RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 A0A1B0GUV1 79 aa6.98□□□□□ -1.29
PVT1-209ENST00000520913 AMTP48728 403 aa6.98□□□□□ -1.29
PVT1-209ENST00000520913 KRTAP26-1Q6PEX3 210 aa6.98□□□□□ -1.29
PVT1-209ENST00000520913 C20orf203Q8NBC4 194 aa6.98□□□□□ -1.29
PVT1-209ENST00000520913 OCC1Q8TAD7 63 aa6.98□□□□□ -1.29
PVT1-209ENST00000520913 IGLV10-54A0A075B6I4 117 aa6.97□□□□□ -1.29
PVT1-209ENST00000520913 TRAV8-4A0A0B4J246 113 aa6.97□□□□□ -1.29
PVT1-209ENST00000520913 GATCO43716 136 aaKnown RBP6.97□□□□□ -1.29
PVT1-209ENST00000520913 PRSS1P07477 247 aa6.97□□□□□ -1.29
PVT1-209ENST00000520913 DGAT2L7PQ6IED9 249 aa6.97□□□□□ -1.29
PVT1-209ENST00000520913 FAM231DQ6ZW35 169 aa6.97□□□□□ -1.29
PVT1-209ENST00000520913 GATD1Q8NB37 220 aa6.97□□□□□ -1.29
PVT1-209ENST00000520913 LYPD6BQ8NI32 183 aa6.97□□□□□ -1.29
PVT1-209ENST00000520913 CIRBP-AS1Q8TBR5 109 aa6.97□□□□□ -1.29
PVT1-209ENST00000520913 IGLV4-60A0A075B6I1 120 aa6.96□□□□□ -1.3
PVT1-209ENST00000520913 TRAV26-2A0A0B4J265 109 aa6.96□□□□□ -1.3
PVT1-209ENST00000520913 A8MWL6 223 aa6.96□□□□□ -1.3
PVT1-209ENST00000520913 CEBPGP53567 150 aa6.96□□□□□ -1.3
PVT1-209ENST00000520913 CT83Q5H943 113 aa6.96□□□□□ -1.3
PVT1-209ENST00000520913 TEX261Q6UWH6 196 aa6.96□□□□□ -1.3
PVT1-209ENST00000520913 CLRN3Q8NCR9 226 aa6.96□□□□□ -1.3
PVT1-209ENST00000520913 GTSF1Q8WW33 167 aa6.96□□□□□ -1.3
PVT1-209ENST00000520913 NDUFS6O75380 124 aaKnown RBP6.95□□□□□ -1.3
PVT1-209ENST00000520913 NCR2O95944 276 aa6.95□□□□□ -1.3
PVT1-209ENST00000520913 C9orf163Q8N9P6 203 aa6.95□□□□□ -1.3
PVT1-209ENST00000520913 DEFB104AQ8WTQ1 72 aa6.95□□□□□ -1.3
PVT1-209ENST00000520913 BORCS7Q96B45 105 aa6.95□□□□□ -1.3
PVT1-209ENST00000520913 SMIM7Q9BQ49 75 aa6.95□□□□□ -1.3
PVT1-209ENST00000520913 LOC100996750A0A140TA64 210 aa6.94□□□□□ -1.3
PVT1-209ENST00000520913 APCSP02743 223 aa6.94□□□□□ -1.3
PVT1-209ENST00000520913 RPL39LQ96EH5 51 aaKnown RBP6.94□□□□□ -1.3
PVT1-209ENST00000520913 FAM210AQ96ND0 272 aa6.94□□□□□ -1.3
PVT1-209ENST00000520913 KRTAP4-6Q9BYQ5 205 aa6.94□□□□□ -1.3
PVT1-209ENST00000520913 EIF5A2Q9GZV4 153 aaKnown RBP6.94□□□□□ -1.3
PVT1-209ENST00000520913 GFRA4Q9GZZ7 299 aa6.94□□□□□ -1.3
PVT1-209ENST00000520913 LRP1Q07954 4544 aaKnown RBP6.94□□□□□ -1.3
PVT1-209ENST00000520913 hDV102S1A0JD36 115 aa6.93□□□□□ -1.3
PVT1-209ENST00000520913 SDHAF1A6NFY7 115 aa6.93□□□□□ -1.3
PVT1-209ENST00000520913 J3QL48 77 aa6.93□□□□□ -1.3
PVT1-209ENST00000520913 CNBPP62633 177 aaKnown RBP6.93□□□□□ -1.3
PVT1-209ENST00000520913 AMMECR1LQ6DCA0 310 aa6.93□□□□□ -1.3
PVT1-209ENST00000520913 LINC01551Q86U37 167 aa6.93□□□□□ -1.3
PVT1-209ENST00000520913 AP5S1Q9NUS5 200 aa6.93□□□□□ -1.3
PVT1-209ENST00000520913 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.92□□□□□ -1.3
PVT1-209ENST00000520913 ZNF727A8MUV8 499 aa6.92□□□□□ -1.3
PVT1-209ENST00000520913 H7C423 109 aa6.92□□□□□ -1.3
PVT1-209ENST00000520913 FOXA3P55318 350 aaPredicted RBP6.92□□□□□ -1.3
PVT1-209ENST00000520913 KRTAP10-4P60372 401 aaPredicted RBP6.92□□□□□ -1.3
PVT1-209ENST00000520913 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.91□□□□□ -1.3
PVT1-209ENST00000520913 IGKV3OR2-268A0A0C4DH90 116 aa6.91□□□□□ -1.3
PVT1-209ENST00000520913 TRBV6-5A0A0K0K1A5 114 aa6.91□□□□□ -1.3
PVT1-209ENST00000520913 A0A1B0GUT8 65 aa6.91□□□□□ -1.3
PVT1-209ENST00000520913 IGKV2-29A2NJV5 120 aaPredicted RBP6.91□□□□□ -1.3
PVT1-209ENST00000520913 FAM231BA6NCW3 169 aa6.91□□□□□ -1.3
PVT1-209ENST00000520913 HIGD1CA8MV81 97 aa6.91□□□□□ -1.3
PVT1-209ENST00000520913 KRTAP29-1A8MX34 341 aaPredicted RBP6.91□□□□□ -1.3
PVT1-209ENST00000520913 ZNF25P17030 456 aaPredicted RBP6.91□□□□□ -1.3
PVT1-209ENST00000520913 RNASEKQ6P5S7 137 aaKnown RBP6.91□□□□□ -1.3
PVT1-209ENST00000520913 TSKUQ8WUA8 353 aa6.91□□□□□ -1.3
PVT1-209ENST00000520913 IGHV3-64A0A075B6Q5 118 aa6.9□□□□□ -1.3
PVT1-209ENST00000520913 GAGE12HA6NDE8 117 aa6.9□□□□□ -1.3
PVT1-209ENST00000520913 I3L3M4 83 aa6.9□□□□□ -1.3
PVT1-209ENST00000520913 SRP19P09132 144 aaKnown RBP6.9□□□□□ -1.3
PVT1-209ENST00000520913 PMCHP20382 165 aa6.9□□□□□ -1.3
PVT1-209ENST00000520913 RPL37AP61513 92 aaKnown RBP6.9□□□□□ -1.3
PVT1-209ENST00000520913 TMEM191AQ9H0A3 160 aa6.9□□□□□ -1.3
PVT1-209ENST00000520913 OSTCQ9NRP0 149 aa6.9□□□□□ -1.3
PVT1-209ENST00000520913 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.9□□□□□ -1.3
PVT1-209ENST00000520913 FGF6P10767 208 aa6.89□□□□□ -1.31
PVT1-209ENST00000520913 CIRBPQ14011 172 aaKnown RBP6.89□□□□□ -1.31
PVT1-209ENST00000520913 CFAP161Q6P656 301 aa6.89□□□□□ -1.31
PVT1-209ENST00000520913 SDIM1Q6ZPB5 146 aa6.89□□□□□ -1.31
PVT1-209ENST00000520913 C15orf56Q8N910 161 aa6.89□□□□□ -1.31
PVT1-209ENST00000520913 MRAP2Q96G30 205 aa6.89□□□□□ -1.31
PVT1-209ENST00000520913 TMEM101Q96IK0 257 aa6.89□□□□□ -1.31
PVT1-209ENST00000520913 BTF3L4Q96K17 158 aa6.89□□□□□ -1.31
PVT1-209ENST00000520913 ST20Q9HBF5 79 aa6.89□□□□□ -1.31
PVT1-209ENST00000520913 PANO1I0J062 215 aa6.88□□□□□ -1.31
PVT1-209ENST00000520913 FAM74A3Q4VXF1 159 aa6.88□□□□□ -1.31
PVT1-209ENST00000520913 OR5A1Q8NGJ0 315 aa6.88□□□□□ -1.31
PVT1-209ENST00000520913 CHCHD10Q8WYQ3 142 aaPredicted RBP6.88□□□□□ -1.31
PVT1-209ENST00000520913 RNF185Q96GF1 192 aa6.88□□□□□ -1.31
PVT1-209ENST00000520913 TMEM242Q9NWH2 141 aa6.88□□□□□ -1.31
PVT1-209ENST00000520913 V9GYV3 84 aa6.88□□□□□ -1.31
PVT1-209ENST00000520913 TSHBP01222 138 aa6.87□□□□□ -1.31
PVT1-209ENST00000520913 ESDP10768 282 aa6.87□□□□□ -1.31
PVT1-209ENST00000520913 RIGQ13278 110 aa6.87□□□□□ -1.31
PVT1-209ENST00000520913 AMN1Q8IY45 258 aa6.87□□□□□ -1.31
PVT1-209ENST00000520913 ISOC2Q96AB3 205 aa6.87□□□□□ -1.31
PVT1-209ENST00000520913 GVQW2A0A096LPI5 108 aaPredicted RBP6.86□□□□□ -1.31
PVT1-209ENST00000520913 TRBV27A0A0K0K1C4 114 aa6.86□□□□□ -1.31
PVT1-209ENST00000520913 C7orf77A4D0Y5 90 aa6.86□□□□□ -1.31
PVT1-209ENST00000520913 GAS8-AS1O95177 125 aa6.86□□□□□ -1.31
PVT1-209ENST00000520913 OXTP01178 125 aa6.86□□□□□ -1.31
PVT1-209ENST00000520913 SLPIP03973 132 aa6.86□□□□□ -1.31
PVT1-209ENST00000520913 RAB4AP20338 218 aa6.86□□□□□ -1.31
PVT1-209ENST00000520913 RPS10P46783 165 aaKnown RBP6.86□□□□□ -1.31
PVT1-209ENST00000520913 RPL23P62829 140 aaKnown RBP6.86□□□□□ -1.31
PVT1-209ENST00000520913 ADIRFQ15847 76 aa6.86□□□□□ -1.31
PVT1-209ENST00000520913 TMEM241Q24JQ0 296 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms