RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 KRTAP26-1Q6PEX3 210 aa7.01□□□□□ -1.29
PVT1-208ENST00000519481 LYZL1Q6UWQ5 148 aa7.01□□□□□ -1.29
PVT1-208ENST00000519481 DPH3Q96FX2 82 aa7.01□□□□□ -1.29
PVT1-208ENST00000519481 PGLYRP4Q96LB8 373 aa7.01□□□□□ -1.29
PVT1-208ENST00000519481 NTF3P20783 257 aa7□□□□□ -1.29
PVT1-208ENST00000519481 AMTP48728 403 aa7□□□□□ -1.29
PVT1-208ENST00000519481 SULT1A2P50226 295 aa7□□□□□ -1.29
PVT1-208ENST00000519481 C20orf203Q8NBC4 194 aa7□□□□□ -1.29
PVT1-208ENST00000519481 IGHV3-64A0A075B6Q5 118 aa6.99□□□□□ -1.29
PVT1-208ENST00000519481 TAGLN2P37802 199 aaKnown RBP6.99□□□□□ -1.29
PVT1-208ENST00000519481 CNBPP62633 177 aaKnown RBP6.99□□□□□ -1.29
PVT1-208ENST00000519481 TWIST1Q15672 202 aa6.99□□□□□ -1.29
PVT1-208ENST00000519481 CFAP161Q6P656 301 aa6.99□□□□□ -1.29
PVT1-208ENST00000519481 SDIM1Q6ZPB5 146 aa6.99□□□□□ -1.29
PVT1-208ENST00000519481 SMIM15Q7Z3B0 74 aa6.99□□□□□ -1.29
PVT1-208ENST00000519481 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.99□□□□□ -1.29
PVT1-208ENST00000519481 IGLV4-60A0A075B6I1 120 aa6.98□□□□□ -1.29
PVT1-208ENST00000519481 BCL2P10415 239 aa6.98□□□□□ -1.29
PVT1-208ENST00000519481 C9orf62Q8N4C0 152 aa6.98□□□□□ -1.29
PVT1-208ENST00000519481 RNF185Q96GF1 192 aa6.98□□□□□ -1.29
PVT1-208ENST00000519481 CTRLP40313 264 aa6.97□□□□□ -1.29
PVT1-208ENST00000519481 AMMECR1LQ6DCA0 310 aa6.97□□□□□ -1.29
PVT1-208ENST00000519481 NUDT10Q8NFP7 164 aa6.97□□□□□ -1.29
PVT1-208ENST00000519481 NUDT11Q96G61 164 aa6.97□□□□□ -1.29
PVT1-208ENST00000519481 TRBV20OR9-2A0A075B6H5 130 aa6.96□□□□□ -1.3
PVT1-208ENST00000519481 IGKV3OR2-268A0A0C4DH90 116 aa6.96□□□□□ -1.3
PVT1-208ENST00000519481 SLC51BQ86UW2 128 aa6.96□□□□□ -1.3
PVT1-208ENST00000519481 RPP21Q9H633 154 aaKnown RBP6.96□□□□□ -1.3
PVT1-208ENST00000519481 PLA2G2DQ9UNK4 145 aa6.96□□□□□ -1.3
PVT1-208ENST00000519481 GAGE12HA6NDE8 117 aa6.95□□□□□ -1.3
PVT1-208ENST00000519481 PANO1I0J062 215 aa6.95□□□□□ -1.3
PVT1-208ENST00000519481 NCR2O95944 276 aa6.95□□□□□ -1.3
PVT1-208ENST00000519481 CIRBPQ14011 172 aaKnown RBP6.95□□□□□ -1.3
PVT1-208ENST00000519481 TEX261Q6UWH6 196 aa6.95□□□□□ -1.3
PVT1-208ENST00000519481 CNFNQ9BYD5 112 aa6.95□□□□□ -1.3
PVT1-208ENST00000519481 GFRA4Q9GZZ7 299 aa6.95□□□□□ -1.3
PVT1-208ENST00000519481 LRP1Q07954 4544 aaKnown RBP6.94□□□□□ -1.3
PVT1-208ENST00000519481 APCSP02743 223 aa6.94□□□□□ -1.3
PVT1-208ENST00000519481 RNASEKQ6P5S7 137 aaKnown RBP6.94□□□□□ -1.3
PVT1-208ENST00000519481 Q6ZRU5 148 aa6.94□□□□□ -1.3
PVT1-208ENST00000519481 GATD1Q8NB37 220 aa6.94□□□□□ -1.3
PVT1-208ENST00000519481 C7orf33Q8WU49 177 aa6.94□□□□□ -1.3
PVT1-208ENST00000519481 RNASE7Q9H1E1 156 aaKnown RBP6.94□□□□□ -1.3
PVT1-208ENST00000519481 A0A087WYN8 130 aa6.93□□□□□ -1.3
PVT1-208ENST00000519481 TRAV26-2A0A0B4J265 109 aa6.93□□□□□ -1.3
PVT1-208ENST00000519481 H7C423 109 aa6.93□□□□□ -1.3
PVT1-208ENST00000519481 GATCO43716 136 aaKnown RBP6.93□□□□□ -1.3
PVT1-208ENST00000519481 RPS10P46783 165 aaKnown RBP6.93□□□□□ -1.3
PVT1-208ENST00000519481 HNRNPA3P51991 378 aaKnown RBP6.93□□□□□ -1.3
PVT1-208ENST00000519481 TCTE3Q8IZS6 198 aa6.93□□□□□ -1.3
PVT1-208ENST00000519481 OCC1Q8TAD7 63 aa6.93□□□□□ -1.3
PVT1-208ENST00000519481 BORCS7Q96B45 105 aa6.93□□□□□ -1.3
PVT1-208ENST00000519481 BTF3L4Q96K17 158 aa6.93□□□□□ -1.3
PVT1-208ENST00000519481 PKHD1L1Q86WI1 4243 aa6.93□□□□□ -1.3
PVT1-208ENST00000519481 A8MWL6 223 aa6.92□□□□□ -1.3
PVT1-208ENST00000519481 SLPIP03973 132 aa6.92□□□□□ -1.3
PVT1-208ENST00000519481 CHTF8P0CG12 524 aa6.92□□□□□ -1.3
PVT1-208ENST00000519481 PMCHP20382 165 aa6.92□□□□□ -1.3
PVT1-208ENST00000519481 SPACA4Q8TDM5 124 aa6.92□□□□□ -1.3
PVT1-208ENST00000519481 CHCHD10Q8WYQ3 142 aaPredicted RBP6.92□□□□□ -1.3
PVT1-208ENST00000519481 TMEM101Q96IK0 257 aa6.92□□□□□ -1.3
PVT1-208ENST00000519481 PKIGQ9Y2B9 76 aa6.92□□□□□ -1.3
PVT1-208ENST00000519481 FAT3Q8TDW7 4589 aa6.92□□□□□ -1.3
PVT1-208ENST00000519481 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.91□□□□□ -1.3
PVT1-208ENST00000519481 IGKV2-29A2NJV5 120 aaPredicted RBP6.91□□□□□ -1.3
PVT1-208ENST00000519481 SDHAF1A6NFY7 115 aa6.91□□□□□ -1.3
PVT1-208ENST00000519481 TMEM250H0YL14 139 aa6.91□□□□□ -1.3
PVT1-208ENST00000519481 K7EN84 100 aa6.91□□□□□ -1.3
PVT1-208ENST00000519481 NDUFS6O75380 124 aaKnown RBP6.91□□□□□ -1.3
PVT1-208ENST00000519481 FGF6P10767 208 aa6.91□□□□□ -1.3
PVT1-208ENST00000519481 ZNF25P17030 456 aaPredicted RBP6.91□□□□□ -1.3
PVT1-208ENST00000519481 COX6A2Q02221 97 aa6.91□□□□□ -1.3
PVT1-208ENST00000519481 HIGD2BQ4VC39 106 aa6.91□□□□□ -1.3
PVT1-208ENST00000519481 Q6ZNX1 250 aa6.91□□□□□ -1.3
PVT1-208ENST00000519481 C15orf56Q8N910 161 aa6.91□□□□□ -1.3
PVT1-208ENST00000519481 RPL39LQ96EH5 51 aaKnown RBP6.91□□□□□ -1.3
PVT1-208ENST00000519481 I3L3M4 83 aa6.9□□□□□ -1.3
PVT1-208ENST00000519481 BLOC1S1P78537 153 aa6.9□□□□□ -1.3
PVT1-208ENST00000519481 MAJINQ3KP22 176 aa6.9□□□□□ -1.3
PVT1-208ENST00000519481 OR5A1Q8NGJ0 315 aa6.9□□□□□ -1.3
PVT1-208ENST00000519481 GTSF1Q8WW33 167 aa6.9□□□□□ -1.3
PVT1-208ENST00000519481 FAM210AQ96ND0 272 aa6.9□□□□□ -1.3
PVT1-208ENST00000519481 PLAC8Q9NZF1 115 aa6.9□□□□□ -1.3
PVT1-208ENST00000519481 GVQW2A0A096LPI5 108 aaPredicted RBP6.89□□□□□ -1.31
PVT1-208ENST00000519481 IGKV2-24A0A0C4DH68 120 aa6.89□□□□□ -1.31
PVT1-208ENST00000519481 PHOX2AO14813 284 aa6.89□□□□□ -1.31
PVT1-208ENST00000519481 CEBPGP53567 150 aa6.89□□□□□ -1.31
PVT1-208ENST00000519481 FAM231DQ6ZW35 169 aa6.89□□□□□ -1.31
PVT1-208ENST00000519481 ST20Q9HBF5 79 aa6.89□□□□□ -1.31
PVT1-208ENST00000519481 LINC00474Q9P2X8 69 aa6.89□□□□□ -1.31
PVT1-208ENST00000519481 TRBV6-5A0A0K0K1A5 114 aa6.88□□□□□ -1.31
PVT1-208ENST00000519481 XCL1P47992 114 aa6.88□□□□□ -1.31
PVT1-208ENST00000519481 FOXA3P55318 350 aaPredicted RBP6.88□□□□□ -1.31
PVT1-208ENST00000519481 SS18Q15532 418 aa6.88□□□□□ -1.31
PVT1-208ENST00000519481 CT83Q5H943 113 aa6.88□□□□□ -1.31
PVT1-208ENST00000519481 STPG4Q8N801 248 aa6.88□□□□□ -1.31
PVT1-208ENST00000519481 PRSS3P2Q8NHM4 247 aa6.88□□□□□ -1.31
PVT1-208ENST00000519481 MRAP2Q96G30 205 aa6.88□□□□□ -1.31
PVT1-208ENST00000519481 IGHV1-58A0A0C4DH39 117 aa6.87□□□□□ -1.31
PVT1-208ENST00000519481 LINC00959A0A1B0GUT2 108 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms