RNA–Protein interactions for RNA: ENST00000518879.5

FAM49B-209, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5

Gene FAM49B, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-209ENST00000518879 COTL1Q14019 142 aa11.84□□□□□ -0.51
FAM49B-209ENST00000518879 LYZL1Q6UWQ5 148 aa11.84□□□□□ -0.51
FAM49B-209ENST00000518879 NIT2Q9NQR4 276 aa11.84□□□□□ -0.51
FAM49B-209ENST00000518879 IGLV4-60A0A075B6I1 120 aa11.83□□□□□ -0.52
FAM49B-209ENST00000518879 AMTP48728 403 aa11.83□□□□□ -0.52
FAM49B-209ENST00000518879 PANO1I0J062 215 aa11.82□□□□□ -0.52
FAM49B-209ENST00000518879 NTF3P20783 257 aa11.82□□□□□ -0.52
FAM49B-209ENST00000518879 MED9Q9NWA0 146 aa11.82□□□□□ -0.52
FAM49B-209ENST00000518879 HNRNPA3P51991 378 aaKnown RBP11.81□□□□□ -0.52
FAM49B-209ENST00000518879 TWIST1Q15672 202 aa11.81□□□□□ -0.52
FAM49B-209ENST00000518879 CFAP161Q6P656 301 aa11.81□□□□□ -0.52
FAM49B-209ENST00000518879 RNF185Q96GF1 192 aa11.8□□□□□ -0.52
FAM49B-209ENST00000518879 CIRBPQ14011 172 aaKnown RBP11.79□□□□□ -0.52
FAM49B-209ENST00000518879 C9orf62Q8N4C0 152 aa11.79□□□□□ -0.52
FAM49B-209ENST00000518879 GFRA4Q9GZZ7 299 aa11.79□□□□□ -0.52
FAM49B-209ENST00000518879 IGKV3OR2-268A0A0C4DH90 116 aa11.78□□□□□ -0.52
FAM49B-209ENST00000518879 BCL2P10415 239 aa11.78□□□□□ -0.52
FAM49B-209ENST00000518879 CTRLP40313 264 aa11.78□□□□□ -0.52
FAM49B-209ENST00000518879 AMMECR1LQ6DCA0 310 aa11.78□□□□□ -0.52
FAM49B-209ENST00000518879 Q6ZRU5 148 aa11.78□□□□□ -0.52
FAM49B-209ENST00000518879 SMIM15Q7Z3B0 74 aa11.78□□□□□ -0.52
FAM49B-209ENST00000518879 NUDT10Q8NFP7 164 aa11.77□□□□□ -0.53
FAM49B-209ENST00000518879 NUDT11Q96G61 164 aa11.77□□□□□ -0.53
FAM49B-209ENST00000518879 RPP21Q9H633 154 aaKnown RBP11.77□□□□□ -0.53
FAM49B-209ENST00000518879 TRBV20OR9-2A0A075B6H5 130 aa11.76□□□□□ -0.53
FAM49B-209ENST00000518879 A0A087WYN8 130 aa11.76□□□□□ -0.53
FAM49B-209ENST00000518879 GAGE12HA6NDE8 117 aa11.76□□□□□ -0.53
FAM49B-209ENST00000518879 CHTF8P0CG12 524 aa11.76□□□□□ -0.53
FAM49B-209ENST00000518879 TAGLN2P37802 199 aaKnown RBP11.76□□□□□ -0.53
FAM49B-209ENST00000518879 SPACA4Q8TDM5 124 aa11.76□□□□□ -0.53
FAM49B-209ENST00000518879 C7orf33Q8WU49 177 aa11.76□□□□□ -0.53
FAM49B-209ENST00000518879 HMCN2Q8NDA2 5059 aa11.75□□□□□ -0.53
FAM49B-209ENST00000518879 TRAV26-2A0A0B4J265 109 aa11.74□□□□□ -0.53
FAM49B-209ENST00000518879 SLPIP03973 132 aa11.74□□□□□ -0.53
FAM49B-209ENST00000518879 RNASEKQ6P5S7 137 aaKnown RBP11.74□□□□□ -0.53
FAM49B-209ENST00000518879 GATD1Q8NB37 220 aa11.74□□□□□ -0.53
FAM49B-209ENST00000518879 CNFNQ9BYD5 112 aa11.74□□□□□ -0.53
FAM49B-209ENST00000518879 NCR2O95944 276 aa11.73□□□□□ -0.53
FAM49B-209ENST00000518879 APCSP02743 223 aa11.73□□□□□ -0.53
FAM49B-209ENST00000518879 RPS10P46783 165 aaKnown RBP11.73□□□□□ -0.53
FAM49B-209ENST00000518879 C15orf56Q8N910 161 aa11.73□□□□□ -0.53
FAM49B-209ENST00000518879 RNASE7Q9H1E1 156 aaKnown RBP11.73□□□□□ -0.53
FAM49B-209ENST00000518879 COX6A2Q02221 97 aa11.72□□□□□ -0.53
FAM49B-209ENST00000518879 HIGD2BQ4VC39 106 aa11.72□□□□□ -0.53
FAM49B-209ENST00000518879 TEX261Q6UWH6 196 aa11.72□□□□□ -0.53
FAM49B-209ENST00000518879 CHCHD10Q8WYQ3 142 aaPredicted RBP11.72□□□□□ -0.53
FAM49B-209ENST00000518879 H7C423 109 aa11.71□□□□□ -0.53
FAM49B-209ENST00000518879 NDUFS6O75380 124 aaKnown RBP11.71□□□□□ -0.53
FAM49B-209ENST00000518879 Q6ZNX1 250 aa11.71□□□□□ -0.53
FAM49B-209ENST00000518879 SLC51BQ86UW2 128 aa11.71□□□□□ -0.53
FAM49B-209ENST00000518879 RPL39LQ96EH5 51 aaKnown RBP11.71□□□□□ -0.53
FAM49B-209ENST00000518879 PLAC8Q9NZF1 115 aa11.71□□□□□ -0.53
FAM49B-209ENST00000518879 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.7□□□□□ -0.54
FAM49B-209ENST00000518879 IGKV2-29A2NJV5 120 aaPredicted RBP11.7□□□□□ -0.54
FAM49B-209ENST00000518879 PHOX2AO14813 284 aa11.7□□□□□ -0.54
FAM49B-209ENST00000518879 MAJINQ3KP22 176 aa11.7□□□□□ -0.54
FAM49B-209ENST00000518879 IGKV2-24A0A0C4DH68 120 aa11.69□□□□□ -0.54
FAM49B-209ENST00000518879 K7EN84 100 aa11.69□□□□□ -0.54
FAM49B-209ENST00000518879 OCC1Q8TAD7 63 aa11.69□□□□□ -0.54
FAM49B-209ENST00000518879 GTSF1Q8WW33 167 aa11.69□□□□□ -0.54
FAM49B-209ENST00000518879 TMEM101Q96IK0 257 aa11.69□□□□□ -0.54
FAM49B-209ENST00000518879 BTF3L4Q96K17 158 aa11.69□□□□□ -0.54
FAM49B-209ENST00000518879 SDHAF1A6NFY7 115 aa11.68□□□□□ -0.54
FAM49B-209ENST00000518879 MT1HL1P0DM35 61 aa11.68□□□□□ -0.54
FAM49B-209ENST00000518879 FGF6P10767 208 aa11.68□□□□□ -0.54
FAM49B-209ENST00000518879 ZNF25P17030 456 aaPredicted RBP11.68□□□□□ -0.54
FAM49B-209ENST00000518879 PMCHP20382 165 aa11.68□□□□□ -0.54
FAM49B-209ENST00000518879 BORCS7Q96B45 105 aa11.68□□□□□ -0.54
FAM49B-209ENST00000518879 PKIGQ9Y2B9 76 aa11.68□□□□□ -0.54
FAM49B-209ENST00000518879 GVQW2A0A096LPI5 108 aaPredicted RBP11.67□□□□□ -0.54
FAM49B-209ENST00000518879 GATCO43716 136 aaKnown RBP11.67□□□□□ -0.54
FAM49B-209ENST00000518879 A8MWL6 223 aa11.66□□□□□ -0.54
FAM49B-209ENST00000518879 I3L3M4 83 aa11.66□□□□□ -0.54
FAM49B-209ENST00000518879 TCTE3Q8IZS6 198 aa11.66□□□□□ -0.54
FAM49B-209ENST00000518879 STPG4Q8N801 248 aa11.66□□□□□ -0.54
FAM49B-209ENST00000518879 OR5A1Q8NGJ0 315 aa11.66□□□□□ -0.54
FAM49B-209ENST00000518879 PRSS3P2Q8NHM4 247 aa11.66□□□□□ -0.54
FAM49B-209ENST00000518879 UBR4Q5T4S7 5183 aa11.66□□□□□ -0.54
FAM49B-209ENST00000518879 XCL1P47992 114 aa11.65□□□□□ -0.54
FAM49B-209ENST00000518879 FOXA3P55318 350 aaPredicted RBP11.65□□□□□ -0.54
FAM49B-209ENST00000518879 LINC00474Q9P2X8 69 aa11.65□□□□□ -0.54
FAM49B-209ENST00000518879 FOXI1Q12951 378 aa11.64□□□□□ -0.55
FAM49B-209ENST00000518879 LYPD6BQ8NI32 183 aa11.64□□□□□ -0.55
FAM49B-209ENST00000518879 TMEM250H0YL14 139 aa11.63□□□□□ -0.55
FAM49B-209ENST00000518879 CEBPGP53567 150 aa11.63□□□□□ -0.55
FAM49B-209ENST00000518879 MRAP2Q96G30 205 aa11.63□□□□□ -0.55
FAM49B-209ENST00000518879 ST20Q9HBF5 79 aa11.63□□□□□ -0.55
FAM49B-209ENST00000518879 IGHV1-58A0A0C4DH39 117 aa11.62□□□□□ -0.55
FAM49B-209ENST00000518879 PRR3P79522 188 aaKnown RBP11.62□□□□□ -0.55
FAM49B-209ENST00000518879 SS18Q15532 418 aa11.62□□□□□ -0.55
FAM49B-209ENST00000518879 FAM231DQ6ZW35 169 aa11.62□□□□□ -0.55
FAM49B-209ENST00000518879 A0A096LNI7 61 aa11.61□□□□□ -0.55
FAM49B-209ENST00000518879 TRBV6-5A0A0K0K1A5 114 aa11.61□□□□□ -0.55
FAM49B-209ENST00000518879 LINC00959A0A1B0GUT2 108 aa11.61□□□□□ -0.55
FAM49B-209ENST00000518879 CCL25O15444 150 aa11.61□□□□□ -0.55
FAM49B-209ENST00000518879 CARD19Q96LW7 228 aa11.61□□□□□ -0.55
FAM49B-209ENST00000518879 FAM210AQ96ND0 272 aa11.61□□□□□ -0.55
FAM49B-209ENST00000518879 BLOC1S1P78537 153 aa11.6□□□□□ -0.55
FAM49B-209ENST00000518879 CT83Q5H943 113 aa11.6□□□□□ -0.55
FAM49B-209ENST00000518879 TMEM242Q9NWH2 141 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms