RNA–Protein interactions for RNA: ENST00000522139.1

CNOT8-220, Transcript of CCR4-NOT transcription complex subunit 8, humanhuman

TSL 3

Gene CNOT8, Length 566 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT8-220ENST00000522139 IGHV3-72A0A0B4J1Y9 119 aa3.47□□□□□ -1.85
CNOT8-220ENST00000522139 TRAV40A0A0B4J280 105 aa3.47□□□□□ -1.85
CNOT8-220ENST00000522139 LOC389332A0A1B0GUA5 103 aa3.47□□□□□ -1.85
CNOT8-220ENST00000522139 SDHAF1A6NFY7 115 aa3.47□□□□□ -1.85
CNOT8-220ENST00000522139 IGIPA6NJ69 53 aa3.47□□□□□ -1.85
CNOT8-220ENST00000522139 C11orf86A6NJI1 115 aa3.47□□□□□ -1.85
CNOT8-220ENST00000522139 IGKV2D-40P01614 121 aaPredicted RBP3.47□□□□□ -1.85
CNOT8-220ENST00000522139 CHTF8P0CG12 524 aa3.47□□□□□ -1.85
CNOT8-220ENST00000522139 P0DMU3 169 aa3.47□□□□□ -1.85
CNOT8-220ENST00000522139 FAM231AP0DMU4 169 aa3.47□□□□□ -1.85
CNOT8-220ENST00000522139 FAM231CP0DMU5 169 aa3.47□□□□□ -1.85
CNOT8-220ENST00000522139 LINC00315P59091 139 aa3.47□□□□□ -1.85
CNOT8-220ENST00000522139 SMAGPQ0VAQ4 97 aa3.47□□□□□ -1.85
CNOT8-220ENST00000522139 RHOHQ15669 191 aa3.47□□□□□ -1.85
CNOT8-220ENST00000522139 MORN3Q6PF18 240 aaPredicted RBP3.47□□□□□ -1.85
CNOT8-220ENST00000522139 TEN1Q86WV5 123 aa3.47□□□□□ -1.85
CNOT8-220ENST00000522139 GPHB5Q86YW7 130 aa3.47□□□□□ -1.85
CNOT8-220ENST00000522139 DEFB123Q8N688 67 aa3.47□□□□□ -1.85
CNOT8-220ENST00000522139 ZFAND2AQ8N6M9 145 aa3.47□□□□□ -1.85
CNOT8-220ENST00000522139 DEFB124Q8NES8 71 aa3.47□□□□□ -1.85
CNOT8-220ENST00000522139 FOXC2Q99958 501 aa3.47□□□□□ -1.85
CNOT8-220ENST00000522139 MRPL16Q9NX20 251 aaKnown RBP3.47□□□□□ -1.85
CNOT8-220ENST00000522139 CELA1Q9UNI1 258 aa3.47□□□□□ -1.85
CNOT8-220ENST00000522139 CYSLTR1Q9Y271 337 aa3.47□□□□□ -1.85
CNOT8-220ENST00000522139 TLN1Q9Y490 2541 aaKnown RBP3.47□□□□□ -1.85
CNOT8-220ENST00000522139 LOC400499M0QZD8 3231 aa3.47□□□□□ -1.85
CNOT8-220ENST00000522139 CELSR3Q9NYQ7 3312 aa3.47□□□□□ -1.85
CNOT8-220ENST00000522139 WDFY4Q6ZS81 3184 aa3.47□□□□□ -1.85
CNOT8-220ENST00000522139 MUC3AQ02505 3323 aa3.46□□□□□ -1.86
CNOT8-220ENST00000522139 A0A0B4J2C4 111 aa3.46□□□□□ -1.86
CNOT8-220ENST00000522139 LGALS9O00182 355 aa3.46□□□□□ -1.86
CNOT8-220ENST00000522139 AZU1P20160 251 aa3.46□□□□□ -1.86
CNOT8-220ENST00000522139 HLA-DMBP28068 263 aa3.46□□□□□ -1.86
CNOT8-220ENST00000522139 HERVK_113P61574 105 aa3.46□□□□□ -1.86
CNOT8-220ENST00000522139 DAZ2Q13117 558 aaKnown RBP3.46□□□□□ -1.86
CNOT8-220ENST00000522139 TMEM61Q8N0U2 210 aa3.46□□□□□ -1.86
CNOT8-220ENST00000522139 ZNF418Q8TF45 676 aaPredicted RBP3.46□□□□□ -1.86
CNOT8-220ENST00000522139 PPDPFLQ8WWR9 84 aa3.46□□□□□ -1.86
CNOT8-220ENST00000522139 DAZ3Q9NR90 486 aaKnown RBP3.46□□□□□ -1.86
CNOT8-220ENST00000522139 NHP2Q9NX24 153 aaKnown RBP3.46□□□□□ -1.86
CNOT8-220ENST00000522139 CSDC2Q9Y534 153 aaKnown RBP3.46□□□□□ -1.86
CNOT8-220ENST00000522139 EP300Q09472 2414 aaPredicted RBP3.46□□□□□ -1.86
CNOT8-220ENST00000522139 APC2O95996 2303 aa3.45□□□□□ -1.86
CNOT8-220ENST00000522139 KALRNO60229 2985 aa3.45□□□□□ -1.86
CNOT8-220ENST00000522139 TTC28Q96AY4 2481 aa3.45□□□□□ -1.86
CNOT8-220ENST00000522139 A0A0J9YY99 117 aa3.45□□□□□ -1.86
CNOT8-220ENST00000522139 FAM240AA0A1B0GVK7 77 aa3.45□□□□□ -1.86
CNOT8-220ENST00000522139 A8MTW9 85 aa3.45□□□□□ -1.86
CNOT8-220ENST00000522139 ZNF861PO60384 105 aa3.45□□□□□ -1.86
CNOT8-220ENST00000522139 TSPAN13O95857 204 aa3.45□□□□□ -1.86
CNOT8-220ENST00000522139 CRYGDP07320 174 aa3.45□□□□□ -1.86
CNOT8-220ENST00000522139 LGALS1P09382 135 aaKnown RBP3.45□□□□□ -1.86
CNOT8-220ENST00000522139 RNASE4P34096 147 aaKnown RBP3.45□□□□□ -1.86
CNOT8-220ENST00000522139 NBL1P41271 181 aa3.45□□□□□ -1.86
CNOT8-220ENST00000522139 UQCRFS1P47985 274 aa3.45□□□□□ -1.86
CNOT8-220ENST00000522139 UCNP55089 124 aa3.45□□□□□ -1.86
CNOT8-220ENST00000522139 KRTAP10-3P60369 221 aa3.45□□□□□ -1.86
CNOT8-220ENST00000522139 PMVKQ15126 192 aa3.45□□□□□ -1.86
CNOT8-220ENST00000522139 SPANXN1Q5VSR9 72 aa3.45□□□□□ -1.86
CNOT8-220ENST00000522139 NDUFA11Q86Y39 141 aa3.45□□□□□ -1.86
CNOT8-220ENST00000522139 C10orf126Q8N4M7 172 aa3.45□□□□□ -1.86
CNOT8-220ENST00000522139 BAALCQ8WXS3 180 aa3.45□□□□□ -1.86
CNOT8-220ENST00000522139 SCGB3A1Q96QR1 104 aa3.45□□□□□ -1.86
CNOT8-220ENST00000522139 AMELXQ99217 191 aa3.45□□□□□ -1.86
CNOT8-220ENST00000522139 SPANXCQ9NY87 97 aa3.45□□□□□ -1.86
CNOT8-220ENST00000522139 ABCA4P78363 2273 aa3.45□□□□□ -1.86
CNOT8-220ENST00000522139 ADGRG4Q8IZF6 3080 aa3.44□□□□□ -1.86
CNOT8-220ENST00000522139 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.44□□□□□ -1.86
CNOT8-220ENST00000522139 IGHV3-21A0A0B4J1V1 117 aa3.44□□□□□ -1.86
CNOT8-220ENST00000522139 TRAV26-2A0A0B4J265 109 aa3.44□□□□□ -1.86
CNOT8-220ENST00000522139 TRBV30A0A0K0K1B3 111 aa3.44□□□□□ -1.86
CNOT8-220ENST00000522139 SPAARA0A1B0GVQ0 90 aa3.44□□□□□ -1.86
CNOT8-220ENST00000522139 SMKR1H3BMG3 65 aa3.44□□□□□ -1.86
CNOT8-220ENST00000522139 PANO1I0J062 215 aa3.44□□□□□ -1.86
CNOT8-220ENST00000522139 TIMM17BO60830 172 aa3.44□□□□□ -1.86
CNOT8-220ENST00000522139 IGHV3-30P01768 117 aa3.44□□□□□ -1.86
CNOT8-220ENST00000522139 IGHG2P01859 326 aa3.44□□□□□ -1.86
CNOT8-220ENST00000522139 IGHV3-30-5P0DP03 117 aa3.44□□□□□ -1.86
CNOT8-220ENST00000522139 ATP5G2Q06055 141 aa3.44□□□□□ -1.86
CNOT8-220ENST00000522139 WFDC2Q14508 124 aa3.44□□□□□ -1.86
CNOT8-220ENST00000522139 DEFB121Q5J5C9 76 aa3.44□□□□□ -1.86
CNOT8-220ENST00000522139 C5orf56Q8N8D9 126 aa3.44□□□□□ -1.86
CNOT8-220ENST00000522139 OR10J6PQ8NGY7 276 aa3.44□□□□□ -1.86
CNOT8-220ENST00000522139 C18orf15Q96N68 181 aa3.44□□□□□ -1.86
CNOT8-220ENST00000522139 LINC00467Q9BRT7 94 aa3.44□□□□□ -1.86
CNOT8-220ENST00000522139 PRADC1Q9BSG0 188 aa3.44□□□□□ -1.86
CNOT8-220ENST00000522139 PRORYQ9H606 182 aa3.44□□□□□ -1.86
CNOT8-220ENST00000522139 HILPDAQ9Y5L2 63 aa3.44□□□□□ -1.86
CNOT8-220ENST00000522139 TACC2O95359 2948 aa3.43□□□□□ -1.86
CNOT8-220ENST00000522139 IGLV4-69A0A075B6H9 119 aa3.43□□□□□ -1.86
CNOT8-220ENST00000522139 TMSB15BA0A087X1C1 80 aa3.43□□□□□ -1.86
CNOT8-220ENST00000522139 TRAV2A0A0B4J234 112 aa3.43□□□□□ -1.86
CNOT8-220ENST00000522139 CCL21O00585 134 aa3.43□□□□□ -1.86
CNOT8-220ENST00000522139 APOMO95445 188 aa3.43□□□□□ -1.86
CNOT8-220ENST00000522139 INSP01308 110 aa3.43□□□□□ -1.86
CNOT8-220ENST00000522139 TRGV3P03979 118 aa3.43□□□□□ -1.86
CNOT8-220ENST00000522139 RNASE3P12724 160 aaKnown RBP3.43□□□□□ -1.86
CNOT8-220ENST00000522139 EFNA4P52798 201 aa3.43□□□□□ -1.86
CNOT8-220ENST00000522139 KIAA0087Q14695 138 aa3.43□□□□□ -1.86
CNOT8-220ENST00000522139 ETDBQ3ZM63 59 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms