RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 UBE2D4Q9Y2X8 147 aa9.91□□□□□ -0.82
PABPC1-208ENST00000519004 CEP290O15078 2479 aa9.91□□□□□ -0.82
PABPC1-208ENST00000519004 ECSCRQ19T08 205 aa9.91□□□□□ -0.82
PABPC1-208ENST00000519004 PRORYQ9H606 182 aa9.91□□□□□ -0.82
PABPC1-208ENST00000519004 TACC2O95359 2948 aa9.9□□□□□ -0.82
PABPC1-208ENST00000519004 LYNX1G3V0Z9 82 aa9.9□□□□□ -0.82
PABPC1-208ENST00000519004 LYNX1P0DP58 116 aa9.9□□□□□ -0.82
PABPC1-208ENST00000519004 PSMB8P28062 276 aa9.9□□□□□ -0.82
PABPC1-208ENST00000519004 TMEM86BQ8N661 226 aa9.9□□□□□ -0.82
PABPC1-208ENST00000519004 C14orf132Q9NPU4 83 aa9.9□□□□□ -0.82
PABPC1-208ENST00000519004 FAM236DA0A1B0GTK5 79 aa9.9□□□□□ -0.83
PABPC1-208ENST00000519004 ODF3BA8MYP8 253 aa9.9□□□□□ -0.83
PABPC1-208ENST00000519004 FAM236CP0DP71 79 aa9.9□□□□□ -0.83
PABPC1-208ENST00000519004 ZNF415Q09FC8 603 aa9.9□□□□□ -0.83
PABPC1-208ENST00000519004 PIMREGQ9BSJ6 248 aa9.9□□□□□ -0.83
PABPC1-208ENST00000519004 PKIGQ9Y2B9 76 aa9.9□□□□□ -0.83
PABPC1-208ENST00000519004 PKDREJQ9NTG1 2253 aa9.89□□□□□ -0.83
PABPC1-208ENST00000519004 POLEQ07864 2286 aa9.89□□□□□ -0.83
PABPC1-208ENST00000519004 KLLNB2CW77 178 aa9.88□□□□□ -0.83
PABPC1-208ENST00000519004 TMEM243Q9BU79 118 aa9.88□□□□□ -0.83
PABPC1-208ENST00000519004 TRAV12-2A0A075B6T6 113 aa9.88□□□□□ -0.83
PABPC1-208ENST00000519004 IGHG2P01859 326 aa9.88□□□□□ -0.83
PABPC1-208ENST00000519004 Q8N9W7 124 aa9.88□□□□□ -0.83
PABPC1-208ENST00000519004 CIRBPQ14011 172 aaKnown RBP9.87□□□□□ -0.83
PABPC1-208ENST00000519004 IGFL2Q6UWQ7 119 aa9.87□□□□□ -0.83
PABPC1-208ENST00000519004 OBSCN-AS1Q96MR7 158 aa9.87□□□□□ -0.83
PABPC1-208ENST00000519004 C16orf95Q9H693 158 aa9.87□□□□□ -0.83
PABPC1-208ENST00000519004 SERP1Q9Y6X1 66 aa9.87□□□□□ -0.83
PABPC1-208ENST00000519004 ATP6V0E1O15342 81 aa9.87□□□□□ -0.83
PABPC1-208ENST00000519004 TRBV12-3P01733 135 aa9.87□□□□□ -0.83
PABPC1-208ENST00000519004 HOXD3P31249 432 aaPredicted RBP9.87□□□□□ -0.83
PABPC1-208ENST00000519004 HILS1P60008 231 aa9.87□□□□□ -0.83
PABPC1-208ENST00000519004 ABCA4P78363 2273 aa9.87□□□□□ -0.83
PABPC1-208ENST00000519004 A0A0U1RRA0 63 aa9.86□□□□□ -0.83
PABPC1-208ENST00000519004 GHRHP01286 108 aa9.86□□□□□ -0.83
PABPC1-208ENST00000519004 CEP250Q9BV73 2442 aa9.86□□□□□ -0.83
PABPC1-208ENST00000519004 IGHV3-16A0A0C4DH30 117 aa9.85□□□□□ -0.83
PABPC1-208ENST00000519004 AVPP01185 164 aa9.85□□□□□ -0.83
PABPC1-208ENST00000519004 RPL28P46779 137 aaKnown RBP9.85□□□□□ -0.83
PABPC1-208ENST00000519004 CDKN2A-AS1Q9UH64 79 aa9.85□□□□□ -0.83
PABPC1-208ENST00000519004 G3V318 75 aa9.85□□□□□ -0.83
PABPC1-208ENST00000519004 Q9H8V8 135 aa9.85□□□□□ -0.83
PABPC1-208ENST00000519004 ZNF625Q96I27 306 aaPredicted RBP9.84□□□□□ -0.83
PABPC1-208ENST00000519004 C20orf197Q8N268 126 aa9.84□□□□□ -0.83
PABPC1-208ENST00000519004 RBMY1BA6NDE4 496 aaKnown RBP9.83□□□□□ -0.84
PABPC1-208ENST00000519004 RBMY1EA6NEQ0 496 aaKnown RBP9.83□□□□□ -0.84
PABPC1-208ENST00000519004 E7EQL1 145 aa9.83□□□□□ -0.84
PABPC1-208ENST00000519004 RBMY1DP0C7P1 496 aaKnown RBP9.83□□□□□ -0.84
PABPC1-208ENST00000519004 RBMY1A1P0DJD3 496 aaKnown RBP9.83□□□□□ -0.84
PABPC1-208ENST00000519004 RBMY1CP0DJD4 496 aa9.83□□□□□ -0.84
PABPC1-208ENST00000519004 XCL1P47992 114 aa9.83□□□□□ -0.84
PABPC1-208ENST00000519004 RBMY1FQ15415 496 aaKnown RBP9.83□□□□□ -0.84
PABPC1-208ENST00000519004 UNQ9165/PRO28630Q6UXU0 137 aa9.83□□□□□ -0.84
PABPC1-208ENST00000519004 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.83□□□□□ -0.84
PABPC1-208ENST00000519004 XCL2Q9UBD3 114 aa9.83□□□□□ -0.84
PABPC1-208ENST00000519004 HIST2H2BCQ6DN03 193 aa9.83□□□□□ -0.84
PABPC1-208ENST00000519004 HIST2H2BDQ6DRA6 164 aa9.83□□□□□ -0.84
PABPC1-208ENST00000519004 FP248Q71RG6 208 aaPredicted RBP9.83□□□□□ -0.84
PABPC1-208ENST00000519004 SEC61GP60059 68 aa9.82□□□□□ -0.84
PABPC1-208ENST00000519004 MINOS1Q5TGZ0 78 aa9.82□□□□□ -0.84
PABPC1-208ENST00000519004 IGLV5-45A0A087WSX0 123 aa9.82□□□□□ -0.84
PABPC1-208ENST00000519004 A0A087WYN8 130 aa9.82□□□□□ -0.84
PABPC1-208ENST00000519004 H7BZZ5 65 aa9.82□□□□□ -0.84
PABPC1-208ENST00000519004 COPS9Q8WXC6 57 aa9.82□□□□□ -0.84
PABPC1-208ENST00000519004 TRAV23DV6A0A075B6W5 121 aa9.81□□□□□ -0.84
PABPC1-208ENST00000519004 TPRP12270 2363 aaKnown RBP9.81□□□□□ -0.84
PABPC1-208ENST00000519004 EDN2P20800 178 aa9.81□□□□□ -0.84
PABPC1-208ENST00000519004 WFDC11Q8NEX6 87 aa9.81□□□□□ -0.84
PABPC1-208ENST00000519004 CHCHD7Q9BUK0 85 aa9.81□□□□□ -0.84
PABPC1-208ENST00000519004 IGKV3-7A0A075B6H7 116 aa9.8□□□□□ -0.84
PABPC1-208ENST00000519004 IGLV5-39A0A0G2JS06 123 aa9.8□□□□□ -0.84
PABPC1-208ENST00000519004 LPAL2Q16609 132 aa9.8□□□□□ -0.84
PABPC1-208ENST00000519004 WFDC9Q8NEX5 89 aa9.8□□□□□ -0.84
PABPC1-208ENST00000519004 NCR3O14931 201 aa9.79□□□□□ -0.84
PABPC1-208ENST00000519004 LYPD5Q6UWN5 251 aa9.79□□□□□ -0.84
PABPC1-208ENST00000519004 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.78□□□□□ -0.84
PABPC1-208ENST00000519004 IGKV2-29A2NJV5 120 aaPredicted RBP9.78□□□□□ -0.84
PABPC1-208ENST00000519004 COX6A2Q02221 97 aa9.78□□□□□ -0.84
PABPC1-208ENST00000519004 PIK3CD-AS1Q5SR53 167 aa9.78□□□□□ -0.84
PABPC1-208ENST00000519004 OVOL2Q9BRP0 275 aa9.78□□□□□ -0.84
PABPC1-208ENST00000519004 SMIM26A0A096LP01 95 aa9.78□□□□□ -0.84
PABPC1-208ENST00000519004 FAM19A1Q7Z5A9 133 aa9.77□□□□□ -0.84
PABPC1-208ENST00000519004 RP1L1Q8IWN7 2480 aaPredicted RBP9.77□□□□□ -0.85
PABPC1-208ENST00000519004 V9GYY9 64 aa9.77□□□□□ -0.85
PABPC1-208ENST00000519004 PROK1P58294 105 aa9.76□□□□□ -0.85
PABPC1-208ENST00000519004 TRAV13-2A0A0B4J235 113 aa9.76□□□□□ -0.85
PABPC1-208ENST00000519004 PF4P02776 101 aa9.76□□□□□ -0.85
PABPC1-208ENST00000519004 LINC00337Q8N6G1 96 aa9.76□□□□□ -0.85
PABPC1-208ENST00000519004 LINC00467Q9BRT7 94 aa9.76□□□□□ -0.85
PABPC1-208ENST00000519004 KNCNA6PVL3 124 aa9.75□□□□□ -0.85
PABPC1-208ENST00000519004 ATP5EP2Q5VTU8 51 aa9.75□□□□□ -0.85
PABPC1-208ENST00000519004 IGHV3-73A0A0B4J1V6 119 aa9.75□□□□□ -0.85
PABPC1-208ENST00000519004 NDUFA4O00483 81 aa9.75□□□□□ -0.85
PABPC1-208ENST00000519004 CCKP06307 115 aa9.75□□□□□ -0.85
PABPC1-208ENST00000519004 Q9UF83 564 aa9.75□□□□□ -0.85
PABPC1-208ENST00000519004 MINOS1-NBL1R4GNA1 71 aa9.75□□□□□ -0.85
PABPC1-208ENST00000519004 BOD1L1Q8NFC6 3051 aa9.75□□□□□ -0.85
PABPC1-208ENST00000519004 CRPP02741 224 aa9.74□□□□□ -0.85
PABPC1-208ENST00000519004 SS18Q15532 418 aa9.74□□□□□ -0.85
PABPC1-208ENST00000519004 C1orf195Q5TG92 126 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 256.8 ms