RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 NTF3P20783 257 aa9.79□□□□□ -0.84
MRPS28-209ENST00000522987 DPH3P1Q9H4G8 78 aa9.79□□□□□ -0.84
MRPS28-209ENST00000522987 NIT2Q9NQR4 276 aa9.79□□□□□ -0.84
MRPS28-209ENST00000522987 TRBV20OR9-2A0A075B6H5 130 aa9.78□□□□□ -0.84
MRPS28-209ENST00000522987 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.78□□□□□ -0.84
MRPS28-209ENST00000522987 A0A1B0GUV1 79 aa9.78□□□□□ -0.84
MRPS28-209ENST00000522987 PHOX2AO14813 284 aa9.78□□□□□ -0.84
MRPS28-209ENST00000522987 TRGC1P0CF51 173 aa9.78□□□□□ -0.84
MRPS28-209ENST00000522987 CIRBPQ14011 172 aaKnown RBP9.78□□□□□ -0.84
MRPS28-209ENST00000522987 COTL1Q14019 142 aa9.78□□□□□ -0.84
MRPS28-209ENST00000522987 WDR73Q6P4I2 378 aa9.78□□□□□ -0.84
MRPS28-209ENST00000522987 C15orf56Q8N910 161 aa9.78□□□□□ -0.84
MRPS28-209ENST00000522987 SPACA4Q8TDM5 124 aa9.78□□□□□ -0.84
MRPS28-209ENST00000522987 MED9Q9NWA0 146 aa9.78□□□□□ -0.84
MRPS28-209ENST00000522987 IGKV2-24A0A0C4DH68 120 aa9.77□□□□□ -0.85
MRPS28-209ENST00000522987 EIF5AP63241 154 aaKnown RBP9.77□□□□□ -0.85
MRPS28-209ENST00000522987 COX6A2Q02221 97 aa9.77□□□□□ -0.85
MRPS28-209ENST00000522987 ODF1Q14990 250 aa9.77□□□□□ -0.85
MRPS28-209ENST00000522987 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.76□□□□□ -0.85
MRPS28-209ENST00000522987 IGKV2-29A2NJV5 120 aaPredicted RBP9.76□□□□□ -0.85
MRPS28-209ENST00000522987 XKRY2A2RUG3 117 aa9.76□□□□□ -0.85
MRPS28-209ENST00000522987 TWIST1Q15672 202 aa9.76□□□□□ -0.85
MRPS28-209ENST00000522987 GATD1Q8NB37 220 aa9.76□□□□□ -0.85
MRPS28-209ENST00000522987 NUDT10Q8NFP7 164 aa9.76□□□□□ -0.85
MRPS28-209ENST00000522987 PRSS3P2Q8NHM4 247 aa9.76□□□□□ -0.85
MRPS28-209ENST00000522987 RPL39LQ96EH5 51 aaKnown RBP9.76□□□□□ -0.85
MRPS28-209ENST00000522987 NUDT11Q96G61 164 aa9.76□□□□□ -0.85
MRPS28-209ENST00000522987 PGLYRP4Q96LB8 373 aa9.76□□□□□ -0.85
MRPS28-209ENST00000522987 F2Z2F3 143 aa9.75□□□□□ -0.85
MRPS28-209ENST00000522987 FOXA3P55318 350 aaPredicted RBP9.75□□□□□ -0.85
MRPS28-209ENST00000522987 MEF2BQ02080 365 aaPredicted RBP9.75□□□□□ -0.85
MRPS28-209ENST00000522987 MAJINQ3KP22 176 aa9.75□□□□□ -0.85
MRPS28-209ENST00000522987 RNASEKQ6P5S7 137 aaKnown RBP9.75□□□□□ -0.85
MRPS28-209ENST00000522987 Q6ZNX1 250 aa9.75□□□□□ -0.85
MRPS28-209ENST00000522987 Q6ZRU5 148 aa9.75□□□□□ -0.85
MRPS28-209ENST00000522987 LYPD6BQ8NI32 183 aa9.75□□□□□ -0.85
MRPS28-209ENST00000522987 TRAV1-1A0A0B4J248 108 aa9.74□□□□□ -0.85
MRPS28-209ENST00000522987 AMMECR1LQ6DCA0 310 aa9.74□□□□□ -0.85
MRPS28-209ENST00000522987 GTSF1Q8WW33 167 aa9.74□□□□□ -0.85
MRPS28-209ENST00000522987 RNASE7Q9H1E1 156 aaKnown RBP9.74□□□□□ -0.85
MRPS28-209ENST00000522987 CTRLP40313 264 aa9.73□□□□□ -0.85
MRPS28-209ENST00000522987 CHCHD10Q8WYQ3 142 aaPredicted RBP9.73□□□□□ -0.85
MRPS28-209ENST00000522987 RNF185Q96GF1 192 aa9.73□□□□□ -0.85
MRPS28-209ENST00000522987 TEX46H3BTG2 121 aa9.72□□□□□ -0.85
MRPS28-209ENST00000522987 PDE6DO43924 150 aa9.72□□□□□ -0.85
MRPS28-209ENST00000522987 BCL2P10415 239 aa9.72□□□□□ -0.85
MRPS28-209ENST00000522987 RPS10P46783 165 aaKnown RBP9.72□□□□□ -0.85
MRPS28-209ENST00000522987 C9orf62Q8N4C0 152 aa9.72□□□□□ -0.85
MRPS28-209ENST00000522987 C7orf33Q8WU49 177 aa9.72□□□□□ -0.85
MRPS28-209ENST00000522987 LINC00526Q96FQ7 95 aa9.72□□□□□ -0.85
MRPS28-209ENST00000522987 PLAC8Q9NZF1 115 aa9.72□□□□□ -0.85
MRPS28-209ENST00000522987 K7EN84 100 aa9.71□□□□□ -0.86
MRPS28-209ENST00000522987 STPG4Q8N801 248 aa9.71□□□□□ -0.86
MRPS28-209ENST00000522987 RPP21Q9H633 154 aaKnown RBP9.71□□□□□ -0.86
MRPS28-209ENST00000522987 A0A096LNI7 61 aa9.7□□□□□ -0.86
MRPS28-209ENST00000522987 APCSP02743 223 aa9.7□□□□□ -0.86
MRPS28-209ENST00000522987 CFAP161Q6P656 301 aa9.7□□□□□ -0.86
MRPS28-209ENST00000522987 SMIM12Q96EX1 92 aa9.7□□□□□ -0.86
MRPS28-209ENST00000522987 NDUFS6O75380 124 aaKnown RBP9.69□□□□□ -0.86
MRPS28-209ENST00000522987 FGF6P10767 208 aa9.69□□□□□ -0.86
MRPS28-209ENST00000522987 XCL1P47992 114 aa9.69□□□□□ -0.86
MRPS28-209ENST00000522987 OCC1Q8TAD7 63 aa9.69□□□□□ -0.86
MRPS28-209ENST00000522987 BIN3Q9NQY0 253 aa9.69□□□□□ -0.86
MRPS28-209ENST00000522987 GAS8-AS1O95177 125 aa9.68□□□□□ -0.86
MRPS28-209ENST00000522987 EIF5AL1Q6IS14 154 aaKnown RBP9.68□□□□□ -0.86
MRPS28-209ENST00000522987 SDHAF1A6NFY7 115 aa9.67□□□□□ -0.86
MRPS28-209ENST00000522987 PRR3P79522 188 aaKnown RBP9.67□□□□□ -0.86
MRPS28-209ENST00000522987 FOXI1Q12951 378 aa9.67□□□□□ -0.86
MRPS28-209ENST00000522987 CNFNQ9BYD5 112 aa9.67□□□□□ -0.86
MRPS28-209ENST00000522987 GVQW2A0A096LPI5 108 aaPredicted RBP9.66□□□□□ -0.86
MRPS28-209ENST00000522987 CCL25O15444 150 aa9.66□□□□□ -0.86
MRPS28-209ENST00000522987 PMCHP20382 165 aa9.66□□□□□ -0.86
MRPS28-209ENST00000522987 SMIM15Q7Z3B0 74 aa9.66□□□□□ -0.86
MRPS28-209ENST00000522987 TMEM242Q9NWH2 141 aa9.66□□□□□ -0.86
MRPS28-209ENST00000522987 FAM231BA6NCW3 169 aa9.65□□□□□ -0.86
MRPS28-209ENST00000522987 GATCO43716 136 aaKnown RBP9.65□□□□□ -0.86
MRPS28-209ENST00000522987 CEBPGP53567 150 aa9.65□□□□□ -0.86
MRPS28-209ENST00000522987 NCR2O95944 276 aa9.64□□□□□ -0.87
MRPS28-209ENST00000522987 OR5A1Q8NGJ0 315 aa9.64□□□□□ -0.87
MRPS28-209ENST00000522987 BTF3L4Q96K17 158 aa9.64□□□□□ -0.87
MRPS28-209ENST00000522987 TNXBP22105 4242 aa9.64□□□□□ -0.87
MRPS28-209ENST00000522987 LINC00959A0A1B0GUT2 108 aa9.63□□□□□ -0.87
MRPS28-209ENST00000522987 TMEM101Q96IK0 257 aa9.63□□□□□ -0.87
MRPS28-209ENST00000522987 CARD19Q96LW7 228 aa9.63□□□□□ -0.87
MRPS28-209ENST00000522987 I3L3M4 83 aa9.62□□□□□ -0.87
MRPS28-209ENST00000522987 TSHBP01222 138 aa9.62□□□□□ -0.87
MRPS28-209ENST00000522987 LINC01600Q96MT4 127 aa9.62□□□□□ -0.87
MRPS28-209ENST00000522987 H7C423 109 aa9.61□□□□□ -0.87
MRPS28-209ENST00000522987 SLC51BQ86UW2 128 aa9.61□□□□□ -0.87
MRPS28-209ENST00000522987 LRP2P98164 4655 aa9.6□□□□□ -0.87
MRPS28-209ENST00000522987 IGHV1-58A0A0C4DH39 117 aa9.6□□□□□ -0.87
MRPS28-209ENST00000522987 SMKR1H3BMG3 65 aa9.6□□□□□ -0.87
MRPS28-209ENST00000522987 ZNF25P17030 456 aaPredicted RBP9.6□□□□□ -0.87
MRPS28-209ENST00000522987 RNASE13Q5GAN3 156 aaKnown RBP9.6□□□□□ -0.87
MRPS28-209ENST00000522987 ST20Q9HBF5 79 aa9.6□□□□□ -0.87
MRPS28-209ENST00000522987 A8MWL6 223 aa9.59□□□□□ -0.87
MRPS28-209ENST00000522987 ESDP10768 282 aa9.59□□□□□ -0.87
MRPS28-209ENST00000522987 GAGE2BQ13066 116 aa9.59□□□□□ -0.87
MRPS28-209ENST00000522987 SS18Q15532 418 aa9.59□□□□□ -0.87
MRPS28-209ENST00000522987 TEX261Q6UWH6 196 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms