RNA–Protein interactions for RNA: ENST00000518447.1

SCUBE2-203, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 2

Gene SCUBE2, Length 462 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-203ENST00000518447 SNAI2O43623 268 aa3.73□□□□□ -1.81
SCUBE2-203ENST00000518447 MBP02144 154 aa3.73□□□□□ -1.81
SCUBE2-203ENST00000518447 AKR1C8PQ5T2L2 129 aa3.73□□□□□ -1.81
SCUBE2-203ENST00000518447 STPG4Q8N801 248 aa3.73□□□□□ -1.81
SCUBE2-203ENST00000518447 STOML3Q8TAV4 291 aa3.73□□□□□ -1.81
SCUBE2-203ENST00000518447 LINC01600Q96MT4 127 aa3.73□□□□□ -1.81
SCUBE2-203ENST00000518447 DPH3P1Q9H4G8 78 aa3.73□□□□□ -1.81
SCUBE2-203ENST00000518447 VAX2Q9UIW0 290 aa3.73□□□□□ -1.81
SCUBE2-203ENST00000518447 ZFP30Q9Y2G7 519 aa3.73□□□□□ -1.81
SCUBE2-203ENST00000518447 FAT4Q6V0I7 4981 aa3.73□□□□□ -1.81
SCUBE2-203ENST00000518447 TRAV26-2A0A0B4J265 109 aa3.72□□□□□ -1.81
SCUBE2-203ENST00000518447 ARPC5O15511 151 aa3.72□□□□□ -1.81
SCUBE2-203ENST00000518447 IQCJQ1A5X6 159 aa3.72□□□□□ -1.81
SCUBE2-203ENST00000518447 WDR73Q6P4I2 378 aa3.72□□□□□ -1.81
SCUBE2-203ENST00000518447 FAM213BQ8TBF2 198 aa3.72□□□□□ -1.81
SCUBE2-203ENST00000518447 AP1S3Q96PC3 154 aa3.72□□□□□ -1.81
SCUBE2-203ENST00000518447 MLST8Q9BVC4 326 aa3.72□□□□□ -1.81
SCUBE2-203ENST00000518447 MED28Q9H204 178 aa3.72□□□□□ -1.81
SCUBE2-203ENST00000518447 CYTL1Q9NRR1 136 aa3.72□□□□□ -1.81
SCUBE2-203ENST00000518447 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.71□□□□□ -1.82
SCUBE2-203ENST00000518447 BORCS7-ASMTA0A0B4J1R7 106 aa3.71□□□□□ -1.82
SCUBE2-203ENST00000518447 A0A0J9YXV3 536 aa3.71□□□□□ -1.82
SCUBE2-203ENST00000518447 TMEM238LA0A1B0GVL6 79 aa3.71□□□□□ -1.82
SCUBE2-203ENST00000518447 IGKV2-29A2NJV5 120 aaPredicted RBP3.71□□□□□ -1.82
SCUBE2-203ENST00000518447 OR5AL1P0C617 328 aa3.71□□□□□ -1.82
SCUBE2-203ENST00000518447 SMIM17P0DL12 118 aa3.71□□□□□ -1.82
SCUBE2-203ENST00000518447 SULT1A2P50226 295 aa3.71□□□□□ -1.82
SCUBE2-203ENST00000518447 KRTAP10-7P60409 375 aaPredicted RBP3.71□□□□□ -1.82
SCUBE2-203ENST00000518447 C7orf33Q8WU49 177 aa3.71□□□□□ -1.82
SCUBE2-203ENST00000518447 RPL39LQ96EH5 51 aaKnown RBP3.71□□□□□ -1.82
SCUBE2-203ENST00000518447 TMEM243Q9BU79 118 aa3.71□□□□□ -1.82
SCUBE2-203ENST00000518447 AP5S1Q9NUS5 200 aa3.71□□□□□ -1.82
SCUBE2-203ENST00000518447 NDUFA13Q9P0J0 144 aa3.71□□□□□ -1.82
SCUBE2-203ENST00000518447 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.7□□□□□ -1.82
SCUBE2-203ENST00000518447 RAB19A4D1S5 217 aa3.7□□□□□ -1.82
SCUBE2-203ENST00000518447 GIPP09681 153 aaPredicted RBP3.7□□□□□ -1.82
SCUBE2-203ENST00000518447 IGLC6P0CF74 106 aa3.7□□□□□ -1.82
SCUBE2-203ENST00000518447 RPL35P42766 123 aaKnown RBP3.7□□□□□ -1.82
SCUBE2-203ENST00000518447 AMTP48728 403 aa3.7□□□□□ -1.82
SCUBE2-203ENST00000518447 FOXA3P55318 350 aaPredicted RBP3.7□□□□□ -1.82
SCUBE2-203ENST00000518447 KRTAP10-8P60410 259 aa3.7□□□□□ -1.82
SCUBE2-203ENST00000518447 CCL20P78556 96 aa3.7□□□□□ -1.82
SCUBE2-203ENST00000518447 CENPWQ5EE01 88 aa3.7□□□□□ -1.82
SCUBE2-203ENST00000518447 Q6ZNX1 250 aa3.7□□□□□ -1.82
SCUBE2-203ENST00000518447 LINC00299Q6ZSB3 139 aa3.7□□□□□ -1.82
SCUBE2-203ENST00000518447 BAGE2Q86Y30 109 aa3.7□□□□□ -1.82
SCUBE2-203ENST00000518447 CLRN3Q8NCR9 226 aa3.7□□□□□ -1.82
SCUBE2-203ENST00000518447 SFT2D1Q8WV19 159 aa3.7□□□□□ -1.82
SCUBE2-203ENST00000518447 CHCHD10Q8WYQ3 142 aaPredicted RBP3.7□□□□□ -1.82
SCUBE2-203ENST00000518447 TRBV20OR9-2A0A075B6H5 130 aa3.69□□□□□ -1.82
SCUBE2-203ENST00000518447 H7C1H1 209 aa3.69□□□□□ -1.82
SCUBE2-203ENST00000518447 UBE2L6O14933 153 aa3.69□□□□□ -1.82
SCUBE2-203ENST00000518447 NDUFS6O75380 124 aaKnown RBP3.69□□□□□ -1.82
SCUBE2-203ENST00000518447 RPS10P46783 165 aaKnown RBP3.69□□□□□ -1.82
SCUBE2-203ENST00000518447 XCL1P47992 114 aa3.69□□□□□ -1.82
SCUBE2-203ENST00000518447 PKIAP61925 76 aa3.69□□□□□ -1.82
SCUBE2-203ENST00000518447 FOXI1Q12951 378 aa3.69□□□□□ -1.82
SCUBE2-203ENST00000518447 RASL11AQ6T310 242 aa3.69□□□□□ -1.82
SCUBE2-203ENST00000518447 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.69□□□□□ -1.82
SCUBE2-203ENST00000518447 FER1L6-AS1Q8NA97 138 aa3.69□□□□□ -1.82
SCUBE2-203ENST00000518447 OR2D3Q8NGH3 330 aa3.69□□□□□ -1.82
SCUBE2-203ENST00000518447 RNF185Q96GF1 192 aa3.69□□□□□ -1.82
SCUBE2-203ENST00000518447 NKX6-2Q9C056 277 aaPredicted RBP3.69□□□□□ -1.82
SCUBE2-203ENST00000518447 GVQW2A0A096LPI5 108 aaPredicted RBP3.68□□□□□ -1.82
SCUBE2-203ENST00000518447 TRAV8-4A0A0B4J246 113 aa3.68□□□□□ -1.82
SCUBE2-203ENST00000518447 PFDN1O60925 122 aa3.68□□□□□ -1.82
SCUBE2-203ENST00000518447 P01737 135 aa3.68□□□□□ -1.82
SCUBE2-203ENST00000518447 CXCL1P09341 107 aa3.68□□□□□ -1.82
SCUBE2-203ENST00000518447 TMEM97Q5BJF2 176 aa3.68□□□□□ -1.82
SCUBE2-203ENST00000518447 RNASEKQ6P5S7 137 aaKnown RBP3.68□□□□□ -1.82
SCUBE2-203ENST00000518447 LYZL1Q6UWQ5 148 aa3.68□□□□□ -1.82
SCUBE2-203ENST00000518447 TMUB2Q71RG4 321 aa3.68□□□□□ -1.82
SCUBE2-203ENST00000518447 KCNRGQ8N5I3 272 aa3.68□□□□□ -1.82
SCUBE2-203ENST00000518447 GATD1Q8NB37 220 aa3.68□□□□□ -1.82
SCUBE2-203ENST00000518447 GNG13Q9P2W3 67 aa3.68□□□□□ -1.82
SCUBE2-203ENST00000518447 A0A1B0GUV1 79 aa3.67□□□□□ -1.82
SCUBE2-203ENST00000518447 A0A1W2PNN7 141 aa3.67□□□□□ -1.82
SCUBE2-203ENST00000518447 C19orf71A6NCJ1 209 aa3.67□□□□□ -1.82
SCUBE2-203ENST00000518447 CCL25O15444 150 aa3.67□□□□□ -1.82
SCUBE2-203ENST00000518447 BCL2P10415 239 aa3.67□□□□□ -1.82
SCUBE2-203ENST00000518447 NTF3P20783 257 aa3.67□□□□□ -1.82
SCUBE2-203ENST00000518447 SRSF9Q13242 221 aaKnown RBP eCLIP3.67□□□□□ -1.82
SCUBE2-203ENST00000518447 COTL1Q14019 142 aa3.67□□□□□ -1.82
SCUBE2-203ENST00000518447 RNASE13Q5GAN3 156 aaKnown RBP3.67□□□□□ -1.82
SCUBE2-203ENST00000518447 KRTAP11-1Q8IUC1 163 aa3.67□□□□□ -1.82
SCUBE2-203ENST00000518447 NIT2Q9NQR4 276 aa3.67□□□□□ -1.82
SCUBE2-203ENST00000518447 FGF6P10767 208 aa3.66□□□□□ -1.82
SCUBE2-203ENST00000518447 GAGE2BQ13066 116 aa3.66□□□□□ -1.82
SCUBE2-203ENST00000518447 AMMECR1LQ6DCA0 310 aa3.66□□□□□ -1.82
SCUBE2-203ENST00000518447 REG3GQ6UW15 175 aa3.66□□□□□ -1.82
SCUBE2-203ENST00000518447 SPINK6Q6UWN8 80 aa3.66□□□□□ -1.82
SCUBE2-203ENST00000518447 PRR26Q8N8Z3 221 aa3.66□□□□□ -1.82
SCUBE2-203ENST00000518447 MBD3L1Q8WWY6 194 aa3.66□□□□□ -1.82
SCUBE2-203ENST00000518447 PGLYRP4Q96LB8 373 aa3.66□□□□□ -1.82
SCUBE2-203ENST00000518447 CARD19Q96LW7 228 aa3.66□□□□□ -1.82
SCUBE2-203ENST00000518447 TCEAL7Q9BRU2 100 aa3.66□□□□□ -1.82
SCUBE2-203ENST00000518447 RNASE7Q9H1E1 156 aaKnown RBP3.66□□□□□ -1.82
SCUBE2-203ENST00000518447 FAM168BA1KXE4 195 aa3.65□□□□□ -1.83
SCUBE2-203ENST00000518447 K7EN84 100 aa3.65□□□□□ -1.83
SCUBE2-203ENST00000518447 APCSP02743 223 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms