RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 MYCBP2O75592 4640 aa11.13□□□□□ -0.63
SQLE-205ENST00000521232 TRAV26-2A0A0B4J265 109 aa11.12□□□□□ -0.63
SQLE-205ENST00000521232 SRP19P09132 144 aaKnown RBP11.12□□□□□ -0.63
SQLE-205ENST00000521232 COTL1Q14019 142 aa11.12□□□□□ -0.63
SQLE-205ENST00000521232 LINC01551Q86U37 167 aa11.12□□□□□ -0.63
SQLE-205ENST00000521232 C20orf203Q8NBC4 194 aa11.12□□□□□ -0.63
SQLE-205ENST00000521232 HERC1Q15751 4861 aa11.11□□□□□ -0.63
SQLE-205ENST00000521232 ZNF727A8MUV8 499 aa11.11□□□□□ -0.63
SQLE-205ENST00000521232 REG3AQ06141 175 aa11.11□□□□□ -0.63
SQLE-205ENST00000521232 CLPSL2Q6UWE3 100 aa11.11□□□□□ -0.63
SQLE-205ENST00000521232 TEX261Q6UWH6 196 aa11.11□□□□□ -0.63
SQLE-205ENST00000521232 DEFB104AQ8WTQ1 72 aa11.11□□□□□ -0.63
SQLE-205ENST00000521232 IGLV4-60A0A075B6I1 120 aa11.1□□□□□ -0.63
SQLE-205ENST00000521232 USP17L23D6RBM5 183 aa11.1□□□□□ -0.63
SQLE-205ENST00000521232 HLA-DQA1P01909 254 aa11.1□□□□□ -0.63
SQLE-205ENST00000521232 OSTCQ9NRP0 149 aa11.1□□□□□ -0.63
SQLE-205ENST00000521232 FLG2Q5D862 2391 aaPredicted RBP11.09□□□□□ -0.63
SQLE-205ENST00000521232 TRAV8-4A0A0B4J246 113 aa11.09□□□□□ -0.63
SQLE-205ENST00000521232 FAM231BA6NCW3 169 aa11.09□□□□□ -0.63
SQLE-205ENST00000521232 AMTP48728 403 aa11.09□□□□□ -0.63
SQLE-205ENST00000521232 TSKUQ8WUA8 353 aa11.09□□□□□ -0.63
SQLE-205ENST00000521232 RPL39LQ96EH5 51 aaKnown RBP11.09□□□□□ -0.63
SQLE-205ENST00000521232 GFRA4Q9GZZ7 299 aa11.09□□□□□ -0.63
SQLE-205ENST00000521232 UBE2L6O14933 153 aa11.08□□□□□ -0.64
SQLE-205ENST00000521232 PRSS1P07477 247 aa11.08□□□□□ -0.64
SQLE-205ENST00000521232 DGAT2L7PQ6IED9 249 aa11.08□□□□□ -0.64
SQLE-205ENST00000521232 HIGD1CA8MV81 97 aa11.07□□□□□ -0.64
SQLE-205ENST00000521232 NCR2O95944 276 aa11.07□□□□□ -0.64
SQLE-205ENST00000521232 BORCS7Q96B45 105 aa11.07□□□□□ -0.64
SQLE-205ENST00000521232 CHAC1Q9BUX1 264 aa11.07□□□□□ -0.64
SQLE-205ENST00000521232 IGLV10-54A0A075B6I4 117 aa11.06□□□□□ -0.64
SQLE-205ENST00000521232 TRBV6-5A0A0K0K1A5 114 aa11.06□□□□□ -0.64
SQLE-205ENST00000521232 A0A1B0GUT8 65 aa11.06□□□□□ -0.64
SQLE-205ENST00000521232 FAM74A3Q4VXF1 159 aa11.06□□□□□ -0.64
SQLE-205ENST00000521232 SCXQ7RTU7 201 aa11.06□□□□□ -0.64
SQLE-205ENST00000521232 TMEM191AQ9H0A3 160 aa11.06□□□□□ -0.64
SQLE-205ENST00000521232 DMBT1Q9UGM3 2413 aaPredicted RBP11.06□□□□□ -0.64
SQLE-205ENST00000521232 SDHAF1A6NFY7 115 aa11.05□□□□□ -0.64
SQLE-205ENST00000521232 TMEM241Q24JQ0 296 aa11.05□□□□□ -0.64
SQLE-205ENST00000521232 CLRN3Q8NCR9 226 aa11.05□□□□□ -0.64
SQLE-205ENST00000521232 V9GYV3 84 aa11.05□□□□□ -0.64
SQLE-205ENST00000521232 H7C423 109 aa11.04□□□□□ -0.64
SQLE-205ENST00000521232 LINC00528Q8N1L1 170 aa11.04□□□□□ -0.64
SQLE-205ENST00000521232 C9orf163Q8N9P6 203 aa11.04□□□□□ -0.64
SQLE-205ENST00000521232 ISOC2Q96AB3 205 aa11.04□□□□□ -0.64
SQLE-205ENST00000521232 C9JQL5 133 aa11.03□□□□□ -0.64
SQLE-205ENST00000521232 I3L3M4 83 aa11.03□□□□□ -0.64
SQLE-205ENST00000521232 GAS8-AS1O95177 125 aa11.03□□□□□ -0.64
SQLE-205ENST00000521232 PLA2G1BP04054 148 aaKnown RBP11.03□□□□□ -0.64
SQLE-205ENST00000521232 RPL23P62829 140 aaKnown RBP11.03□□□□□ -0.64
SQLE-205ENST00000521232 CIRBP-AS1Q8TBR5 109 aa11.03□□□□□ -0.64
SQLE-205ENST00000521232 RNF185Q96GF1 192 aa11.03□□□□□ -0.64
SQLE-205ENST00000521232 APCSP02743 223 aa11.02□□□□□ -0.65
SQLE-205ENST00000521232 RAB4AP20338 218 aa11.02□□□□□ -0.65
SQLE-205ENST00000521232 PMCHP20382 165 aa11.02□□□□□ -0.65
SQLE-205ENST00000521232 NUP35Q8NFH5 326 aa11.02□□□□□ -0.65
SQLE-205ENST00000521232 SMDT1Q9H4I9 107 aa11.02□□□□□ -0.65
SQLE-205ENST00000521232 SRSF3P84103 164 aaKnown RBP11.01□□□□□ -0.65
SQLE-205ENST00000521232 PEA15Q15121 130 aa11.01□□□□□ -0.65
SQLE-205ENST00000521232 AMMECR1LQ6DCA0 310 aa11.01□□□□□ -0.65
SQLE-205ENST00000521232 ST20Q9HBF5 79 aa11.01□□□□□ -0.65
SQLE-205ENST00000521232 NAT8Q9UHE5 227 aa11.01□□□□□ -0.65
SQLE-205ENST00000521232 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11□□□□□ -0.65
SQLE-205ENST00000521232 IGKV2-29A2NJV5 120 aaPredicted RBP11□□□□□ -0.65
SQLE-205ENST00000521232 POLR2KP53803 58 aaKnown RBP11□□□□□ -0.65
SQLE-205ENST00000521232 CNBPP62633 177 aaKnown RBP11□□□□□ -0.65
SQLE-205ENST00000521232 RIGQ13278 110 aa11□□□□□ -0.65
SQLE-205ENST00000521232 MRAP2Q96G30 205 aa11□□□□□ -0.65
SQLE-205ENST00000521232 FGF6P10767 208 aa10.99□□□□□ -0.65
SQLE-205ENST00000521232 ESDP10768 282 aa10.99□□□□□ -0.65
SQLE-205ENST00000521232 RNASEKQ6P5S7 137 aaKnown RBP10.99□□□□□ -0.65
SQLE-205ENST00000521232 AMN1Q8IY45 258 aa10.99□□□□□ -0.65
SQLE-205ENST00000521232 NAT8BQ9UHF3 227 aa10.99□□□□□ -0.65
SQLE-205ENST00000521232 TRBV27A0A0K0K1C4 114 aa10.98□□□□□ -0.65
SQLE-205ENST00000521232 hDV102S1A0JD36 115 aa10.98□□□□□ -0.65
SQLE-205ENST00000521232 TSHBP01222 138 aa10.98□□□□□ -0.65
SQLE-205ENST00000521232 ZNF25P17030 456 aaPredicted RBP10.98□□□□□ -0.65
SQLE-205ENST00000521232 RPS10P46783 165 aaKnown RBP10.98□□□□□ -0.65
SQLE-205ENST00000521232 ADIRFQ15847 76 aa10.98□□□□□ -0.65
SQLE-205ENST00000521232 SDIM1Q6ZPB5 146 aa10.98□□□□□ -0.65
SQLE-205ENST00000521232 SMIM27A0A1W2PRY6 76 aa10.97□□□□□ -0.65
SQLE-205ENST00000521232 GAGE12HA6NDE8 117 aa10.97□□□□□ -0.65
SQLE-205ENST00000521232 SLPIP03973 132 aa10.97□□□□□ -0.65
SQLE-205ENST00000521232 IGKV3OR2-268A0A0C4DH90 116 aa10.96□□□□□ -0.65
SQLE-205ENST00000521232 CFAP161Q6P656 301 aa10.96□□□□□ -0.65
SQLE-205ENST00000521232 CHCHD10Q8WYQ3 142 aaPredicted RBP10.96□□□□□ -0.65
SQLE-205ENST00000521232 AP5S1Q9NUS5 200 aa10.96□□□□□ -0.65
SQLE-205ENST00000521232 TMEM242Q9NWH2 141 aa10.96□□□□□ -0.65
SQLE-205ENST00000521232 VCYO14598 125 aa10.95□□□□□ -0.66
SQLE-205ENST00000521232 PPP1R17O96001 155 aa10.95□□□□□ -0.66
SQLE-205ENST00000521232 KRTAP10-4P60372 401 aaPredicted RBP10.95□□□□□ -0.66
SQLE-205ENST00000521232 OR5A1Q8NGJ0 315 aa10.95□□□□□ -0.66
SQLE-205ENST00000521232 TMEM101Q96IK0 257 aa10.95□□□□□ -0.66
SQLE-205ENST00000521232 BTF3L4Q96K17 158 aa10.95□□□□□ -0.66
SQLE-205ENST00000521232 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.94□□□□□ -0.66
SQLE-205ENST00000521232 SMKR1H3BMG3 65 aa10.94□□□□□ -0.66
SQLE-205ENST00000521232 FAM104BQ5XKR9 115 aa10.94□□□□□ -0.66
SQLE-205ENST00000521232 C15orf56Q8N910 161 aa10.94□□□□□ -0.66
SQLE-205ENST00000521232 NRACQ8N912 160 aa10.94□□□□□ -0.66
SQLE-205ENST00000521232 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms