RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 C9orf92A6NGG3 77 aa3.43□□□□□ -1.86
CTNNA1-216ENST00000519489 ESDP10768 282 aa3.43□□□□□ -1.86
CTNNA1-216ENST00000519489 TAS2R19P59542 299 aa3.43□□□□□ -1.86
CTNNA1-216ENST00000519489 CTF1Q16619 201 aa3.43□□□□□ -1.86
CTNNA1-216ENST00000519489 DNLZQ5SXM8 178 aa3.43□□□□□ -1.86
CTNNA1-216ENST00000519489 TMEM229BQ8NBD8 167 aa3.43□□□□□ -1.86
CTNNA1-216ENST00000519489 ISOC2Q96AB3 205 aa3.43□□□□□ -1.86
CTNNA1-216ENST00000519489 C2orf48Q96LS8 159 aa3.43□□□□□ -1.86
CTNNA1-216ENST00000519489 HMCN1Q96RW7 5635 aa3.42□□□□□ -1.86
CTNNA1-216ENST00000519489 KRBOX1C9JBD0 128 aa3.42□□□□□ -1.86
CTNNA1-216ENST00000519489 RPL12P30050 165 aaKnown RBP3.42□□□□□ -1.86
CTNNA1-216ENST00000519489 CRIP1P50238 77 aa3.42□□□□□ -1.86
CTNNA1-216ENST00000519489 MZT2AQ6P582 158 aa3.42□□□□□ -1.86
CTNNA1-216ENST00000519489 Q8NBF4 154 aa3.42□□□□□ -1.86
CTNNA1-216ENST00000519489 OR2D3Q8NGH3 330 aa3.42□□□□□ -1.86
CTNNA1-216ENST00000519489 DYNC2LI1Q8TCX1 351 aa3.42□□□□□ -1.86
CTNNA1-216ENST00000519489 GGACTQ9BVM4 153 aa3.42□□□□□ -1.86
CTNNA1-216ENST00000519489 SMDT1Q9H4I9 107 aa3.42□□□□□ -1.86
CTNNA1-216ENST00000519489 SMIM31A0A1B0GVY4 71 aa3.41□□□□□ -1.86
CTNNA1-216ENST00000519489 M0R036 132 aa3.41□□□□□ -1.86
CTNNA1-216ENST00000519489 TLX1NBP0CAT3 122 aa3.41□□□□□ -1.86
CTNNA1-216ENST00000519489 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.41□□□□□ -1.86
CTNNA1-216ENST00000519489 OTORQ9NRC9 128 aa3.41□□□□□ -1.86
CTNNA1-216ENST00000519489 C6orf48Q9UBA6 75 aa3.41□□□□□ -1.86
CTNNA1-216ENST00000519489 C22orf24Q9Y442 160 aa3.41□□□□□ -1.86
CTNNA1-216ENST00000519489 B4DEV8 164 aa3.4□□□□□ -1.87
CTNNA1-216ENST00000519489 TSC22D2O75157 780 aa3.4□□□□□ -1.87
CTNNA1-216ENST00000519489 DEFA3P59666 94 aa3.4□□□□□ -1.87
CTNNA1-216ENST00000519489 CD164L2Q6UWJ8 174 aa3.4□□□□□ -1.87
CTNNA1-216ENST00000519489 PACRGLQ8N7B6 248 aa3.4□□□□□ -1.87
CTNNA1-216ENST00000519489 MED28Q9H204 178 aa3.4□□□□□ -1.87
CTNNA1-216ENST00000519489 C11orf1Q9H5F2 150 aa3.4□□□□□ -1.87
CTNNA1-216ENST00000519489 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.39□□□□□ -1.87
CTNNA1-216ENST00000519489 MUC21A0A140T8X8 626 aa3.39□□□□□ -1.87
CTNNA1-216ENST00000519489 IGKV2-29A2NJV5 120 aaPredicted RBP3.39□□□□□ -1.87
CTNNA1-216ENST00000519489 M0QY20 66 aa3.39□□□□□ -1.87
CTNNA1-216ENST00000519489 ATP5HO75947 161 aa3.39□□□□□ -1.87
CTNNA1-216ENST00000519489 ANXA3P12429 323 aa3.39□□□□□ -1.87
CTNNA1-216ENST00000519489 NKX2-5P52952 324 aaPredicted RBP3.39□□□□□ -1.87
CTNNA1-216ENST00000519489 UBE2L3P68036 154 aaKnown RBP3.39□□□□□ -1.87
CTNNA1-216ENST00000519489 SMUG1Q53HV7 270 aa3.39□□□□□ -1.87
CTNNA1-216ENST00000519489 UNQ6190/PRO20217Q6UXQ8 127 aa3.39□□□□□ -1.87
CTNNA1-216ENST00000519489 PRNTQ86SH4 94 aa3.39□□□□□ -1.87
CTNNA1-216ENST00000519489 CLVS1Q8IUQ0 354 aaPredicted RBP3.39□□□□□ -1.87
CTNNA1-216ENST00000519489 OR10AG1Q8NH19 301 aa3.39□□□□□ -1.87
CTNNA1-216ENST00000519489 MRPL35Q9NZE8 188 aaKnown RBP3.39□□□□□ -1.87
CTNNA1-216ENST00000519489 TMSB15BA0A087X1C1 80 aa3.38□□□□□ -1.87
CTNNA1-216ENST00000519489 UBE2L5PA0A1B0GUS4 154 aa3.38□□□□□ -1.87
CTNNA1-216ENST00000519489 C7orf66A4D0T2 115 aa3.38□□□□□ -1.87
CTNNA1-216ENST00000519489 UBE2L6O14933 153 aa3.38□□□□□ -1.87
CTNNA1-216ENST00000519489 OR7C2O60412 319 aa3.38□□□□□ -1.87
CTNNA1-216ENST00000519489 HPGDSO60760 199 aa3.38□□□□□ -1.87
CTNNA1-216ENST00000519489 CST7O76096 145 aa3.38□□□□□ -1.87
CTNNA1-216ENST00000519489 NTF3P20783 257 aa3.38□□□□□ -1.87
CTNNA1-216ENST00000519489 CTRLP40313 264 aa3.38□□□□□ -1.87
CTNNA1-216ENST00000519489 GABARAPL2P60520 117 aa3.38□□□□□ -1.87
CTNNA1-216ENST00000519489 Q86TA4 180 aa3.38□□□□□ -1.87
CTNNA1-216ENST00000519489 ZFP82Q8N141 532 aa3.38□□□□□ -1.87
CTNNA1-216ENST00000519489 PGLYRP4Q96LB8 373 aa3.38□□□□□ -1.87
CTNNA1-216ENST00000519489 DISC1C4P0D8 188 aa3.37□□□□□ -1.87
CTNNA1-216ENST00000519489 SPINK1P00995 79 aa3.37□□□□□ -1.87
CTNNA1-216ENST00000519489 APOA1P02647 267 aa3.37□□□□□ -1.87
CTNNA1-216ENST00000519489 TPT1P13693 172 aaKnown RBP3.37□□□□□ -1.87
CTNNA1-216ENST00000519489 TMBIM6P55061 237 aa3.37□□□□□ -1.87
CTNNA1-216ENST00000519489 BAXQ07812 192 aa3.37□□□□□ -1.87
CTNNA1-216ENST00000519489 SPAG11BQ08648 103 aa3.37□□□□□ -1.87
CTNNA1-216ENST00000519489 SPANXN2Q5MJ10 180 aa3.37□□□□□ -1.87
CTNNA1-216ENST00000519489 SVIPQ8NHG7 77 aa3.37□□□□□ -1.87
CTNNA1-216ENST00000519489 CMTM2Q8TAZ6 248 aa3.37□□□□□ -1.87
CTNNA1-216ENST00000519489 PLEKHB2Q96CS7 222 aa3.37□□□□□ -1.87
CTNNA1-216ENST00000519489 IMMP2LQ96T52 175 aa3.37□□□□□ -1.87
CTNNA1-216ENST00000519489 LYRM2Q9NU23 88 aaPredicted RBP3.37□□□□□ -1.87
CTNNA1-216ENST00000519489 UQCC1Q9NVA1 299 aa3.37□□□□□ -1.87
CTNNA1-216ENST00000519489 RPL37AP8A6NKH3 93 aa3.36□□□□□ -1.87
CTNNA1-216ENST00000519489 G3V3Q6 166 aa3.36□□□□□ -1.87
CTNNA1-216ENST00000519489 TCRAP04437 139 aa3.36□□□□□ -1.87
CTNNA1-216ENST00000519489 TAS2R30P59541 319 aa3.36□□□□□ -1.87
CTNNA1-216ENST00000519489 RNASEKQ6P5S7 137 aaKnown RBP3.36□□□□□ -1.87
CTNNA1-216ENST00000519489 C5orf38Q86SI9 138 aa3.36□□□□□ -1.87
CTNNA1-216ENST00000519489 NDFIP1Q9BT67 221 aa3.36□□□□□ -1.87
CTNNA1-216ENST00000519489 RBM38Q9H0Z9 239 aaKnown RBP3.36□□□□□ -1.87
CTNNA1-216ENST00000519489 MBD2Q9UBB5 411 aa3.36□□□□□ -1.87
CTNNA1-216ENST00000519489 RSL24D1Q9UHA3 163 aaKnown RBP3.36□□□□□ -1.87
CTNNA1-216ENST00000519489 NDUFA12Q9UI09 145 aa3.36□□□□□ -1.87
CTNNA1-216ENST00000519489 PIGBOS1A0A0B4J2F0 54 aa3.35□□□□□ -1.87
CTNNA1-216ENST00000519489 FABP5P3A8MUU1 101 aa3.35□□□□□ -1.87
CTNNA1-216ENST00000519489 COX7A2LO14548 114 aa3.35□□□□□ -1.87
CTNNA1-216ENST00000519489 PRYO14603 147 aa3.35□□□□□ -1.87
CTNNA1-216ENST00000519489 RPL37P61927 97 aaKnown RBP3.35□□□□□ -1.87
CTNNA1-216ENST00000519489 PRLHP81277 87 aa3.35□□□□□ -1.87
CTNNA1-216ENST00000519489 FLI1Q01543 452 aaPredicted RBP3.35□□□□□ -1.87
CTNNA1-216ENST00000519489 NPCDR1Q9BY65 106 aa3.35□□□□□ -1.87
CTNNA1-216ENST00000519489 TRAV34A0A0B4J273 112 aa3.34□□□□□ -1.87
CTNNA1-216ENST00000519489 FAM25AB3EWG3 89 aa3.34□□□□□ -1.87
CTNNA1-216ENST00000519489 FAM25CB3EWG5 89 aa3.34□□□□□ -1.87
CTNNA1-216ENST00000519489 FAM25GB3EWG6 89 aa3.34□□□□□ -1.87
CTNNA1-216ENST00000519489 SH2D1AO60880 128 aa3.34□□□□□ -1.87
CTNNA1-216ENST00000519489 PPP1R1AQ13522 171 aa3.34□□□□□ -1.87
CTNNA1-216ENST00000519489 AMMECR1LQ6DCA0 310 aa3.34□□□□□ -1.87
CTNNA1-216ENST00000519489 SCGB3A2Q96PL1 93 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms