 aa5.75□□□□□ -1.49
CTNNA1-240ENST00000523912 SRSF3P84103 164 aaKnown RBP5.75□□□□□ -1.49
CTNNA1-240ENST00000523912 FAM74A3Q4VXF1 159 aa5.75□□□□□ -1.49
CTNNA1-240ENST00000523912 AMMECR1LQ6DCA0 310 aa5.75□□□□□ -1.49
CTNNA1-240ENST00000523912 K7EN84 100 aa5.74□□□□□ -1.49
CTNNA1-240ENST00000523912 NCR2O95944 276 aa5.74□□□□□ -1.49
CTNNA1-240ENST00000523912 APCSP02743 223 aa5.74□□□□□ -1.49
CTNNA1-240ENST00000523912 RPL37AP61513 92 aaKnown RBP5.74□□□□□ -1.49
CTNNA1-240ENST00000523912 CNBPP62633 177 aaKnown RBP5.74□□□□□ -1.49
CTNNA1-240ENST00000523912 CFAP161Q6P656 301 aa5.74□□□□□ -1.49
CTNNA1-240ENST00000523912 UQCC3Q6UW78 93 aa5.74□□□□□ -1.49
CTNNA1-240ENST00000523912 LINC01551Q86U37 167 aa5.74□□□□□ -1.49
CTNNA1-240ENST00000523912 C20orf203Q8NBC4 194 aa5.74□□□□□ -1.49
CTNNA1-240ENST00000523912 RNASE7Q9H1E1 156 aaKnown RBP5.74□□□□□ -1.49
CTNNA1-240ENST00000523912 IGHV3-64A0A075B6Q5 118 aa5.73□□□□□ -1.49
CTNNA1-240ENST00000523912 TRAV26-2A0A0B4J265 109 aa5.73□□□□□ -1.49
CTNNA1-240ENST00000523912 A8MWL6 223 aa5.73□□□□□ -1.49
CTNNA1-240ENST00000523912 GATCO43716 136 aaKnown RBP5.73□□□□□ -1.49
CTNNA1-240ENST00000523912 OXTP01178 125 aa5.73□□□□□ -1.49
CTNNA1-240ENST00000523912 CT83Q5H943 113 aa5.73□□□□□ -1.49
CTNNA1-240ENST00000523912 COMMD7Q86VX2 200 aa5.73□□□□□ -1.49
CTNNA1-240ENST00000523912 C9orf163Q8N9P6 203 aa5.73□□□□□ -1.49
CTNNA1-240ENST00000523912 OCC1Q8TAD7 63 aa5.73□□□□□ -1.49
CTNNA1-240ENST00000523912 NAT8Q9UHE5 227 aa5.73□□□□□ -1.49
CTNNA1-240ENST00000523912 IGLV4-60A0A075B6I1 120 aa5.72□□□□□ -1.49
CTNNA1-240ENST00000523912 H7C423 109 aa5.72□□□□□ -1.49
CTNNA1-240ENST00000523912 RNASEKQ6P5S7 137 aaKnown RBP5.72□□□□□ -1.49
CTNNA1-240ENST00000523912 KRTAP26-1Q6PEX3 210 aa5.72□□□□□ -1.49
CTNNA1-240ENST00000523912 FAM231DQ6ZW35 169 aa5.72□□□□□ -1.49
CTNNA1-240ENST00000523912 GATD1Q8NB37 220 aa5.72□□□□□ -1.49
CTNNA1-240ENST00000523912 BTF3L4Q96K17 158 aa5.72□□□□□ -1.49
CTNNA1-240ENST00000523912 IGKV3OR2-268A0A0C4DH90 116 aa5.71□□□□□ -1.5
CTNNA1-240ENST00000523912 LINC00862A6NCI5 91 aa5.71□□□□□ -1.5
CTNNA1-240ENST00000523912 GAGE12HA6NDE8 117 aa5.71□□□□□ -1.5
CTNNA1-240ENST00000523912 ZNF25P17030 456 aaPredicted RBP5.71□□□□□ -1.5
CTNNA1-240ENST00000523912 RPL23P62829 140 aaKnown RBP5.71□□□□□ -1.5
CTNNA1-240ENST00000523912 ADIRFQ15847 76 aa5.71□□□□□ -1.5
CTNNA1-240ENST00000523912 TMEM241Q24JQ0 296 aa5.71□□□□□ -1.5
CTNNA1-240ENST00000523912 GTSF1Q8WW33 167 aa5.71□□□□□ -1.5
CTNNA1-240ENST00000523912 ISOC2Q96AB3 205 aa5.71□□□□□ -1.5
CTNNA1-240ENST00000523912 DPH3Q96FX2 82 aa5.71□□□□□ -1.5
CTNNA1-240ENST00000523912 TMEM101Q96IK0 257 aa5.71□□□□□ -1.5
CTNNA1-240ENST00000523912 GFRA4Q9GZZ7 299 aa5.71□□□□□ -1.5
CTNNA1-240ENST00000523912 PKIGQ9Y2B9 76 aa5.71□□□□□ -1.5
CTNNA1-240ENST00000523912 SDHAF1A6NFY7 115 aa5.7□□□□□ -1.5
CTNNA1-240ENST00000523912 I3L3M4 83 aa5.7□□□□□ -1.5
CTNNA1-240ENST00000523912 PMCHP20382 165 aa5.7□□□□□ -1.5
CTNNA1-240ENST00000523912 PNRC1Q12796 327 aaPredicted RBP5.7□□□□□ -1.5
CTNNA1-240ENST00000523912 SDIM1Q6ZPB5 146 aa5.7□□□□□ -1.5
CTNNA1-240ENST00000523912 RPL39LQ96EH5 51 aaKnown RBP5.7□□□□□ -1.5
CTNNA1-240ENST00000523912 RNF185Q96GF1 192 aa5.7□□□□□ -1.5
CTNNA1-240ENST00000523912 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.7□□□□□ -1.5
CTNNA1-240ENST00000523912 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.69□□□□□ -1.5
CTNNA1-240ENST00000523912 TRBV6-5A0A0K0K1A5 114 aa5.69□□□□□ -1.5
CTNNA1-240ENST00000523912 A0A1B0GUT8 65 aa5.69□□□□□ -1.5
CTNNA1-240ENST00000523912 IGKV2-29A2NJV5 120 aaPredicted RBP5.69□□□□□ -1.5
CTNNA1-240ENST00000523912 FGF6P10767 208 aa5.69□□□□□ -1.5
CTNNA1-240ENST00000523912 ADCYAP1P18509 176 aa5.69□□□□□ -1.5
CTNNA1-240ENST00000523912 OR5A1Q8NGJ0 315 aa5.69□□□□□ -1.5
CTNNA1-240ENST00000523912 TSKUQ8WUA8 353 aa5.69□□□□□ -1.5
CTNNA1-240ENST00000523912 CHCHD10Q8WYQ3 142 aaPredicted RBP5.69□□□□□ -1.5
CTNNA1-240ENST00000523912 MRAP2Q96G30 205 aa5.69□□□□□ -1.5
CTNNA1-240ENST00000523912 ST20Q9HBF5 79 aa5.69□□□□□ -1.5
CTNNA1-240ENST00000523912 OSTCQ9NRP0 149 aa5.69□□□□□ -1.5
CTNNA1-240ENST00000523912 TMEM218A2RU14 115 aa5.68□□□□□ -1.5
CTNNA1-240ENST00000523912 FAM231BA6NCW3 169 aa5.68□□□□□ -1.5
CTNNA1-240ENST00000523912 HIGD1CA8MV81 97 aa5.68□□□□□ -1.5
CTNNA1-240ENST00000523912 PPP1R17O96001 155 aa5.68□□□□□ -1.5
CTNNA1-240ENST00000523912 RPS10P46783 165 aaKnown RBP5.68□□□□□ -1.5
CTNNA1-240ENST00000523912 FOXA3P55318 350 aaPredicted RBP5.68□□□□□ -1.5
CTNNA1-240ENST00000523912 KRTAP10-4P60372 401 aaPredicted RBP5.68□□□□□ -1.5
CTNNA1-240ENST00000523912 SMAGPQ0VAQ4 97 aa5.68□□□□□ -1.5
CTNNA1-240ENST00000523912 CIRBPQ14011 172 aaKnown RBP5.68□□□□□ -1.5
CTNNA1-240ENST00000523912 C7orf33Q8WU49 177 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms