RNA–Protein interactions for RNA: ENST00000519770.1

IGHV3-52-201, Transcript of immunoglobulin heavy variable 3-52 (pseudogene), humanhuman

BASIC

Gene IGHV3-52, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-52-201ENST00000519770 TMA7Q9Y2S6 64 aaKnown RBP12.22□□□□□ -0.45
IGHV3-52-201ENST00000519770 IGHV1-24A0A0C4DH33 117 aa12.21□□□□□ -0.45
IGHV3-52-201ENST00000519770 SMAGPQ0VAQ4 97 aa12.21□□□□□ -0.45
IGHV3-52-201ENST00000519770 IGLV2-18A0A075B6J9 118 aa12.2□□□□□ -0.46
IGHV3-52-201ENST00000519770 UBE2L6O14933 153 aa12.2□□□□□ -0.46
IGHV3-52-201ENST00000519770 SERF1AO75920 110 aa12.2□□□□□ -0.46
IGHV3-52-201ENST00000519770 TSHBP01222 138 aa12.2□□□□□ -0.46
IGHV3-52-201ENST00000519770 CCL18P55774 89 aa12.2□□□□□ -0.46
IGHV3-52-201ENST00000519770 ZFAND6Q6FIF0 208 aa12.2□□□□□ -0.46
IGHV3-52-201ENST00000519770 DEFB104AQ8WTQ1 72 aa12.2□□□□□ -0.46
IGHV3-52-201ENST00000519770 FBN3Q75N90 2809 aa12.19□□□□□ -0.46
IGHV3-52-201ENST00000519770 TRBV6-8A0A0A6YYG3 113 aa12.19□□□□□ -0.46
IGHV3-52-201ENST00000519770 TRAV8-6A0A0B4J262 113 aa12.19□□□□□ -0.46
IGHV3-52-201ENST00000519770 TIRAPP58753 221 aa12.19□□□□□ -0.46
IGHV3-52-201ENST00000519770 TMEM243Q9BU79 118 aa12.19□□□□□ -0.46
IGHV3-52-201ENST00000519770 LINC01549A6NIU2 74 aa12.18□□□□□ -0.46
IGHV3-52-201ENST00000519770 BTF3P20290 206 aaKnown RBP12.18□□□□□ -0.46
IGHV3-52-201ENST00000519770 PKIAP61925 76 aa12.18□□□□□ -0.46
IGHV3-52-201ENST00000519770 LYPD5Q6UWN5 251 aa12.18□□□□□ -0.46
IGHV3-52-201ENST00000519770 CHCHD5Q9BSY4 110 aa12.18□□□□□ -0.46
IGHV3-52-201ENST00000519770 PRKDCP78527 4128 aaKnown RBP12.17□□□□□ -0.46
IGHV3-52-201ENST00000519770 LINC01546A6NGU7 62 aa12.17□□□□□ -0.46
IGHV3-52-201ENST00000519770 COA6Q5JTJ3 125 aaKnown RBP12.17□□□□□ -0.46
IGHV3-52-201ENST00000519770 LELP1Q5T871 98 aa12.17□□□□□ -0.46
IGHV3-52-201ENST00000519770 STAB2Q8WWQ8 2551 aa12.16□□□□□ -0.46
IGHV3-52-201ENST00000519770 HBDP02042 147 aa12.16□□□□□ -0.46
IGHV3-52-201ENST00000519770 S100A2P29034 98 aa12.16□□□□□ -0.46
IGHV3-52-201ENST00000519770 CYSLTR1Q9Y271 337 aa12.16□□□□□ -0.46
IGHV3-52-201ENST00000519770 COL7A1Q02388 2944 aa12.16□□□□□ -0.46
IGHV3-52-201ENST00000519770 TMEM262E9PQX1 116 aa12.15□□□□□ -0.46
IGHV3-52-201ENST00000519770 C3orf84H3BNL1 204 aa12.15□□□□□ -0.46
IGHV3-52-201ENST00000519770 H7C423 109 aa12.15□□□□□ -0.46
IGHV3-52-201ENST00000519770 AMMECR1LQ6DCA0 310 aa12.15□□□□□ -0.46
IGHV3-52-201ENST00000519770 UBE2DNLQ8IWF7 75 aa12.15□□□□□ -0.46
IGHV3-52-201ENST00000519770 URB1-AS1Q96HZ7 61 aa12.15□□□□□ -0.46
IGHV3-52-201ENST00000519770 APLNQ9ULZ1 77 aa12.15□□□□□ -0.46
IGHV3-52-201ENST00000519770 ESRGQ1W209 222 aa12.14□□□□□ -0.47
IGHV3-52-201ENST00000519770 DGAT2L7PQ6IED9 249 aa12.14□□□□□ -0.47
IGHV3-52-201ENST00000519770 NTM-AS1Q6ZSK4 140 aa12.14□□□□□ -0.47
IGHV3-52-201ENST00000519770 ESDP10768 282 aa12.13□□□□□ -0.47
IGHV3-52-201ENST00000519770 C2orf66Q6UXQ4 117 aa12.13□□□□□ -0.47
IGHV3-52-201ENST00000519770 C20orf203Q8NBC4 194 aa12.13□□□□□ -0.47
IGHV3-52-201ENST00000519770 TMEM101Q96IK0 257 aa12.13□□□□□ -0.47
IGHV3-52-201ENST00000519770 CHCHD7Q9BUK0 85 aa12.13□□□□□ -0.47
IGHV3-52-201ENST00000519770 SNRPEP62304 92 aaKnown RBP12.12□□□□□ -0.47
IGHV3-52-201ENST00000519770 FAM19A2Q8N3H0 131 aa12.12□□□□□ -0.47
IGHV3-52-201ENST00000519770 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.11□□□□□ -0.47
IGHV3-52-201ENST00000519770 A0A087WX48 190 aa12.11□□□□□ -0.47
IGHV3-52-201ENST00000519770 IGKV2-29A2NJV5 120 aaPredicted RBP12.11□□□□□ -0.47
IGHV3-52-201ENST00000519770 GAGE6Q13070 117 aa12.11□□□□□ -0.47
IGHV3-52-201ENST00000519770 PMCHL1Q16048 86 aa12.11□□□□□ -0.47
IGHV3-52-201ENST00000519770 TOMM6Q96B49 74 aa12.11□□□□□ -0.47
IGHV3-52-201ENST00000519770 SCGB3A1Q96QR1 104 aa12.11□□□□□ -0.47
IGHV3-52-201ENST00000519770 NUPR1O60356 82 aa12.1□□□□□ -0.47
IGHV3-52-201ENST00000519770 PDZD11Q5EBL8 140 aa12.1□□□□□ -0.47
IGHV3-52-201ENST00000519770 SPANXA1Q9NS26 97 aa12.1□□□□□ -0.47
IGHV3-52-201ENST00000519770 HSPB8Q9UJY1 196 aa12.1□□□□□ -0.47
IGHV3-52-201ENST00000519770 MRPS16Q9Y3D3 137 aaKnown RBP12.1□□□□□ -0.47
IGHV3-52-201ENST00000519770 ATP5LO75964 103 aa12.09□□□□□ -0.47
IGHV3-52-201ENST00000519770 LEPROTL1O95214 131 aa12.09□□□□□ -0.47
IGHV3-52-201ENST00000519770 FGF6P10767 208 aa12.09□□□□□ -0.47
IGHV3-52-201ENST00000519770 ZNF25P17030 456 aaPredicted RBP12.09□□□□□ -0.47
IGHV3-52-201ENST00000519770 LINC00310P59036 64 aa12.09□□□□□ -0.47
IGHV3-52-201ENST00000519770 RPL39P62891 51 aaKnown RBP12.09□□□□□ -0.47
IGHV3-52-201ENST00000519770 PAPPA-AS1Q5QFB9 102 aa12.09□□□□□ -0.47
IGHV3-52-201ENST00000519770 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.08□□□□□ -0.48
IGHV3-52-201ENST00000519770 Q6ZN92 141 aa12.08□□□□□ -0.48
IGHV3-52-201ENST00000519770 OR5A1Q8NGJ0 315 aa12.08□□□□□ -0.48
IGHV3-52-201ENST00000519770 TIMM21Q9BVV7 248 aa12.08□□□□□ -0.48
IGHV3-52-201ENST00000519770 LINC00588Q9Y4M8 146 aa12.08□□□□□ -0.48
IGHV3-52-201ENST00000519770 C5orf52A6NGY3 159 aa12.07□□□□□ -0.48
IGHV3-52-201ENST00000519770 FABP4P15090 132 aa12.07□□□□□ -0.48
IGHV3-52-201ENST00000519770 ERASQ7Z444 233 aa12.07□□□□□ -0.48
IGHV3-52-201ENST00000519770 TMEM141Q96I45 108 aa12.07□□□□□ -0.48
IGHV3-52-201ENST00000519770 NPSP0C0P6 89 aa12.06□□□□□ -0.48
IGHV3-52-201ENST00000519770 CASC10Q5T4H9 136 aa12.06□□□□□ -0.48
IGHV3-52-201ENST00000519770 MRPL52Q86TS9 123 aaKnown RBP12.06□□□□□ -0.48
IGHV3-52-201ENST00000519770 HIST3H2BBQ8N257 126 aa12.06□□□□□ -0.48
IGHV3-52-201ENST00000519770 PACRGQ96M98 296 aaPredicted RBP12.06□□□□□ -0.48
IGHV3-52-201ENST00000519770 PYGO1Q9Y3Y4 419 aa12.06□□□□□ -0.48
IGHV3-52-201ENST00000519770 SIVA1O15304 175 aa12.05□□□□□ -0.48
IGHV3-52-201ENST00000519770 TIMM17AQ99595 171 aa12.05□□□□□ -0.48
IGHV3-52-201ENST00000519770 UPK3BQ9BT76 320 aa12.05□□□□□ -0.48
IGHV3-52-201ENST00000519770 UBE2D4Q9Y2X8 147 aa12.05□□□□□ -0.48
IGHV3-52-201ENST00000519770 CSDC2Q9Y534 153 aaKnown RBP12.05□□□□□ -0.48
IGHV3-52-201ENST00000519770 TRAV9-2A0A087WT02 112 aa12.04□□□□□ -0.48
IGHV3-52-201ENST00000519770 A0A1B0GUV1 79 aa12.04□□□□□ -0.48
IGHV3-52-201ENST00000519770 IFI27L1Q96BM0 104 aa12.04□□□□□ -0.48
IGHV3-52-201ENST00000519770 A0A096LNJ9 63 aa12.03□□□□□ -0.48
IGHV3-52-201ENST00000519770 PRSS1P07477 247 aa12.03□□□□□ -0.48
IGHV3-52-201ENST00000519770 RBX1P62877 108 aa12.03□□□□□ -0.48
IGHV3-52-201ENST00000519770 WFDC10BQ8IUB3 73 aa12.03□□□□□ -0.48
IGHV3-52-201ENST00000519770 C2orf88Q9BSF0 95 aa12.03□□□□□ -0.48
IGHV3-52-201ENST00000519770 MAP1LC3CQ9BXW4 147 aa12.03□□□□□ -0.48
IGHV3-52-201ENST00000519770 VCX2Q9H322 139 aa12.03□□□□□ -0.48
IGHV3-52-201ENST00000519770 IGIPA6NJ69 53 aa12.02□□□□□ -0.49
IGHV3-52-201ENST00000519770 IGHV3-30P01768 117 aa12.02□□□□□ -0.49
IGHV3-52-201ENST00000519770 IGHV3-33P01772 117 aa12.02□□□□□ -0.49
IGHV3-52-201ENST00000519770 ANGP03950 147 aaKnown RBP12.02□□□□□ -0.49
IGHV3-52-201ENST00000519770 IGHV3-30-3P0DP02 117 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms